RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 ANO3Q9BYT9 981 aa19.47■□□□□ 0.71
VPS13B-201ENST00000355155 FHDC1Q9C0D6 1143 aaPredicted RBP19.47■□□□□ 0.71
VPS13B-201ENST00000355155 KCNMB3Q9NPA1 279 aa19.47■□□□□ 0.71
VPS13B-201ENST00000355155 GJA3Q9Y6H8 435 aa19.47■□□□□ 0.71
VPS13B-201ENST00000355155 ABCB11O95342 1321 aa19.47■□□□□ 0.71
VPS13B-201ENST00000355155 TBC1D10BQ4KMP7 808 aaPredicted RBP19.47■□□□□ 0.71
VPS13B-201ENST00000355155 FAM83BQ5T0W9 1011 aa19.47■□□□□ 0.71
VPS13B-201ENST00000355155 HSD3B7Q9H2F3 369 aa19.47■□□□□ 0.71
VPS13B-201ENST00000355155 FDX1P10109 184 aa19.47■□□□□ 0.71
VPS13B-201ENST00000355155 CALCRLQ16602 461 aa19.47■□□□□ 0.71
VPS13B-201ENST00000355155 UBE2SQ16763 222 aa19.47■□□□□ 0.71
VPS13B-201ENST00000355155 POTEDQ86YR6 584 aa19.47■□□□□ 0.71
VPS13B-201ENST00000355155 MMTAG2Q9BU76 263 aaKnown RBP19.47■□□□□ 0.71
VPS13B-201ENST00000355155 GTPBP4Q9BZE4 634 aaKnown RBP19.47■□□□□ 0.71
VPS13B-201ENST00000355155 ASTN2O75129 1339 aaPredicted RBP19.47■□□□□ 0.71
VPS13B-201ENST00000355155 KCNB1Q14721 858 aa19.46■□□□□ 0.71
VPS13B-201ENST00000355155 SCYL3Q8IZE3 742 aa19.46■□□□□ 0.71
VPS13B-201ENST00000355155 ENOX1Q8TC92 643 aaKnown RBP19.46■□□□□ 0.71
VPS13B-201ENST00000355155 SLC37A4O43826 429 aa19.46■□□□□ 0.71
VPS13B-201ENST00000355155 ZSCAN30Q86W11 494 aa19.46■□□□□ 0.71
VPS13B-201ENST00000355155 AOPEPQ8N6M6 819 aa19.46■□□□□ 0.71
VPS13B-201ENST00000355155 TRPM4Q8TD43 1214 aa19.46■□□□□ 0.71
VPS13B-201ENST00000355155 MAP3K20Q9NYL2 800 aaKnown RBP19.45■□□□□ 0.7
VPS13B-201ENST00000355155 ZC3H4Q9UPT8 1303 aaKnown RBP19.45■□□□□ 0.7
VPS13B-201ENST00000355155 USP14P54578 494 aa19.45■□□□□ 0.7
VPS13B-201ENST00000355155 COBLL1Q53SF7 1204 aa19.45■□□□□ 0.7
VPS13B-201ENST00000355155 HAS1Q92839 578 aa19.45■□□□□ 0.7
VPS13B-201ENST00000355155 P2RX7Q99572 595 aaKnown RBP19.45■□□□□ 0.7
VPS13B-201ENST00000355155 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.45■□□□□ 0.7
VPS13B-201ENST00000355155 STK17AQ9UEE5 414 aa19.45■□□□□ 0.7
VPS13B-201ENST00000355155 BECN2A8MW95 431 aa19.44■□□□□ 0.7
VPS13B-201ENST00000355155 TDP2O95551 362 aa19.44■□□□□ 0.7
VPS13B-201ENST00000355155 HIRAP54198 1017 aaPredicted RBP19.44■□□□□ 0.7
VPS13B-201ENST00000355155 MYL5Q02045 173 aa19.44■□□□□ 0.7
VPS13B-201ENST00000355155 ARHGAP27Q6ZUM4 889 aa19.44■□□□□ 0.7
VPS13B-201ENST00000355155 RAB34Q9BZG1 259 aa19.44■□□□□ 0.7
VPS13B-201ENST00000355155 STK24Q9Y6E0 443 aa19.44■□□□□ 0.7
VPS13B-201ENST00000355155 OTOFQ9HC10 1997 aa19.44■□□□□ 0.7
VPS13B-201ENST00000355155 ESPNB1AK53 854 aa19.44■□□□□ 0.7
VPS13B-201ENST00000355155 TMEM119Q4V9L6 283 aa19.44■□□□□ 0.7
VPS13B-201ENST00000355155 NBPF12Q5TAG4 269 aaPredicted RBP19.44■□□□□ 0.7
VPS13B-201ENST00000355155 CABP7Q86V35 215 aa19.44■□□□□ 0.7
VPS13B-201ENST00000355155 KCTD17Q8N5Z5 321 aa19.44■□□□□ 0.7
VPS13B-201ENST00000355155 PDILTQ8N807 584 aa19.44■□□□□ 0.7
VPS13B-201ENST00000355155 RMND1Q9NWS8 449 aa19.44■□□□□ 0.7
VPS13B-201ENST00000355155 DDX25Q9UHL0 483 aaKnown RBP19.44■□□□□ 0.7
VPS13B-201ENST00000355155 MRPL11Q9Y3B7 192 aaKnown RBP19.44■□□□□ 0.7
VPS13B-201ENST00000355155 A0A0G2JMZ2 1700 aa19.44■□□□□ 0.7
VPS13B-201ENST00000355155 UBA7P41226 1012 aa19.43■□□□□ 0.7
VPS13B-201ENST00000355155 TPM4P67936 248 aa19.43■□□□□ 0.7
VPS13B-201ENST00000355155 TMEM266Q2M3C6 531 aa19.43■□□□□ 0.7
VPS13B-201ENST00000355155 C7orf25Q9BPX7 421 aa19.43■□□□□ 0.7
VPS13B-201ENST00000355155 GLIS2Q9BZE0 524 aaPredicted RBP19.43■□□□□ 0.7
VPS13B-201ENST00000355155 ZKSCAN5Q9Y2L8 839 aa19.43■□□□□ 0.7
VPS13B-201ENST00000355155 FRMPD4Q14CM0 1322 aa19.43■□□□□ 0.7
VPS13B-201ENST00000355155 CUL4BQ13620 913 aa19.43■□□□□ 0.7
VPS13B-201ENST00000355155 ANGEL2Q5VTE6 544 aaKnown RBP19.43■□□□□ 0.7
VPS13B-201ENST00000355155 RRAGBQ5VZM2 374 aa19.43■□□□□ 0.7
VPS13B-201ENST00000355155 L3MBTL3Q96JM7 780 aaPredicted RBP19.43■□□□□ 0.7
VPS13B-201ENST00000355155 AS3MTQ9HBK9 375 aa19.43■□□□□ 0.7
VPS13B-201ENST00000355155 ADARB2Q9NS39 739 aaKnown RBP19.43■□□□□ 0.7
VPS13B-201ENST00000355155 ZNF536O15090 1300 aa19.43■□□□□ 0.7
VPS13B-201ENST00000355155 A0A087WWV3 80 aa19.43■□□□□ 0.7
VPS13B-201ENST00000355155 ICAM1P05362 532 aa19.43■□□□□ 0.7
VPS13B-201ENST00000355155 SYT17Q9BSW7 474 aa19.43■□□□□ 0.7
VPS13B-201ENST00000355155 RABGAP1Q9Y3P9 1069 aa19.43■□□□□ 0.7
VPS13B-201ENST00000355155 SCN4AP35499 1836 aa19.42■□□□□ 0.7
VPS13B-201ENST00000355155 USP17L15C9J2P7 530 aa19.42■□□□□ 0.7
VPS13B-201ENST00000355155 USP17L13C9JLJ4 530 aa19.42■□□□□ 0.7
VPS13B-201ENST00000355155 USP17L11C9JVI0 530 aa19.42■□□□□ 0.7
VPS13B-201ENST00000355155 USP17L18D6R9N7 530 aa19.42■□□□□ 0.7
VPS13B-201ENST00000355155 USP17L22D6RA61 530 aa19.42■□□□□ 0.7
VPS13B-201ENST00000355155 USP17L17D6RBQ6 530 aa19.42■□□□□ 0.7
VPS13B-201ENST00000355155 USP17L19D6RCP7 530 aa19.42■□□□□ 0.7
VPS13B-201ENST00000355155 USP17L20D6RJB6 530 aa19.42■□□□□ 0.7
VPS13B-201ENST00000355155 BIN1O00499 593 aa19.42■□□□□ 0.7
VPS13B-201ENST00000355155 STAT6P42226 847 aa19.42■□□□□ 0.7
VPS13B-201ENST00000355155 USP17L24Q0WX57 530 aa19.42■□□□□ 0.7
VPS13B-201ENST00000355155 USP17L6PQ6QN14 398 aa19.42■□□□□ 0.7
VPS13B-201ENST00000355155 SLFN12Q8IYM2 578 aa19.42■□□□□ 0.7
VPS13B-201ENST00000355155 GRAMD1CQ8IYS0 662 aa19.42■□□□□ 0.7
VPS13B-201ENST00000355155 ETNPPLQ8TBG4 499 aa19.42■□□□□ 0.7
VPS13B-201ENST00000355155 LENG9Q96B70 501 aa19.42■□□□□ 0.7
VPS13B-201ENST00000355155 ZNF18P17022 549 aa19.42■□□□□ 0.7
VPS13B-201ENST00000355155 HSD17B4P51659 736 aa19.42■□□□□ 0.7
VPS13B-201ENST00000355155 ARHGAP4P98171 946 aa19.42■□□□□ 0.7
VPS13B-201ENST00000355155 KARSQ15046 597 aaKnown RBP19.42■□□□□ 0.7
VPS13B-201ENST00000355155 SPICE1Q8N0Z3 855 aa19.42■□□□□ 0.7
VPS13B-201ENST00000355155 PRPF38AQ8NAV1 312 aaKnown RBP19.42■□□□□ 0.7
VPS13B-201ENST00000355155 LRRC15Q8TF66 581 aa19.42■□□□□ 0.7
VPS13B-201ENST00000355155 KLRG1Q96E93 195 aa19.42■□□□□ 0.7
VPS13B-201ENST00000355155 RPTORQ8N122 1335 aa19.41■□□□□ 0.7
VPS13B-201ENST00000355155 GOLGA6L6A8MZA4 724 aa19.41■□□□□ 0.7
VPS13B-201ENST00000355155 KLRC4O43908 158 aa19.41■□□□□ 0.7
VPS13B-201ENST00000355155 ADAMTS5Q9UNA0 930 aa19.41■□□□□ 0.7
VPS13B-201ENST00000355155 PTPRFP10586 1907 aa19.41■□□□□ 0.7
VPS13B-201ENST00000355155 GRB10Q13322 594 aa19.41■□□□□ 0.7
VPS13B-201ENST00000355155 FAM20AQ96MK3 541 aa19.41■□□□□ 0.7
VPS13B-201ENST00000355155 SLF1Q9BQI6 1058 aa19.41■□□□□ 0.7
VPS13B-201ENST00000355155 EMILIN3Q9NT22 766 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms