RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 HDAC6Q9UBN7 1215 aa10.43□□□□□ -0.74
SMG6-202ENST00000354901 MCM8Q9UJA3 840 aa10.43□□□□□ -0.74
SMG6-202ENST00000354901 ANAPC4Q9UJX5 808 aa10.43□□□□□ -0.74
SMG6-202ENST00000354901 GUCA1BQ9UMX6 200 aa10.43□□□□□ -0.74
SMG6-202ENST00000354901 ZNF804BA4D1E1 1349 aa10.43□□□□□ -0.74
SMG6-202ENST00000354901 MYH14Q7Z406 1995 aaKnown RBP10.43□□□□□ -0.74
SMG6-202ENST00000354901 RNF225M0QZC1 329 aaPredicted RBP10.43□□□□□ -0.74
SMG6-202ENST00000354901 BACH1O14867 736 aa10.43□□□□□ -0.74
SMG6-202ENST00000354901 USP5P45974 858 aa10.43□□□□□ -0.74
SMG6-202ENST00000354901 RPS8P62241 208 aaKnown RBP10.43□□□□□ -0.74
SMG6-202ENST00000354901 KRT31Q15323 416 aa10.43□□□□□ -0.74
SMG6-202ENST00000354901 CLEC4GQ6UXB4 293 aa10.43□□□□□ -0.74
SMG6-202ENST00000354901 SND1Q7KZF4 910 aaKnown RBP eCLIP10.43□□□□□ -0.74
SMG6-202ENST00000354901 NBPF5PQ86XG9 351 aaPredicted RBP10.43□□□□□ -0.74
SMG6-202ENST00000354901 MICAL1Q8TDZ2 1067 aa10.43□□□□□ -0.74
SMG6-202ENST00000354901 GSDMAQ96QA5 445 aa10.43□□□□□ -0.74
SMG6-202ENST00000354901 BRIP1Q9BX63 1249 aa10.43□□□□□ -0.74
SMG6-202ENST00000354901 KLC4Q9NSK0 619 aa10.43□□□□□ -0.74
SMG6-202ENST00000354901 ADGRG1Q9Y653 693 aa10.43□□□□□ -0.74
SMG6-202ENST00000354901 LRP5O75197 1615 aa10.43□□□□□ -0.74
SMG6-202ENST00000354901 FAM205AQ6ZU69 1335 aa10.43□□□□□ -0.74
SMG6-202ENST00000354901 USP17L3A6NCW0 530 aa10.43□□□□□ -0.74
SMG6-202ENST00000354901 USP17L4A6NCW7 530 aa10.43□□□□□ -0.74
SMG6-202ENST00000354901 GYPCP04921 128 aa10.43□□□□□ -0.74
SMG6-202ENST00000354901 ATP2C1P98194 919 aaPredicted RBP10.43□□□□□ -0.74
SMG6-202ENST00000354901 DIXDC1Q155Q3 683 aa10.43□□□□□ -0.74
SMG6-202ENST00000354901 FAM98CQ17RN3 349 aaKnown RBP10.43□□□□□ -0.74
SMG6-202ENST00000354901 USP17L1Q7RTZ2 530 aa10.43□□□□□ -0.74
SMG6-202ENST00000354901 LINC00116Q8NCU8 138 aa10.43□□□□□ -0.74
SMG6-202ENST00000354901 NELFBQ8WX92 580 aa10.43□□□□□ -0.74
SMG6-202ENST00000354901 SLF1Q9BQI6 1058 aa10.43□□□□□ -0.74
SMG6-202ENST00000354901 SAP30BPQ9UHR5 308 aaKnown RBP10.43□□□□□ -0.74
SMG6-202ENST00000354901 MFAP3LO75121 409 aa10.42□□□□□ -0.74
SMG6-202ENST00000354901 UPP2O95045 317 aa10.42□□□□□ -0.74
SMG6-202ENST00000354901 CALM1P0DP23 149 aa10.42□□□□□ -0.74
SMG6-202ENST00000354901 CALM2P0DP24 149 aa10.42□□□□□ -0.74
SMG6-202ENST00000354901 CALM3P0DP25 149 aa10.42□□□□□ -0.74
SMG6-202ENST00000354901 STAT6P42226 847 aa10.42□□□□□ -0.74
SMG6-202ENST00000354901 SF3B2Q13435 895 aaKnown RBP10.42□□□□□ -0.74
SMG6-202ENST00000354901 CCDC181Q5TID7 509 aa10.42□□□□□ -0.74
SMG6-202ENST00000354901 HEATR3Q7Z4Q2 680 aa10.42□□□□□ -0.74
SMG6-202ENST00000354901 SPATS2LQ9NUQ6 558 aaKnown RBP10.42□□□□□ -0.74
SMG6-202ENST00000354901 HPCAL4Q9UM19 191 aa10.42□□□□□ -0.74
SMG6-202ENST00000354901 TFR2Q9UP52 801 aa10.42□□□□□ -0.74
SMG6-202ENST00000354901 SCN7AQ01118 1682 aa10.42□□□□□ -0.74
SMG6-202ENST00000354901 MYH13Q9UKX3 1938 aa10.42□□□□□ -0.74
SMG6-202ENST00000354901 ONECUT3O60422 494 aaPredicted RBP10.42□□□□□ -0.74
SMG6-202ENST00000354901 PPP2R5BQ15173 497 aa10.42□□□□□ -0.74
SMG6-202ENST00000354901 INF2Q27J81 1249 aa10.42□□□□□ -0.74
SMG6-202ENST00000354901 CCDC40Q4G0X9 1142 aa10.42□□□□□ -0.74
SMG6-202ENST00000354901 SH3RF1Q7Z6J0 888 aa10.42□□□□□ -0.74
SMG6-202ENST00000354901 ELOA2Q8IYF1 753 aaPredicted RBP10.42□□□□□ -0.74
SMG6-202ENST00000354901 YIPF3Q9GZM5 350 aa10.42□□□□□ -0.74
SMG6-202ENST00000354901 MKNK2Q9HBH9 465 aa10.42□□□□□ -0.74
SMG6-202ENST00000354901 NID2Q14112 1375 aa10.42□□□□□ -0.74
SMG6-202ENST00000354901 BTAF1O14981 1849 aa10.42□□□□□ -0.74
SMG6-202ENST00000354901 CCDC194A0A1B0GVG4 234 aa10.42□□□□□ -0.74
SMG6-202ENST00000354901 LY75O60449 1722 aa10.42□□□□□ -0.74
SMG6-202ENST00000354901 KRT9P35527 623 aa10.42□□□□□ -0.74
SMG6-202ENST00000354901 RCAN1P53805 252 aa10.42□□□□□ -0.74
SMG6-202ENST00000354901 UBXN1Q04323 297 aa10.42□□□□□ -0.74
SMG6-202ENST00000354901 TBC1D8BQ0IIM8 1120 aa10.42□□□□□ -0.74
SMG6-202ENST00000354901 PAK1Q13153 545 aa10.42□□□□□ -0.74
SMG6-202ENST00000354901 TYW1BQ6NUM6 668 aa10.42□□□□□ -0.74
SMG6-202ENST00000354901 TNFRSF25Q93038 417 aa10.42□□□□□ -0.74
SMG6-202ENST00000354901 NLRP3Q96P20 1036 aa10.42□□□□□ -0.74
SMG6-202ENST00000354901 NAPGQ99747 312 aaPredicted RBP10.42□□□□□ -0.74
SMG6-202ENST00000354901 VAT1LQ9HCJ6 419 aa10.42□□□□□ -0.74
SMG6-202ENST00000354901 BAIAP2L1Q9UHR4 511 aa10.42□□□□□ -0.74
SMG6-202ENST00000354901 GOLGA6L7A0A1B0GV03 622 aa10.41□□□□□ -0.74
SMG6-202ENST00000354901 DDAH1O94760 285 aa10.41□□□□□ -0.74
SMG6-202ENST00000354901 PRCPP42785 496 aa10.41□□□□□ -0.74
SMG6-202ENST00000354901 MEX3CQ5U5Q3 659 aaKnown RBP10.41□□□□□ -0.74
SMG6-202ENST00000354901 CDKAL1Q5VV42 579 aa10.41□□□□□ -0.74
SMG6-202ENST00000354901 PNMA1Q8ND90 353 aa10.41□□□□□ -0.74
SMG6-202ENST00000354901 HNRNPLLQ8WVV9 542 aaKnown RBP10.41□□□□□ -0.74
SMG6-202ENST00000354901 MTA3Q9BTC8 594 aa10.41□□□□□ -0.74
SMG6-202ENST00000354901 ANKIB1Q9P2G1 1089 aa10.41□□□□□ -0.74
SMG6-202ENST00000354901 KCNJ18B7U540 433 aa10.41□□□□□ -0.74
SMG6-202ENST00000354901 BMP15O95972 392 aa10.41□□□□□ -0.74
SMG6-202ENST00000354901 RPN1P04843 607 aaKnown RBP10.41□□□□□ -0.74
SMG6-202ENST00000354901 ERCC3P19447 782 aa10.41□□□□□ -0.74
SMG6-202ENST00000354901 COPB1P53618 953 aaKnown RBP10.41□□□□□ -0.74
SMG6-202ENST00000354901 KCNJ12Q14500 433 aa10.41□□□□□ -0.74
SMG6-202ENST00000354901 BLIDQ8IZY5 108 aa10.41□□□□□ -0.74
SMG6-202ENST00000354901 PANX2Q96RD6 677 aa10.41□□□□□ -0.74
SMG6-202ENST00000354901 PSMB7Q99436 277 aa10.41□□□□□ -0.74
SMG6-202ENST00000354901 TRIM10Q9UDY6 481 aa10.41□□□□□ -0.74
SMG6-202ENST00000354901 SEC24CP53992 1094 aa10.41□□□□□ -0.74
SMG6-202ENST00000354901 RCSD1Q6JBY9 416 aa10.41□□□□□ -0.74
SMG6-202ENST00000354901 CTAGE1Q96RT6 745 aa10.41□□□□□ -0.74
SMG6-202ENST00000354901 SETDB2Q96T68 719 aa10.41□□□□□ -0.74
SMG6-202ENST00000354901 CHP1Q99653 195 aa10.41□□□□□ -0.74
SMG6-202ENST00000354901 TMEM60Q9H2L4 133 aa10.41□□□□□ -0.74
SMG6-202ENST00000354901 TRPC5Q9UL62 973 aaPredicted RBP10.41□□□□□ -0.74
SMG6-202ENST00000354901 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.41□□□□□ -0.74
SMG6-202ENST00000354901 MYH8P13535 1937 aa10.4□□□□□ -0.74
SMG6-202ENST00000354901 ARAP2Q8WZ64 1704 aa10.4□□□□□ -0.74
SMG6-202ENST00000354901 EIF3HO15372 352 aaKnown RBP eCLIP10.4□□□□□ -0.74
SMG6-202ENST00000354901 DNA2P51530 1060 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms