RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 PARP1P09874 1014 aaKnown RBP19.56■□□□□ 0.72
PDLIM7-201ENST00000355572 EPHB4P54760 987 aa19.56■□□□□ 0.72
PDLIM7-201ENST00000355572 FAAP100Q0VG06 881 aa19.56■□□□□ 0.72
PDLIM7-201ENST00000355572 CCDC178Q5BJE1 867 aa19.56■□□□□ 0.72
PDLIM7-201ENST00000355572 C9orf50Q5SZB4 431 aa19.56■□□□□ 0.72
PDLIM7-201ENST00000355572 TLK2Q86UE8 772 aa19.56■□□□□ 0.72
PDLIM7-201ENST00000355572 ESYT1Q9BSJ8 1104 aa19.56■□□□□ 0.72
PDLIM7-201ENST00000355572 STARD7Q9NQZ5 370 aa19.56■□□□□ 0.72
PDLIM7-201ENST00000355572 GRIN2DO15399 1336 aa19.55■□□□□ 0.72
PDLIM7-201ENST00000355572 CYTH3O43739 400 aa19.55■□□□□ 0.72
PDLIM7-201ENST00000355572 EDNRBP24530 442 aa19.55■□□□□ 0.72
PDLIM7-201ENST00000355572 NT5C2P49902 561 aa19.55■□□□□ 0.72
PDLIM7-201ENST00000355572 CDK7P50613 346 aa19.55■□□□□ 0.72
PDLIM7-201ENST00000355572 GNASQ5JWF2 1037 aa19.55■□□□□ 0.72
PDLIM7-201ENST00000355572 MTMR8Q96EF0 704 aa19.55■□□□□ 0.72
PDLIM7-201ENST00000355572 DOCK5Q9H7D0 1870 aa19.55■□□□□ 0.72
PDLIM7-201ENST00000355572 PALM3A6NDB9 673 aaPredicted RBP19.54■□□□□ 0.72
PDLIM7-201ENST00000355572 MOXD2PA6NHM9 499 aa19.54■□□□□ 0.72
PDLIM7-201ENST00000355572 RBAK-RBAKDNI3L0D1 243 aa19.54■□□□□ 0.72
PDLIM7-201ENST00000355572 GRM4Q14833 912 aa19.54■□□□□ 0.72
PDLIM7-201ENST00000355572 CXCL17Q6UXB2 119 aa19.54■□□□□ 0.72
PDLIM7-201ENST00000355572 IGDCC4Q8TDY8 1250 aa19.54■□□□□ 0.72
PDLIM7-201ENST00000355572 COPS5Q92905 334 aa19.54■□□□□ 0.72
PDLIM7-201ENST00000355572 TAAR1Q96RJ0 339 aa19.54■□□□□ 0.72
PDLIM7-201ENST00000355572 SCN10AQ9Y5Y9 1956 aa19.53■□□□□ 0.72
PDLIM7-201ENST00000355572 RBM47A0AV96 593 aaKnown RBP19.53■□□□□ 0.72
PDLIM7-201ENST00000355572 KLRF2D3W0D1 207 aa19.53■□□□□ 0.72
PDLIM7-201ENST00000355572 IFIT3O14879 490 aaKnown RBP19.53■□□□□ 0.72
PDLIM7-201ENST00000355572 DYNC1LI2O43237 492 aaPredicted RBP19.53■□□□□ 0.72
PDLIM7-201ENST00000355572 ARIH2O95376 493 aa19.53■□□□□ 0.72
PDLIM7-201ENST00000355572 CLTBP09497 229 aa19.53■□□□□ 0.72
PDLIM7-201ENST00000355572 SHHQ15465 462 aa19.53■□□□□ 0.72
PDLIM7-201ENST00000355572 LRIT3Q3SXY7 679 aa19.53■□□□□ 0.72
PDLIM7-201ENST00000355572 KIAA1211Q6ZU35 1233 aa19.53■□□□□ 0.72
PDLIM7-201ENST00000355572 NOL8Q76FK4 1167 aaKnown RBP19.53■□□□□ 0.72
PDLIM7-201ENST00000355572 Q7L0L9 218 aa19.53■□□□□ 0.72
PDLIM7-201ENST00000355572 CENPQQ7L2Z9 268 aaPredicted RBP19.53■□□□□ 0.72
PDLIM7-201ENST00000355572 ANKRD33Q7Z3H0 272 aa19.53■□□□□ 0.72
PDLIM7-201ENST00000355572 NCOA7Q8NI08 942 aa19.53■□□□□ 0.72
PDLIM7-201ENST00000355572 SYTL5Q8TDW5 730 aaPredicted RBP19.53■□□□□ 0.72
PDLIM7-201ENST00000355572 PPP1R13LQ8WUF5 828 aa19.53■□□□□ 0.72
PDLIM7-201ENST00000355572 MYL10Q9BUA6 226 aa19.53■□□□□ 0.72
PDLIM7-201ENST00000355572 VTA1Q9NP79 307 aa19.53■□□□□ 0.72
PDLIM7-201ENST00000355572 SLC27A2O14975 620 aa19.52■□□□□ 0.72
PDLIM7-201ENST00000355572 KIAA0355O15063 1070 aa19.52■□□□□ 0.72
PDLIM7-201ENST00000355572 PSMC6P62333 389 aa19.52■□□□□ 0.72
PDLIM7-201ENST00000355572 TROAPQ12815 778 aa19.52■□□□□ 0.72
PDLIM7-201ENST00000355572 IQSEC1Q6DN90 963 aa19.52■□□□□ 0.72
PDLIM7-201ENST00000355572 SCN5AQ14524 2016 aa19.52■□□□□ 0.72
PDLIM7-201ENST00000355572 ABCB11O95342 1321 aa19.51■□□□□ 0.71
PDLIM7-201ENST00000355572 DHX16O60231 1041 aaKnown RBP19.51■□□□□ 0.71
PDLIM7-201ENST00000355572 NECTIN1Q15223 517 aa19.51■□□□□ 0.71
PDLIM7-201ENST00000355572 FSCN1Q16658 493 aaKnown RBP19.51■□□□□ 0.71
PDLIM7-201ENST00000355572 DUSP28Q4G0W2 176 aa19.51■□□□□ 0.71
PDLIM7-201ENST00000355572 FBXO11Q86XK2 927 aa19.51■□□□□ 0.71
PDLIM7-201ENST00000355572 PIGSQ96S52 555 aa19.51■□□□□ 0.71
PDLIM7-201ENST00000355572 LBHD1Q9BQE6 289 aaPredicted RBP19.51■□□□□ 0.71
PDLIM7-201ENST00000355572 WDR11Q9BZH6 1224 aa19.51■□□□□ 0.71
PDLIM7-201ENST00000355572 LY9Q9HBG7 655 aa19.51■□□□□ 0.71
PDLIM7-201ENST00000355572 ADD3Q9UEY8 706 aaKnown RBP19.51■□□□□ 0.71
PDLIM7-201ENST00000355572 TBX21Q9UL17 535 aa19.51■□□□□ 0.71
PDLIM7-201ENST00000355572 ELP1O95163 1332 aa19.51■□□□□ 0.71
PDLIM7-201ENST00000355572 GBF1Q92538 1859 aa19.5■□□□□ 0.71
PDLIM7-201ENST00000355572 TRDNQ13061 729 aa19.5■□□□□ 0.71
PDLIM7-201ENST00000355572 WTAPQ15007 396 aa19.5■□□□□ 0.71
PDLIM7-201ENST00000355572 BMP2KLQ5H9B9 411 aa19.5■□□□□ 0.71
PDLIM7-201ENST00000355572 RALYLQ86SE5 291 aaKnown RBP19.5■□□□□ 0.71
PDLIM7-201ENST00000355572 FAM126BQ8IXS8 530 aa19.5■□□□□ 0.71
PDLIM7-201ENST00000355572 SLC43A3Q8NBI5 491 aa19.5■□□□□ 0.71
PDLIM7-201ENST00000355572 PCSK9Q8NBP7 692 aaKnown RBP19.5■□□□□ 0.71
PDLIM7-201ENST00000355572 NUP133Q8WUM0 1156 aa19.5■□□□□ 0.71
PDLIM7-201ENST00000355572 GLT1D1Q96MS3 346 aa19.5■□□□□ 0.71
PDLIM7-201ENST00000355572 RIOX1Q9H6W3 641 aa19.5■□□□□ 0.71
PDLIM7-201ENST00000355572 PRKAG2Q9UGJ0 569 aa19.5■□□□□ 0.71
PDLIM7-201ENST00000355572 ARVCFO00192 962 aa19.49■□□□□ 0.71
PDLIM7-201ENST00000355572 TMEM67Q5HYA8 995 aa19.49■□□□□ 0.71
PDLIM7-201ENST00000355572 CREB3L3Q68CJ9 461 aa19.49■□□□□ 0.71
PDLIM7-201ENST00000355572 HOMER1Q86YM7 354 aa19.49■□□□□ 0.71
PDLIM7-201ENST00000355572 RAB11FIP4Q86YS3 637 aa19.49■□□□□ 0.71
PDLIM7-201ENST00000355572 RGS22Q8NE09 1264 aa19.49■□□□□ 0.71
PDLIM7-201ENST00000355572 TOX2Q96NM4 488 aa19.49■□□□□ 0.71
PDLIM7-201ENST00000355572 LRRC2Q9BYS8 371 aa19.49■□□□□ 0.71
PDLIM7-201ENST00000355572 UMODL1Q5DID0 1318 aa19.49■□□□□ 0.71
PDLIM7-201ENST00000355572 A0A0U1RQG5 324 aaPredicted RBP19.48■□□□□ 0.71
PDLIM7-201ENST00000355572 CD4P01730 458 aa19.48■□□□□ 0.71
PDLIM7-201ENST00000355572 RXRAP19793 462 aa19.48■□□□□ 0.71
PDLIM7-201ENST00000355572 PDE4DQ08499 809 aa19.48■□□□□ 0.71
PDLIM7-201ENST00000355572 DNERQ8NFT8 737 aa19.48■□□□□ 0.71
PDLIM7-201ENST00000355572 VTI1AQ96AJ9 217 aa19.48■□□□□ 0.71
PDLIM7-201ENST00000355572 ZFP91Q96JP5 570 aaPredicted RBP19.48■□□□□ 0.71
PDLIM7-201ENST00000355572 SPC25Q9HBM1 224 aa19.48■□□□□ 0.71
PDLIM7-201ENST00000355572 TMEM39AQ9NV64 488 aa19.48■□□□□ 0.71
PDLIM7-201ENST00000355572 LOC102724159A0A0B4J2E5 919 aa19.47■□□□□ 0.71
PDLIM7-201ENST00000355572 SH2B2O14492 632 aaPredicted RBP19.47■□□□□ 0.71
PDLIM7-201ENST00000355572 ZBTB5O15062 677 aa19.47■□□□□ 0.71
PDLIM7-201ENST00000355572 PRC1O43663 620 aa19.47■□□□□ 0.71
PDLIM7-201ENST00000355572 CFBP00751 764 aa19.47■□□□□ 0.71
PDLIM7-201ENST00000355572 HOXA13P31271 388 aaPredicted RBP19.47■□□□□ 0.71
PDLIM7-201ENST00000355572 HSD17B4P51659 736 aa19.47■□□□□ 0.71
PDLIM7-201ENST00000355572 PWP2Q15269 919 aaKnown RBP19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 101.8 ms