RNA–Protein interactions for RNA: ENST00000355119.8

LIMS2-202, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,045 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-202ENST00000355119 DUSP9Q99956 384 aaKnown RBP24.4■■□□□ 1.5
LIMS2-202ENST00000355119 JMJD4Q9H9V9 463 aa24.4■■□□□ 1.5
LIMS2-202ENST00000355119 ARGLU1Q9NWB6 273 aaPredicted RBP24.4■■□□□ 1.5
LIMS2-202ENST00000355119 LRWD1Q9UFC0 647 aa24.4■■□□□ 1.5
LIMS2-202ENST00000355119 PDE6BP35913 854 aa24.4■■□□□ 1.5
LIMS2-202ENST00000355119 HOXA7P31268 230 aaPredicted RBP24.39■■□□□ 1.5
LIMS2-202ENST00000355119 SCNN1DP51172 638 aa24.39■■□□□ 1.5
LIMS2-202ENST00000355119 GRB10Q13322 594 aa24.39■■□□□ 1.5
LIMS2-202ENST00000355119 TUBB2AQ13885 445 aa24.39■■□□□ 1.5
LIMS2-202ENST00000355119 PDIA5Q14554 519 aa24.39■■□□□ 1.5
LIMS2-202ENST00000355119 ADGRF4Q8IZF3 695 aa24.39■■□□□ 1.5
LIMS2-202ENST00000355119 CCDC17Q96LX7 622 aa24.39■■□□□ 1.5
LIMS2-202ENST00000355119 TUBB2BQ9BVA1 445 aa24.39■■□□□ 1.5
LIMS2-202ENST00000355119 EHD4Q9H223 541 aa24.39■■□□□ 1.5
LIMS2-202ENST00000355119 BRWD3Q6RI45 1802 aa24.39■■□□□ 1.49
LIMS2-202ENST00000355119 RNF225M0QZC1 329 aaPredicted RBP24.39■■□□□ 1.49
LIMS2-202ENST00000355119 CLEC10AQ8IUN9 316 aa24.39■■□□□ 1.49
LIMS2-202ENST00000355119 OR8K1Q8NGG5 319 aa24.39■■□□□ 1.49
LIMS2-202ENST00000355119 MXD3Q9BW11 206 aa24.39■■□□□ 1.49
LIMS2-202ENST00000355119 GREB1LQ9C091 1923 aaPredicted RBP24.38■■□□□ 1.49
LIMS2-202ENST00000355119 APOBEC3HQ6NTF7 200 aaKnown RBP24.38■■□□□ 1.49
LIMS2-202ENST00000355119 CDK5RAP3Q96JB5 506 aa24.38■■□□□ 1.49
LIMS2-202ENST00000355119 FAM53CQ9NYF3 392 aa24.38■■□□□ 1.49
LIMS2-202ENST00000355119 CAPN11Q9UMQ6 739 aa24.38■■□□□ 1.49
LIMS2-202ENST00000355119 CCDC96Q2M329 555 aa24.37■■□□□ 1.49
LIMS2-202ENST00000355119 CUL5Q93034 780 aa24.37■■□□□ 1.49
LIMS2-202ENST00000355119 PNMA5Q96PV4 448 aa24.37■■□□□ 1.49
LIMS2-202ENST00000355119 LUC7L2Q9Y383 392 aaKnown RBP24.37■■□□□ 1.49
LIMS2-202ENST00000355119 PVALEFA0A1B0GWK0 134 aa24.37■■□□□ 1.49
LIMS2-202ENST00000355119 PES1O00541 588 aaKnown RBP24.37■■□□□ 1.49
LIMS2-202ENST00000355119 SLC37A4O43826 429 aa24.37■■□□□ 1.49
LIMS2-202ENST00000355119 TDP2O95551 362 aa24.37■■□□□ 1.49
LIMS2-202ENST00000355119 CLCN6P51797 869 aa24.37■■□□□ 1.49
LIMS2-202ENST00000355119 MRPL12P52815 198 aaKnown RBP24.37■■□□□ 1.49
LIMS2-202ENST00000355119 STK4Q13043 487 aa24.37■■□□□ 1.49
LIMS2-202ENST00000355119 ANKRD40Q6AI12 368 aa24.37■■□□□ 1.49
LIMS2-202ENST00000355119 PPP4R3AQ6IN85 833 aa24.37■■□□□ 1.49
LIMS2-202ENST00000355119 ACRBPQ8NEB7 543 aa24.37■■□□□ 1.49
LIMS2-202ENST00000355119 MASTLQ96GX5 879 aa24.37■■□□□ 1.49
LIMS2-202ENST00000355119 TUBGCP2Q9BSJ2 902 aa24.37■■□□□ 1.49
LIMS2-202ENST00000355119 NUP58Q9BVL2 599 aa24.37■■□□□ 1.49
LIMS2-202ENST00000355119 LRRC27Q9C0I9 530 aa24.37■■□□□ 1.49
LIMS2-202ENST00000355119 TTC26A0AVF1 554 aa24.36■■□□□ 1.49
LIMS2-202ENST00000355119 MPHOSPH10O00566 681 aaKnown RBP24.36■■□□□ 1.49
LIMS2-202ENST00000355119 EDIL3O43854 480 aa24.36■■□□□ 1.49
LIMS2-202ENST00000355119 TNNI2P48788 182 aa24.36■■□□□ 1.49
LIMS2-202ENST00000355119 CLK2P49760 499 aaKnown RBP24.36■■□□□ 1.49
LIMS2-202ENST00000355119 TSR1Q2NL82 804 aaKnown RBP24.36■■□□□ 1.49
LIMS2-202ENST00000355119 KRT222Q8N1A0 295 aa24.36■■□□□ 1.49
LIMS2-202ENST00000355119 MTMR8Q96EF0 704 aa24.36■■□□□ 1.49
LIMS2-202ENST00000355119 DNAJC7Q99615 494 aa24.36■■□□□ 1.49
LIMS2-202ENST00000355119 IRX2Q9BZI1 471 aaPredicted RBP24.36■■□□□ 1.49
LIMS2-202ENST00000355119 BLOC1S4Q9NUP1 217 aa24.36■■□□□ 1.49
LIMS2-202ENST00000355119 ZNF446Q9NWS9 450 aa24.36■■□□□ 1.49
LIMS2-202ENST00000355119 MYO1AQ9UBC5 1043 aa24.36■■□□□ 1.49
LIMS2-202ENST00000355119 PRKCSHP14314 528 aaPredicted RBP24.35■■□□□ 1.49
LIMS2-202ENST00000355119 CRKP46108 304 aa24.35■■□□□ 1.49
LIMS2-202ENST00000355119 BMS1Q14692 1282 aaKnown RBP24.35■■□□□ 1.49
LIMS2-202ENST00000355119 ZNF569Q5MCW4 686 aa24.35■■□□□ 1.49
LIMS2-202ENST00000355119 UNC13DQ70J99 1090 aa24.35■■□□□ 1.49
LIMS2-202ENST00000355119 RSRC2Q7L4I2 434 aaKnown RBP24.35■■□□□ 1.49
LIMS2-202ENST00000355119 COL23A1Q86Y22 540 aaPredicted RBP24.35■■□□□ 1.49
LIMS2-202ENST00000355119 RETREG2Q8NC44 543 aa24.35■■□□□ 1.49
LIMS2-202ENST00000355119 NAP1L4Q99733 375 aaKnown RBP24.35■■□□□ 1.49
LIMS2-202ENST00000355119 ADAMTSL1Q8N6G6 1762 aa24.35■■□□□ 1.49
LIMS2-202ENST00000355119 ZBTB5O15062 677 aa24.35■■□□□ 1.49
LIMS2-202ENST00000355119 PPP1R11O60927 126 aaPredicted RBP24.35■■□□□ 1.49
LIMS2-202ENST00000355119 KRT79Q5XKE5 535 aa24.35■■□□□ 1.49
LIMS2-202ENST00000355119 TTBK2Q6IQ55 1244 aa24.35■■□□□ 1.49
LIMS2-202ENST00000355119 PODNQ7Z5L7 613 aa24.35■■□□□ 1.49
LIMS2-202ENST00000355119 GPR161Q8N6U8 529 aaKnown RBP24.35■■□□□ 1.49
LIMS2-202ENST00000355119 LARP4BQ92615 738 aaKnown RBP24.35■■□□□ 1.49
LIMS2-202ENST00000355119 GOLGA1Q92805 767 aa24.35■■□□□ 1.49
LIMS2-202ENST00000355119 CNOT6LQ96LI5 555 aaKnown RBP24.35■■□□□ 1.49
LIMS2-202ENST00000355119 ZDHHC15Q96MV8 337 aa24.35■■□□□ 1.49
LIMS2-202ENST00000355119 MRIQ9BWK5 157 aa24.35■■□□□ 1.49
LIMS2-202ENST00000355119 A0A0U1RQJ8 604 aa24.34■■□□□ 1.49
LIMS2-202ENST00000355119 B4DLN1 442 aa24.34■■□□□ 1.49
LIMS2-202ENST00000355119 FCER1AP12319 257 aa24.34■■□□□ 1.49
LIMS2-202ENST00000355119 GCFC2P16383 781 aaKnown RBP24.34■■□□□ 1.49
LIMS2-202ENST00000355119 ATRIPQ8WXE1 791 aa24.34■■□□□ 1.49
LIMS2-202ENST00000355119 RAD54LQ92698 747 aa24.34■■□□□ 1.49
LIMS2-202ENST00000355119 GLT8D2Q9H1C3 349 aa24.34■■□□□ 1.49
LIMS2-202ENST00000355119 EPN1Q9Y6I3 576 aaPredicted RBP24.34■■□□□ 1.49
LIMS2-202ENST00000355119 MTIF2P46199 727 aaKnown RBP24.34■■□□□ 1.49
LIMS2-202ENST00000355119 ATP2B2Q01814 1243 aa24.34■■□□□ 1.49
LIMS2-202ENST00000355119 MCM6Q14566 821 aa24.34■■□□□ 1.49
LIMS2-202ENST00000355119 FLAD1Q8NFF5 587 aa24.34■■□□□ 1.49
LIMS2-202ENST00000355119 RABGGTAQ92696 567 aa24.34■■□□□ 1.49
LIMS2-202ENST00000355119 AKT1S1Q96B36 256 aa24.34■■□□□ 1.49
LIMS2-202ENST00000355119 CDC23Q9UJX2 597 aa24.34■■□□□ 1.49
LIMS2-202ENST00000355119 COL11A2P13942 1736 aaPredicted RBP24.33■■□□□ 1.49
LIMS2-202ENST00000355119 CTAGE9A4FU28 777 aa24.33■■□□□ 1.49
LIMS2-202ENST00000355119 MYMKA6NI61 221 aa24.33■■□□□ 1.49
LIMS2-202ENST00000355119 ARHGAP25P42331 645 aa24.33■■□□□ 1.49
LIMS2-202ENST00000355119 FKBP1AP62942 108 aaKnown RBP24.33■■□□□ 1.49
LIMS2-202ENST00000355119 UBE2SQ16763 222 aa24.33■■□□□ 1.49
LIMS2-202ENST00000355119 TMEM119Q4V9L6 283 aa24.33■■□□□ 1.49
LIMS2-202ENST00000355119 CENPPQ6IPU0 288 aa24.33■■□□□ 1.49
LIMS2-202ENST00000355119 TMCO3Q6UWJ1 677 aa24.33■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms