RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 SAMM50Q9Y512 469 aa7.16□□□□□ -1.26
VPS13B-202ENST00000357162 SLC12A2P55011 1212 aa7.15□□□□□ -1.26
VPS13B-202ENST00000357162 RWDD2BP57060 319 aa7.15□□□□□ -1.26
VPS13B-202ENST00000357162 FAM192AQ9GZU8 254 aa7.15□□□□□ -1.26
VPS13B-202ENST00000357162 TLDC2A0PJX2 215 aa7.15□□□□□ -1.26
VPS13B-202ENST00000357162 F8W8V4 182 aa7.15□□□□□ -1.26
VPS13B-202ENST00000357162 SATB1Q01826 763 aa7.15□□□□□ -1.26
VPS13B-202ENST00000357162 DCUN1D2Q6PH85 259 aa7.15□□□□□ -1.26
VPS13B-202ENST00000357162 N4BP2L2Q92802 583 aaPredicted RBP7.15□□□□□ -1.26
VPS13B-202ENST00000357162 SYDE1Q6ZW31 735 aaPredicted RBP7.15□□□□□ -1.26
VPS13B-202ENST00000357162 DTX3LQ8TDB6 740 aa7.15□□□□□ -1.26
VPS13B-202ENST00000357162 NONOQ15233 471 aaKnown RBP eCLIP7.15□□□□□ -1.26
VPS13B-202ENST00000357162 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.15□□□□□ -1.26
VPS13B-202ENST00000357162 ATXN2Q99700 1313 aaKnown RBP7.15□□□□□ -1.26
VPS13B-202ENST00000357162 PFKFB1P16118 471 aa7.15□□□□□ -1.26
VPS13B-202ENST00000357162 CCND1P24385 295 aa7.15□□□□□ -1.26
VPS13B-202ENST00000357162 CENPUQ71F23 418 aa7.15□□□□□ -1.26
VPS13B-202ENST00000357162 CIAO1O76071 339 aa7.15□□□□□ -1.26
VPS13B-202ENST00000357162 ACTN1P12814 892 aa7.15□□□□□ -1.26
VPS13B-202ENST00000357162 FBXO38Q6PIJ6 1188 aa7.15□□□□□ -1.26
VPS13B-202ENST00000357162 CCDC117Q8IWD4 279 aaPredicted RBP7.15□□□□□ -1.26
VPS13B-202ENST00000357162 CTAGE3PQ8IX95 158 aa7.15□□□□□ -1.26
VPS13B-202ENST00000357162 EIF2S1P05198 315 aaKnown RBP7.15□□□□□ -1.27
VPS13B-202ENST00000357162 GARSP41250 739 aaKnown RBP7.15□□□□□ -1.27
VPS13B-202ENST00000357162 FSCBQ5H9T9 825 aa7.15□□□□□ -1.27
VPS13B-202ENST00000357162 C2CD5Q86YS7 1000 aa7.15□□□□□ -1.27
VPS13B-202ENST00000357162 RHOT2Q8IXI1 618 aa7.15□□□□□ -1.27
VPS13B-202ENST00000357162 CCDC8Q9H0W5 538 aaPredicted RBP7.15□□□□□ -1.27
VPS13B-202ENST00000357162 PHF8Q9UPP1 1060 aa7.15□□□□□ -1.27
VPS13B-202ENST00000357162 GOLGA8IPA6NC78 632 aa7.15□□□□□ -1.27
VPS13B-202ENST00000357162 FRMD8Q9BZ67 464 aaPredicted RBP7.15□□□□□ -1.27
VPS13B-202ENST00000357162 PLCE1Q9P212 2302 aa7.15□□□□□ -1.27
VPS13B-202ENST00000357162 E9PMD0 336 aa7.15□□□□□ -1.27
VPS13B-202ENST00000357162 GRM1Q13255 1194 aa7.15□□□□□ -1.27
VPS13B-202ENST00000357162 SPARCL1Q14515 664 aa7.15□□□□□ -1.27
VPS13B-202ENST00000357162 KRT40Q6A162 431 aa7.15□□□□□ -1.27
VPS13B-202ENST00000357162 GSDMBQ8TAX9 411 aa7.15□□□□□ -1.27
VPS13B-202ENST00000357162 FNBP1Q96RU3 617 aa7.15□□□□□ -1.27
VPS13B-202ENST00000357162 MYD88Q99836 296 aa7.15□□□□□ -1.27
VPS13B-202ENST00000357162 CUL3Q13618 768 aa7.15□□□□□ -1.27
VPS13B-202ENST00000357162 CADPS2Q86UW7 1296 aa7.15□□□□□ -1.27
VPS13B-202ENST00000357162 MAP4K1Q92918 833 aa7.14□□□□□ -1.27
VPS13B-202ENST00000357162 RNF216Q9NWF9 866 aaPredicted RBP7.14□□□□□ -1.27
VPS13B-202ENST00000357162 STXBP3O00186 592 aa7.14□□□□□ -1.27
VPS13B-202ENST00000357162 KRT38O76015 456 aa7.14□□□□□ -1.27
VPS13B-202ENST00000357162 KLHDC4Q8TBB5 520 aa7.14□□□□□ -1.27
VPS13B-202ENST00000357162 ANKRD7Q92527 254 aa7.14□□□□□ -1.27
VPS13B-202ENST00000357162 PBRM1Q86U86 1689 aa7.14□□□□□ -1.27
VPS13B-202ENST00000357162 MMEP08473 750 aa7.14□□□□□ -1.27
VPS13B-202ENST00000357162 HDAC4P56524 1084 aa7.14□□□□□ -1.27
VPS13B-202ENST00000357162 AP1B1Q10567 949 aa7.14□□□□□ -1.27
VPS13B-202ENST00000357162 PLBD2Q8NHP8 589 aa7.14□□□□□ -1.27
VPS13B-202ENST00000357162 PRPF31Q8WWY3 499 aaKnown RBP7.14□□□□□ -1.27
VPS13B-202ENST00000357162 ARHGAP26Q9UNA1 814 aa7.14□□□□□ -1.27
VPS13B-202ENST00000357162 GOLGA8JA6NMD2 632 aa7.14□□□□□ -1.27
VPS13B-202ENST00000357162 CFAP61Q8NHU2 1237 aa7.14□□□□□ -1.27
VPS13B-202ENST00000357162 GPT2Q8TD30 523 aa7.14□□□□□ -1.27
VPS13B-202ENST00000357162 POLEQ07864 2286 aa7.14□□□□□ -1.27
VPS13B-202ENST00000357162 CCT6AP40227 531 aaKnown RBP7.14□□□□□ -1.27
VPS13B-202ENST00000357162 NBPF5PQ86XG9 351 aaPredicted RBP7.14□□□□□ -1.27
VPS13B-202ENST00000357162 DIS3L2Q8IYB7 885 aaKnown RBP7.14□□□□□ -1.27
VPS13B-202ENST00000357162 AGGF1Q8N302 714 aaeCLIP7.14□□□□□ -1.272e-7■■□□□ 13.7
VPS13B-202ENST00000357162 METTL22Q9BUU2 404 aaPredicted RBP7.14□□□□□ -1.27
VPS13B-202ENST00000357162 AGTPBP1Q9UPW5 1226 aa7.14□□□□□ -1.27
VPS13B-202ENST00000357162 ARHGEF9O43307 516 aa7.14□□□□□ -1.27
VPS13B-202ENST00000357162 SPAG7O75391 227 aa7.14□□□□□ -1.27
VPS13B-202ENST00000357162 NECAB1Q8N987 351 aa7.14□□□□□ -1.27
VPS13B-202ENST00000357162 COL4A3BPQ9Y5P4 624 aa7.14□□□□□ -1.27
VPS13B-202ENST00000357162 SNX14Q9Y5W7 946 aa7.14□□□□□ -1.27
VPS13B-202ENST00000357162 PCDH11XQ9BZA7 1347 aa7.14□□□□□ -1.27
VPS13B-202ENST00000357162 PCDH11YQ9BZA8 1340 aa7.14□□□□□ -1.27
VPS13B-202ENST00000357162 ESRRBO95718 433 aa7.14□□□□□ -1.27
VPS13B-202ENST00000357162 SLC4A4Q9Y6R1 1079 aa7.14□□□□□ -1.27
VPS13B-202ENST00000357162 KRT16P08779 473 aa7.14□□□□□ -1.27
VPS13B-202ENST00000357162 MYOCDQ8IZQ8 938 aa7.14□□□□□ -1.27
VPS13B-202ENST00000357162 COG1Q8WTW3 980 aa7.14□□□□□ -1.27
VPS13B-202ENST00000357162 PCDHA7Q9UN72 937 aa7.14□□□□□ -1.27
VPS13B-202ENST00000357162 CALCRLQ16602 461 aa7.14□□□□□ -1.27
VPS13B-202ENST00000357162 RAB20Q9NX57 234 aa7.14□□□□□ -1.27
VPS13B-202ENST00000357162 ATP8A2Q9NTI2 1148 aa7.14□□□□□ -1.27
VPS13B-202ENST00000357162 MPP6Q9NZW5 540 aa7.14□□□□□ -1.27
VPS13B-202ENST00000357162 ATP7AQ04656 1500 aa7.14□□□□□ -1.27
VPS13B-202ENST00000357162 A0A1W2PP64 1363 aa7.14□□□□□ -1.27
VPS13B-202ENST00000357162 SPAG6O75602 509 aa7.14□□□□□ -1.27
VPS13B-202ENST00000357162 CDR2Q01850 454 aa7.14□□□□□ -1.27
VPS13B-202ENST00000357162 PROSER2Q86WR7 435 aaPredicted RBP7.14□□□□□ -1.27
VPS13B-202ENST00000357162 MRPL47Q9HD33 250 aaKnown RBP7.14□□□□□ -1.27
VPS13B-202ENST00000357162 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.14□□□□□ -1.27
VPS13B-202ENST00000357162 ABCA8O94911 1581 aa7.13□□□□□ -1.27
VPS13B-202ENST00000357162 MAGEB6P1A0A0J9YX57 407 aa7.13□□□□□ -1.27
VPS13B-202ENST00000357162 THUMPD2Q9BTF0 503 aaKnown RBP7.13□□□□□ -1.27
VPS13B-202ENST00000357162 MED14O60244 1454 aa7.13□□□□□ -1.27
VPS13B-202ENST00000357162 APOA1P02647 267 aa7.13□□□□□ -1.27
VPS13B-202ENST00000357162 PPP2R5DQ14738 602 aa7.13□□□□□ -1.27
VPS13B-202ENST00000357162 ANO5Q75V66 913 aa7.13□□□□□ -1.27
VPS13B-202ENST00000357162 CDC37L1Q7L3B6 337 aa7.13□□□□□ -1.27
VPS13B-202ENST00000357162 PDIK1LQ8N165 341 aa7.13□□□□□ -1.27
VPS13B-202ENST00000357162 LRRC37BQ96QE4 947 aa7.13□□□□□ -1.27
VPS13B-202ENST00000357162 HAUS7Q99871 368 aa7.13□□□□□ -1.27
VPS13B-202ENST00000357162 CHPF2Q9P2E5 772 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms