RNA–Protein interactions for RNA: ENST00000356162.5

CNOT4-202, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 5 BASIC

Gene CNOT4, Length 2,594 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-202ENST00000356162 SYDE2Q5VT97 1194 aa4.64□□□□□ -1.67
CNOT4-202ENST00000356162 RIOX2Q8IUF8 465 aa4.64□□□□□ -1.67
CNOT4-202ENST00000356162 PRPF38AQ8NAV1 312 aaKnown RBP4.64□□□□□ -1.67
CNOT4-202ENST00000356162 TRIM47Q96LD4 638 aa4.64□□□□□ -1.67
CNOT4-202ENST00000356162 NEK1Q96PY6 1258 aa4.64□□□□□ -1.67
CNOT4-202ENST00000356162 ARHGAP39Q9C0H5 1083 aa4.64□□□□□ -1.67
CNOT4-202ENST00000356162 SPATC1LQ9H0A9 340 aa4.64□□□□□ -1.67
CNOT4-202ENST00000356162 FBXO28Q9NVF7 368 aa4.64□□□□□ -1.67
CNOT4-202ENST00000356162 BTBD7Q9P203 1132 aa4.64□□□□□ -1.67
CNOT4-202ENST00000356162 RBPJLQ9UBG7 517 aa4.64□□□□□ -1.67
CNOT4-202ENST00000356162 SRRDQ9UH36 339 aa4.64□□□□□ -1.67
CNOT4-202ENST00000356162 PNMA2Q9UL42 364 aa4.64□□□□□ -1.67
CNOT4-202ENST00000356162 ISY1Q9ULR0 285 aaKnown RBP4.64□□□□□ -1.67
CNOT4-202ENST00000356162 CTDP1Q9Y5B0 961 aaPredicted RBP4.64□□□□□ -1.67
CNOT4-202ENST00000356162 SNX14Q9Y5W7 946 aa4.64□□□□□ -1.67
CNOT4-202ENST00000356162 NID2Q14112 1375 aa4.64□□□□□ -1.67
CNOT4-202ENST00000356162 PLXNA1Q9UIW2 1896 aa4.64□□□□□ -1.67
CNOT4-202ENST00000356162 TMEM232C9JQI7 657 aa4.63□□□□□ -1.67
CNOT4-202ENST00000356162 VWA5AO00534 786 aa4.63□□□□□ -1.67
CNOT4-202ENST00000356162 TNPO2O14787 897 aaKnown RBP4.63□□□□□ -1.67
CNOT4-202ENST00000356162 ZBED4O75132 1171 aa4.63□□□□□ -1.67
CNOT4-202ENST00000356162 PSMA5P28066 241 aa4.63□□□□□ -1.67
CNOT4-202ENST00000356162 CTGFP29279 349 aa4.63□□□□□ -1.67
CNOT4-202ENST00000356162 LIFRP42702 1097 aa4.63□□□□□ -1.67
CNOT4-202ENST00000356162 IKQ13123 557 aaPredicted RBP4.63□□□□□ -1.67
CNOT4-202ENST00000356162 GRM4Q14833 912 aa4.63□□□□□ -1.67
CNOT4-202ENST00000356162 TKFCQ3LXA3 575 aa4.63□□□□□ -1.67
CNOT4-202ENST00000356162 TRAF7Q6Q0C0 670 aa4.63□□□□□ -1.67
CNOT4-202ENST00000356162 PLEKHH3Q7Z736 793 aa4.63□□□□□ -1.67
CNOT4-202ENST00000356162 COA7Q96BR5 231 aa4.63□□□□□ -1.67
CNOT4-202ENST00000356162 IL17RAQ96F46 866 aa4.63□□□□□ -1.67
CNOT4-202ENST00000356162 MAP3K14Q99558 947 aa4.63□□□□□ -1.67
CNOT4-202ENST00000356162 USP26Q9BXU7 913 aa4.63□□□□□ -1.67
CNOT4-202ENST00000356162 MCOLN1Q9GZU1 580 aa4.63□□□□□ -1.67
CNOT4-202ENST00000356162 LY9Q9HBG7 655 aa4.63□□□□□ -1.67
CNOT4-202ENST00000356162 SLC38A10Q9HBR0 1119 aa4.63□□□□□ -1.67
CNOT4-202ENST00000356162 CWC22Q9HCG8 908 aaKnown RBP4.63□□□□□ -1.67
CNOT4-202ENST00000356162 PCDHGC3Q9UN70 934 aa4.63□□□□□ -1.67
CNOT4-202ENST00000356162 PTPN22Q9Y2R2 807 aa4.63□□□□□ -1.67
CNOT4-202ENST00000356162 MYH6P13533 1939 aa4.63□□□□□ -1.67
CNOT4-202ENST00000356162 FRMPD2Q68DX3 1309 aaPredicted RBP4.63□□□□□ -1.67
CNOT4-202ENST00000356162 SLC15A5A6NIM6 579 aa4.63□□□□□ -1.67
CNOT4-202ENST00000356162 PARP1P09874 1014 aaKnown RBP4.63□□□□□ -1.67
CNOT4-202ENST00000356162 CALM1P0DP23 149 aa4.63□□□□□ -1.67
CNOT4-202ENST00000356162 CALM2P0DP24 149 aa4.63□□□□□ -1.67
CNOT4-202ENST00000356162 CALM3P0DP25 149 aa4.63□□□□□ -1.67
CNOT4-202ENST00000356162 RCAN1P53805 252 aa4.63□□□□□ -1.67
CNOT4-202ENST00000356162 ANAPC15P60006 121 aa4.63□□□□□ -1.67
CNOT4-202ENST00000356162 CAP1Q01518 475 aa4.63□□□□□ -1.67
CNOT4-202ENST00000356162 IRF5Q13568 498 aa4.63□□□□□ -1.67
CNOT4-202ENST00000356162 TMEM132BQ14DG7 1078 aa4.63□□□□□ -1.67
CNOT4-202ENST00000356162 C8orf34Q49A92 452 aa4.63□□□□□ -1.67
CNOT4-202ENST00000356162 COL13A1Q5TAT6 717 aaPredicted RBP4.63□□□□□ -1.67
CNOT4-202ENST00000356162 KCTD1Q719H9 257 aa4.63□□□□□ -1.67
CNOT4-202ENST00000356162 DHX32Q7L7V1 743 aaKnown RBP4.63□□□□□ -1.67
CNOT4-202ENST00000356162 RASGRP2Q7LDG7 609 aa4.63□□□□□ -1.67
CNOT4-202ENST00000356162 CATIPQ7Z7H3 387 aa4.63□□□□□ -1.67
CNOT4-202ENST00000356162 SGMS1Q86VZ5 419 aa4.63□□□□□ -1.67
CNOT4-202ENST00000356162 ZNF654Q8IZM8 581 aa4.63□□□□□ -1.67
CNOT4-202ENST00000356162 TNS4Q8IZW8 715 aa4.63□□□□□ -1.67
CNOT4-202ENST00000356162 ABRAQ8N0Z2 381 aa4.63□□□□□ -1.67
CNOT4-202ENST00000356162 TMTC2Q8N394 836 aa4.63□□□□□ -1.67
CNOT4-202ENST00000356162 IGDCC4Q8TDY8 1250 aa4.63□□□□□ -1.67
CNOT4-202ENST00000356162 SYMPKQ92797 1274 aaKnown RBP4.63□□□□□ -1.67
CNOT4-202ENST00000356162 KIFC2Q96AC6 838 aa4.63□□□□□ -1.67
CNOT4-202ENST00000356162 JAKMIP1Q96N16 626 aaKnown RBP4.63□□□□□ -1.67
CNOT4-202ENST00000356162 APBA2Q99767 749 aa4.63□□□□□ -1.67
CNOT4-202ENST00000356162 MOV10L1Q9BXT6 1211 aaKnown RBP4.63□□□□□ -1.67
CNOT4-202ENST00000356162 TEX13BQ9BXU2 312 aa4.63□□□□□ -1.67
CNOT4-202ENST00000356162 TM6SF1Q9BZW5 370 aa4.63□□□□□ -1.67
CNOT4-202ENST00000356162 RANBP17Q9H2T7 1088 aaKnown RBP4.63□□□□□ -1.67
CNOT4-202ENST00000356162 MROH8Q9H579 483 aa4.63□□□□□ -1.67
CNOT4-202ENST00000356162 PKD2L1Q9P0L9 805 aa4.63□□□□□ -1.67
CNOT4-202ENST00000356162 ZNF214Q9UL59 606 aaPredicted RBP4.63□□□□□ -1.67
CNOT4-202ENST00000356162 PTCH2Q9Y6C5 1203 aa4.63□□□□□ -1.67
CNOT4-202ENST00000356162 LCTP09848 1927 aa4.63□□□□□ -1.67
CNOT4-202ENST00000356162 FRMPD3Q5JV73 1810 aa4.63□□□□□ -1.67
CNOT4-202ENST00000356162 CCDC69A6NI79 296 aa4.62□□□□□ -1.67
CNOT4-202ENST00000356162 RPS6KB1P23443 525 aa4.62□□□□□ -1.67
CNOT4-202ENST00000356162 RGS2P41220 211 aa4.62□□□□□ -1.67
CNOT4-202ENST00000356162 EXOSC10Q01780 885 aaKnown RBP4.62□□□□□ -1.67
CNOT4-202ENST00000356162 PRKCZQ05513 592 aa4.62□□□□□ -1.67
CNOT4-202ENST00000356162 GRB14Q14449 540 aa4.62□□□□□ -1.67
CNOT4-202ENST00000356162 ADCK5Q3MIX3 580 aa4.62□□□□□ -1.67
CNOT4-202ENST00000356162 BLOC1S2Q6QNY1 142 aa4.62□□□□□ -1.67
CNOT4-202ENST00000356162 GPR142Q7Z601 462 aa4.62□□□□□ -1.67
CNOT4-202ENST00000356162 CCAR1Q8IX12 1150 aaKnown RBP4.62□□□□□ -1.67
CNOT4-202ENST00000356162 TRMT44Q8IYL2 757 aaKnown RBP4.62□□□□□ -1.67
CNOT4-202ENST00000356162 PORCNQ9H237 461 aa4.62□□□□□ -1.67
CNOT4-202ENST00000356162 FBXO40Q9UH90 709 aa4.62□□□□□ -1.67
CNOT4-202ENST00000356162 PRR12Q9ULL5 1215 aa4.62□□□□□ -1.67
CNOT4-202ENST00000356162 MTMR7Q9Y216 660 aa4.62□□□□□ -1.67
CNOT4-202ENST00000356162 IVNS1ABPQ9Y6Y0 642 aa4.62□□□□□ -1.67
CNOT4-202ENST00000356162 ZNFX1Q9P2E3 1918 aaKnown RBP4.62□□□□□ -1.67
CNOT4-202ENST00000356162 DOCK3Q8IZD9 2030 aa4.62□□□□□ -1.67
CNOT4-202ENST00000356162 PALM3A6NDB9 673 aaPredicted RBP4.62□□□□□ -1.67
CNOT4-202ENST00000356162 MOXD2PA6NHM9 499 aa4.62□□□□□ -1.67
CNOT4-202ENST00000356162 TNFRSF10AO00220 468 aa4.62□□□□□ -1.67
CNOT4-202ENST00000356162 CD2BP2O95400 341 aaKnown RBP4.62□□□□□ -1.67
CNOT4-202ENST00000356162 ICAM1P05362 532 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms