RNA–Protein interactions for RNA: ENST00000355086.7

SRGAP1-201, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP1, Length 23,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-201ENST00000355086 CDC37L1Q7L3B6 337 aa6.29□□□□□ -1.4
SRGAP1-201ENST00000355086 TTC30AQ86WT1 665 aa6.29□□□□□ -1.4
SRGAP1-201ENST00000355086 N4BP2L2Q92802 583 aaPredicted RBP6.29□□□□□ -1.4
SRGAP1-201ENST00000355086 TEKT3Q9BXF9 490 aa6.29□□□□□ -1.4
SRGAP1-201ENST00000355086 NEUROG2Q9H2A3 272 aa6.29□□□□□ -1.4
SRGAP1-201ENST00000355086 ZNF532Q9HCE3 1301 aa6.29□□□□□ -1.4
SRGAP1-201ENST00000355086 ZBTB41Q5SVQ8 909 aa6.29□□□□□ -1.4
SRGAP1-201ENST00000355086 CAPS2Q9BXY5 557 aa6.29□□□□□ -1.4
SRGAP1-201ENST00000355086 IFNA8P32881 189 aa6.29□□□□□ -1.4
SRGAP1-201ENST00000355086 EPHB1P54762 984 aa6.29□□□□□ -1.4
SRGAP1-201ENST00000355086 MROH5Q6ZUA9 1318 aa6.29□□□□□ -1.4
SRGAP1-201ENST00000355086 ACTN1P12814 892 aa6.29□□□□□ -1.4
SRGAP1-201ENST00000355086 TTC25Q96NG3 672 aa6.29□□□□□ -1.4
SRGAP1-201ENST00000355086 THRAP3Q9Y2W1 955 aaKnown RBP6.29□□□□□ -1.4
SRGAP1-201ENST00000355086 TNRQ92752 1358 aa6.29□□□□□ -1.4
SRGAP1-201ENST00000355086 MYL7Q01449 175 aa6.29□□□□□ -1.4
SRGAP1-201ENST00000355086 SEPT9Q9UHD8 586 aaPredicted RBP6.29□□□□□ -1.4
SRGAP1-201ENST00000355086 BPIFB4P59827 614 aa6.29□□□□□ -1.4
SRGAP1-201ENST00000355086 CCNYQ8ND76 341 aa6.29□□□□□ -1.4
SRGAP1-201ENST00000355086 CDC26Q8NHZ8 85 aa6.29□□□□□ -1.4
SRGAP1-201ENST00000355086 METTL22Q9BUU2 404 aaPredicted RBP6.29□□□□□ -1.4
SRGAP1-201ENST00000355086 FRMD3A2A2Y4 597 aa6.29□□□□□ -1.4
SRGAP1-201ENST00000355086 ELF1P32519 619 aa6.29□□□□□ -1.4
SRGAP1-201ENST00000355086 GDAP1Q8TB36 358 aa6.29□□□□□ -1.4
SRGAP1-201ENST00000355086 ZNF653Q96CK0 615 aa6.29□□□□□ -1.4
SRGAP1-201ENST00000355086 C1orf228Q6PIY5 440 aa6.29□□□□□ -1.4
SRGAP1-201ENST00000355086 FAM227BQ96M60 508 aa6.29□□□□□ -1.4
SRGAP1-201ENST00000355086 TLK1Q9UKI8 766 aa6.29□□□□□ -1.4
SRGAP1-201ENST00000355086 EFCAB13Q8IY85 973 aa6.29□□□□□ -1.4
SRGAP1-201ENST00000355086 SOX5P35711 763 aa6.29□□□□□ -1.4
SRGAP1-201ENST00000355086 CCDC24Q8N4L8 307 aa6.29□□□□□ -1.4
SRGAP1-201ENST00000355086 ARAP1Q96P48 1450 aa6.29□□□□□ -1.4
SRGAP1-201ENST00000355086 FAM95CA0A1B0GW59 222 aa6.29□□□□□ -1.4
SRGAP1-201ENST00000355086 MYO1FO00160 1098 aa6.29□□□□□ -1.4
SRGAP1-201ENST00000355086 RPSAP08865 295 aaKnown RBP6.29□□□□□ -1.4
SRGAP1-201ENST00000355086 GTF2IP78347 998 aa6.29□□□□□ -1.4
SRGAP1-201ENST00000355086 NAA35Q5VZE5 725 aa6.29□□□□□ -1.4
SRGAP1-201ENST00000355086 KRT80Q6KB66 452 aa6.29□□□□□ -1.4
SRGAP1-201ENST00000355086 MAGOHBQ96A72 148 aaKnown RBP6.29□□□□□ -1.4
SRGAP1-201ENST00000355086 ALKBH8Q96BT7 664 aaKnown RBP6.29□□□□□ -1.4
SRGAP1-201ENST00000355086 SCINQ9Y6U3 715 aa6.29□□□□□ -1.4
SRGAP1-201ENST00000355086 TTI1O43156 1089 aa6.28□□□□□ -1.4
SRGAP1-201ENST00000355086 FBXO11Q86XK2 927 aa6.28□□□□□ -1.4
SRGAP1-201ENST00000355086 TRIM37O94972 964 aa6.28□□□□□ -1.4
SRGAP1-201ENST00000355086 NFKBIAP25963 317 aa6.28□□□□□ -1.4
SRGAP1-201ENST00000355086 TTLL7Q6ZT98 887 aa6.28□□□□□ -1.4
SRGAP1-201ENST00000355086 INTS9Q9NV88 658 aaKnown RBP6.28□□□□□ -1.4
SRGAP1-201ENST00000355086 KPNA2P52292 529 aaKnown RBP6.28□□□□□ -1.4
SRGAP1-201ENST00000355086 CERKLQ49MI3 558 aaPredicted RBP6.28□□□□□ -1.4
SRGAP1-201ENST00000355086 ZNF790Q6PG37 636 aa6.28□□□□□ -1.4
SRGAP1-201ENST00000355086 SULF1Q8IWU6 871 aa6.28□□□□□ -1.4
SRGAP1-201ENST00000355086 EXOC8Q8IYI6 725 aa6.28□□□□□ -1.4
SRGAP1-201ENST00000355086 DCPSQ96C86 337 aaKnown RBP6.28□□□□□ -1.4
SRGAP1-201ENST00000355086 ARPP21Q9UBL0 812 aaPredicted RBP6.28□□□□□ -1.4
SRGAP1-201ENST00000355086 POLA2Q14181 598 aa6.28□□□□□ -1.4
SRGAP1-201ENST00000355086 RETREG2Q8NC44 543 aa6.28□□□□□ -1.4
SRGAP1-201ENST00000355086 SNX19Q92543 992 aa6.28□□□□□ -1.4
SRGAP1-201ENST00000355086 DBNDD2Q9BQY9 259 aa6.28□□□□□ -1.4
SRGAP1-201ENST00000355086 TEX12Q9BXU0 123 aa6.28□□□□□ -1.4
SRGAP1-201ENST00000355086 METTL14Q9HCE5 456 aaKnown RBP6.28□□□□□ -1.4
SRGAP1-201ENST00000355086 IFT140Q96RY7 1462 aa6.28□□□□□ -1.4
SRGAP1-201ENST00000355086 WDR64B1ANS9 1081 aa6.28□□□□□ -1.4
SRGAP1-201ENST00000355086 GLE1Q53GS7 698 aaKnown RBP6.28□□□□□ -1.4
SRGAP1-201ENST00000355086 ATG16L1Q676U5 607 aa6.28□□□□□ -1.4
SRGAP1-201ENST00000355086 RMDN2Q96LZ7 410 aa6.28□□□□□ -1.4
SRGAP1-201ENST00000355086 KIF14Q15058 1648 aa6.28□□□□□ -1.4
SRGAP1-201ENST00000355086 TCP1P17987 556 aaKnown RBP6.28□□□□□ -1.4
SRGAP1-201ENST00000355086 SERTAD1Q9UHV2 236 aa6.28□□□□□ -1.4
SRGAP1-201ENST00000355086 PTK2Q05397 1052 aa6.28□□□□□ -1.4
SRGAP1-201ENST00000355086 TFDP1Q14186 410 aa6.28□□□□□ -1.4
SRGAP1-201ENST00000355086 NUDCD1Q96RS6 583 aa6.28□□□□□ -1.4
SRGAP1-201ENST00000355086 FLT4P35916 1363 aa6.28□□□□□ -1.4
SRGAP1-201ENST00000355086 KLC3Q6P597 504 aa6.28□□□□□ -1.4
SRGAP1-201ENST00000355086 RBM46Q8TBY0 533 aaKnown RBP6.28□□□□□ -1.4
SRGAP1-201ENST00000355086 MTRQ99707 1265 aa6.28□□□□□ -1.4
SRGAP1-201ENST00000355086 TCP10L2B9ZVM9 353 aa6.28□□□□□ -1.4
SRGAP1-201ENST00000355086 CHEK2O96017 543 aa6.28□□□□□ -1.4
SRGAP1-201ENST00000355086 KIF19Q2TAC6 998 aa6.28□□□□□ -1.4
SRGAP1-201ENST00000355086 C17orf53Q8N3J3 647 aaPredicted RBP6.28□□□□□ -1.4
SRGAP1-201ENST00000355086 RNF139Q8WU17 664 aa6.28□□□□□ -1.4
SRGAP1-201ENST00000355086 GTPBP10A4D1E9 387 aaKnown RBP6.28□□□□□ -1.4
SRGAP1-201ENST00000355086 GABPB1Q06547 395 aaPredicted RBP6.28□□□□□ -1.4
SRGAP1-201ENST00000355086 MESDQ14696 234 aa6.28□□□□□ -1.4
SRGAP1-201ENST00000355086 ELMSAN1Q6PJG2 1045 aa6.28□□□□□ -1.4
SRGAP1-201ENST00000355086 MMTAG2Q9BU76 263 aaKnown RBP6.28□□□□□ -1.4
SRGAP1-201ENST00000355086 ATP8B3O60423 1300 aa6.28□□□□□ -1.4
SRGAP1-201ENST00000355086 PPARGP37231 505 aaPredicted RBP6.28□□□□□ -1.4
SRGAP1-201ENST00000355086 BCAS4Q8TDM0 211 aa6.28□□□□□ -1.4
SRGAP1-201ENST00000355086 JAK2O60674 1132 aa6.28□□□□□ -1.4
SRGAP1-201ENST00000355086 OR52Z1P0C646 297 aa6.28□□□□□ -1.4
SRGAP1-201ENST00000355086 MAPK4P31152 587 aa6.28□□□□□ -1.4
SRGAP1-201ENST00000355086 MFSD14BQ5SR56 506 aa6.28□□□□□ -1.4
SRGAP1-201ENST00000355086 CDCA7Q9BWT1 371 aaPredicted RBP6.28□□□□□ -1.4
SRGAP1-201ENST00000355086 NUDCD3Q8IVD9 361 aa6.28□□□□□ -1.4
SRGAP1-201ENST00000355086 FBXO41Q8TF61 875 aa6.28□□□□□ -1.4
SRGAP1-201ENST00000355086 ZSCAN20P17040 1043 aaPredicted RBP6.28□□□□□ -1.4
SRGAP1-201ENST00000355086 TMEM259Q4ZIN3 620 aa6.28□□□□□ -1.4
SRGAP1-201ENST00000355086 ZC3H12BQ5HYM0 836 aaKnown RBP6.28□□□□□ -1.4
SRGAP1-201ENST00000355086 KRT40Q6A162 431 aa6.28□□□□□ -1.4
SRGAP1-201ENST00000355086 CACTINQ8WUQ7 758 aaKnown RBP6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms