RNA–Protein interactions for RNA: ENST00000357164.3

GM2A-201, Transcript of GM2 ganglioside activator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GM2A, Length 3,896 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GM2A-201ENST00000357164 KIF9Q9HAQ2 790 aa9.49□□□□□ -0.89
GM2A-201ENST00000357164 SKAP2O75563 359 aaPredicted RBP9.48□□□□□ -0.89
GM2A-201ENST00000357164 EEF1GP26641 437 aaKnown RBP9.48□□□□□ -0.89
GM2A-201ENST00000357164 ATP2C1P98194 919 aaPredicted RBP9.48□□□□□ -0.89
GM2A-201ENST00000357164 KCNB1Q14721 858 aa9.48□□□□□ -0.89
GM2A-201ENST00000357164 KIAA0753Q2KHM9 967 aa9.48□□□□□ -0.89
GM2A-201ENST00000357164 SPDYCQ5MJ68 293 aa9.48□□□□□ -0.89
GM2A-201ENST00000357164 FAM210AQ96ND0 272 aa9.48□□□□□ -0.89
GM2A-201ENST00000357164 PSMD1Q99460 953 aa9.48□□□□□ -0.89
GM2A-201ENST00000357164 MTA3Q9BTC8 594 aa9.48□□□□□ -0.89
GM2A-201ENST00000357164 VPS54Q9P1Q0 977 aa9.48□□□□□ -0.89
GM2A-201ENST00000357164 NUP98P52948 1817 aa9.48□□□□□ -0.89
GM2A-201ENST00000357164 BAZ2AQ9UIF9 1905 aaKnown RBP9.48□□□□□ -0.89
GM2A-201ENST00000357164 DCDC2CA8MYV0 355 aa9.48□□□□□ -0.89
GM2A-201ENST00000357164 COQ9O75208 318 aa9.48□□□□□ -0.89
GM2A-201ENST00000357164 CCT6AP40227 531 aaKnown RBP9.48□□□□□ -0.89
GM2A-201ENST00000357164 ATP1A2P50993 1020 aa9.48□□□□□ -0.89
GM2A-201ENST00000357164 NFRKBQ6P4R8 1299 aa9.48□□□□□ -0.89
GM2A-201ENST00000357164 MTHFD1LQ6UB35 978 aa9.48□□□□□ -0.89
GM2A-201ENST00000357164 ARMC9Q7Z3E5 817 aa9.48□□□□□ -0.89
GM2A-201ENST00000357164 USHBP1Q8N6Y0 703 aa9.48□□□□□ -0.89
GM2A-201ENST00000357164 OLIG1Q8TAK6 271 aa9.48□□□□□ -0.89
GM2A-201ENST00000357164 BAP1Q92560 729 aa9.48□□□□□ -0.89
GM2A-201ENST00000357164 SYMPKQ92797 1274 aaKnown RBP9.48□□□□□ -0.89
GM2A-201ENST00000357164 TMEM87BQ96K49 555 aa9.48□□□□□ -0.89
GM2A-201ENST00000357164 CAPZA3Q96KX2 299 aa9.48□□□□□ -0.89
GM2A-201ENST00000357164 SMARCAL1Q9NZC9 954 aa9.48□□□□□ -0.89
GM2A-201ENST00000357164 CTNND2Q9UQB3 1225 aa9.48□□□□□ -0.89
GM2A-201ENST00000357164 COL4A1P02462 1669 aa9.48□□□□□ -0.89
GM2A-201ENST00000357164 FAM205CA6NFA0 338 aa9.48□□□□□ -0.89
GM2A-201ENST00000357164 ASAP2O43150 1006 aa9.48□□□□□ -0.89
GM2A-201ENST00000357164 RTN3O95197 1032 aaPredicted RBP9.48□□□□□ -0.89
GM2A-201ENST00000357164 PARP1P09874 1014 aaKnown RBP9.48□□□□□ -0.89
GM2A-201ENST00000357164 PRCPP42785 496 aa9.48□□□□□ -0.89
GM2A-201ENST00000357164 KLK7P49862 253 aa9.48□□□□□ -0.89
GM2A-201ENST00000357164 KRT83P78385 493 aa9.48□□□□□ -0.89
GM2A-201ENST00000357164 NR5A1Q13285 461 aa9.48□□□□□ -0.89
GM2A-201ENST00000357164 SCFD2Q8WU76 684 aa9.48□□□□□ -0.89
GM2A-201ENST00000357164 NSMCE1Q8WV22 266 aa9.48□□□□□ -0.89
GM2A-201ENST00000357164 AZIN2Q96A70 460 aa9.48□□□□□ -0.89
GM2A-201ENST00000357164 ATP8B3O60423 1300 aa9.47□□□□□ -0.89
GM2A-201ENST00000357164 M0R2N6 131 aa9.47□□□□□ -0.89
GM2A-201ENST00000357164 SNUPNO95149 360 aaKnown RBP9.47□□□□□ -0.89
GM2A-201ENST00000357164 PLEKP08567 350 aaPredicted RBP9.47□□□□□ -0.89
GM2A-201ENST00000357164 RARAP10276 462 aa9.47□□□□□ -0.89
GM2A-201ENST00000357164 METAP2P50579 478 aaKnown RBP eCLIP9.47□□□□□ -0.89
GM2A-201ENST00000357164 ITIH4Q14624 930 aa9.47□□□□□ -0.89
GM2A-201ENST00000357164 KCTD16Q68DU8 428 aa9.47□□□□□ -0.89
GM2A-201ENST00000357164 TRIM58Q8NG06 486 aa9.47□□□□□ -0.89
GM2A-201ENST00000357164 WHAMMQ8TF30 809 aa9.47□□□□□ -0.89
GM2A-201ENST00000357164 CNKSR2Q8WXI2 1034 aa9.47□□□□□ -0.89
GM2A-201ENST00000357164 APPBP2Q92624 585 aa9.47□□□□□ -0.89
GM2A-201ENST00000357164 MTMR8Q96EF0 704 aa9.47□□□□□ -0.89
GM2A-201ENST00000357164 SLX1AQ9BQ83 275 aa9.47□□□□□ -0.89
GM2A-201ENST00000357164 TBC1D30Q9Y2I9 924 aa9.47□□□□□ -0.89
GM2A-201ENST00000357164 LRRC42Q9Y546 428 aa9.47□□□□□ -0.89
GM2A-201ENST00000357164 GRID2IPA4D2P6 1211 aa9.47□□□□□ -0.89
GM2A-201ENST00000357164 SIGLEC16A6NMB1 481 aa9.47□□□□□ -0.89
GM2A-201ENST00000357164 H7C1D1 291 aa9.47□□□□□ -0.89
GM2A-201ENST00000357164 CDKL5O76039 1030 aa9.47□□□□□ -0.89
GM2A-201ENST00000357164 HSD17B3P37058 310 aa9.47□□□□□ -0.89
GM2A-201ENST00000357164 STX17P56962 302 aa9.47□□□□□ -0.89
GM2A-201ENST00000357164 RWDD2BP57060 319 aa9.47□□□□□ -0.89
GM2A-201ENST00000357164 ZBED6P86452 979 aa9.47□□□□□ -0.89
GM2A-201ENST00000357164 SPAG1Q07617 926 aa9.47□□□□□ -0.89
GM2A-201ENST00000357164 IMMTQ16891 758 aaKnown RBP9.47□□□□□ -0.89
GM2A-201ENST00000357164 FILIP1LQ4L180 1135 aa9.47□□□□□ -0.89
GM2A-201ENST00000357164 CRACR2BQ8N4Y2 399 aaPredicted RBP9.47□□□□□ -0.89
GM2A-201ENST00000357164 CCDC43Q96MW1 224 aaKnown RBP9.47□□□□□ -0.89
GM2A-201ENST00000357164 NEUROD6Q96NK8 337 aa9.47□□□□□ -0.89
GM2A-201ENST00000357164 ISCUQ9H1K1 167 aa9.47□□□□□ -0.89
GM2A-201ENST00000357164 TAF1DQ9H5J8 278 aaPredicted RBP9.47□□□□□ -0.89
GM2A-201ENST00000357164 POLD4Q9HCU8 107 aa9.47□□□□□ -0.89
GM2A-201ENST00000357164 TAB2Q9NYJ8 693 aa9.47□□□□□ -0.89
GM2A-201ENST00000357164 ZNFX1Q9P2E3 1918 aaKnown RBP9.47□□□□□ -0.89
GM2A-201ENST00000357164 EPHB6O15197 1021 aa9.47□□□□□ -0.89
GM2A-201ENST00000357164 ZFYP08048 801 aaPredicted RBP9.47□□□□□ -0.89
GM2A-201ENST00000357164 CWF19L1Q69YN2 538 aaKnown RBP9.47□□□□□ -0.89
GM2A-201ENST00000357164 DIS3L2Q8IYB7 885 aaKnown RBP9.47□□□□□ -0.89
GM2A-201ENST00000357164 VGLL2Q8N8G2 317 aa9.47□□□□□ -0.89
GM2A-201ENST00000357164 LPIN2Q92539 896 aa9.47□□□□□ -0.89
GM2A-201ENST00000357164 ARHGEF3Q9NR81 526 aa9.47□□□□□ -0.89
GM2A-201ENST00000357164 PANK4Q9NVE7 773 aa9.47□□□□□ -0.89
GM2A-201ENST00000357164 RNF14Q9UBS8 474 aa9.47□□□□□ -0.89
GM2A-201ENST00000357164 A0A1B0GUA9 196 aa9.46□□□□□ -0.89
GM2A-201ENST00000357164 BTNL10A8MVZ5 291 aa9.46□□□□□ -0.89
GM2A-201ENST00000357164 ABLIM1O14639 778 aa9.46□□□□□ -0.89
GM2A-201ENST00000357164 ADAMTS3O15072 1205 aa9.46□□□□□ -0.89
GM2A-201ENST00000357164 KRT86O43790 486 aa9.46□□□□□ -0.89
GM2A-201ENST00000357164 ANP32DO95626 131 aa9.46□□□□□ -0.89
GM2A-201ENST00000357164 TCP1P17987 556 aaKnown RBP9.46□□□□□ -0.89
GM2A-201ENST00000357164 SLMAPQ14BN4 828 aa9.46□□□□□ -0.89
GM2A-201ENST00000357164 AGAP11Q8TF27 550 aa9.46□□□□□ -0.89
GM2A-201ENST00000357164 FAM136AQ96C01 138 aa9.46□□□□□ -0.89
GM2A-201ENST00000357164 TSGA10Q9BZW7 698 aa9.46□□□□□ -0.89
GM2A-201ENST00000357164 MTFR1LQ9H019 292 aa9.46□□□□□ -0.89
GM2A-201ENST00000357164 VPS16Q9H269 839 aa9.46□□□□□ -0.89
GM2A-201ENST00000357164 EPB41L4AQ9HCS5 686 aaPredicted RBP9.46□□□□□ -0.89
GM2A-201ENST00000357164 COL24A1Q17RW2 1714 aa9.46□□□□□ -0.89
GM2A-201ENST00000357164 TNRC6CQ9HCJ0 1690 aaKnown RBP9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms