RNA–Protein interactions for RNA: ENST00000354757.4

PCDHB11-201, Transcript of protocadherin beta 11, humanhuman

APPRIS P1 BASIC

Gene PCDHB11, Length 4,198 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-201ENST00000354757 EVX2Q03828 476 aa13.72□□□□□ -0.21
PCDHB11-201ENST00000354757 MORC3Q14149 939 aa13.72□□□□□ -0.21
PCDHB11-201ENST00000354757 PTPROQ16827 1216 aa13.72□□□□□ -0.21
PCDHB11-201ENST00000354757 VGLL2Q8N8G2 317 aa13.72□□□□□ -0.21
PCDHB11-201ENST00000354757 PIGOQ8TEQ8 1089 aa13.72□□□□□ -0.21
PCDHB11-201ENST00000354757 ALS2CR12Q96Q35 445 aa13.72□□□□□ -0.21
PCDHB11-201ENST00000354757 FNBP1Q96RU3 617 aa13.72□□□□□ -0.21
PCDHB11-201ENST00000354757 SLF1Q9BQI6 1058 aa13.72□□□□□ -0.21
PCDHB11-201ENST00000354757 ACBD3Q9H3P7 528 aa13.72□□□□□ -0.21
PCDHB11-201ENST00000354757 GDAQ9Y2T3 454 aa13.72□□□□□ -0.21
PCDHB11-201ENST00000354757 PAXBP1Q9Y5B6 917 aa13.72□□□□□ -0.21
PCDHB11-201ENST00000354757 GPR75-ASB3A0A0A6YYF3 556 aa13.72□□□□□ -0.21
PCDHB11-201ENST00000354757 FOSP01100 380 aaPredicted RBP13.72□□□□□ -0.21
PCDHB11-201ENST00000354757 CNGA4Q8IV77 575 aa13.72□□□□□ -0.21
PCDHB11-201ENST00000354757 FAM178BQ8IXR5 827 aa13.72□□□□□ -0.21
PCDHB11-201ENST00000354757 MYOCDQ8IZQ8 938 aa13.72□□□□□ -0.21
PCDHB11-201ENST00000354757 CCDC127Q96BQ5 260 aa13.72□□□□□ -0.21
PCDHB11-201ENST00000354757 IMPG2Q9BZV3 1241 aa13.72□□□□□ -0.21
PCDHB11-201ENST00000354757 PTPREP23469 700 aa13.72□□□□□ -0.21
PCDHB11-201ENST00000354757 HMGCS2P54868 508 aa13.72□□□□□ -0.21
PCDHB11-201ENST00000354757 CTTNQ14247 550 aaKnown RBP13.72□□□□□ -0.21
PCDHB11-201ENST00000354757 HLTFQ14527 1009 aaKnown RBP eCLIP13.72□□□□□ -0.21
PCDHB11-201ENST00000354757 GRM4Q14833 912 aa13.72□□□□□ -0.21
PCDHB11-201ENST00000354757 CCDC122Q5T0U0 273 aa13.72□□□□□ -0.21
PCDHB11-201ENST00000354757 IFT74Q96LB3 600 aa13.72□□□□□ -0.21
PCDHB11-201ENST00000354757 KCNJ18B7U540 433 aa13.71□□□□□ -0.21
PCDHB11-201ENST00000354757 GMPSP49915 693 aaPredicted RBP13.71□□□□□ -0.21
PCDHB11-201ENST00000354757 KCNJ12Q14500 433 aa13.71□□□□□ -0.21
PCDHB11-201ENST00000354757 GNPTABQ3T906 1256 aa13.71□□□□□ -0.21
PCDHB11-201ENST00000354757 ANGEL2Q5VTE6 544 aaKnown RBP13.71□□□□□ -0.21
PCDHB11-201ENST00000354757 KRT26Q7Z3Y9 468 aa13.71□□□□□ -0.21
PCDHB11-201ENST00000354757 NDUFB10O96000 172 aa13.71□□□□□ -0.21
PCDHB11-201ENST00000354757 ARHGAP44Q17R89 818 aa13.71□□□□□ -0.21
PCDHB11-201ENST00000354757 ODR4Q5SWX8 454 aa13.71□□□□□ -0.21
PCDHB11-201ENST00000354757 POTEDQ86YR6 584 aa13.71□□□□□ -0.21
PCDHB11-201ENST00000354757 MAN1B1Q9UKM7 699 aa13.71□□□□□ -0.21
PCDHB11-201ENST00000354757 RABGAP1Q9Y3P9 1069 aa13.71□□□□□ -0.21
PCDHB11-201ENST00000354757 MON2Q7Z3U7 1717 aa13.71□□□□□ -0.22
PCDHB11-201ENST00000354757 TICAM2Q86XR7 235 aa13.71□□□□□ -0.22
PCDHB11-201ENST00000354757 MYO3BQ8WXR4 1341 aa13.71□□□□□ -0.22
PCDHB11-201ENST00000354757 TEKT3Q9BXF9 490 aa13.71□□□□□ -0.22
PCDHB11-201ENST00000354757 RSBN1LQ6PCB5 846 aaPredicted RBP13.7□□□□□ -0.22
PCDHB11-201ENST00000354757 BHMT2Q9H2M3 363 aa13.7□□□□□ -0.22
PCDHB11-201ENST00000354757 SYNCQ9H7C4 482 aa13.7□□□□□ -0.22
PCDHB11-201ENST00000354757 CWC15Q9P013 229 aaKnown RBP13.7□□□□□ -0.22
PCDHB11-201ENST00000354757 ZNF70Q9UC06 446 aaPredicted RBP13.7□□□□□ -0.22
PCDHB11-201ENST00000354757 TRPC6Q9Y210 931 aa13.7□□□□□ -0.22
PCDHB11-201ENST00000354757 ERLIN1O75477 346 aa13.7□□□□□ -0.22
PCDHB11-201ENST00000354757 KRT5P13647 590 aa13.7□□□□□ -0.22
PCDHB11-201ENST00000354757 CNGA1P29973 690 aa13.7□□□□□ -0.22
PCDHB11-201ENST00000354757 SPECC1LQ69YQ0 1117 aa13.7□□□□□ -0.22
PCDHB11-201ENST00000354757 USP37Q86T82 979 aa13.7□□□□□ -0.22
PCDHB11-201ENST00000354757 MCF2L2Q86YR7 1114 aa13.7□□□□□ -0.22
PCDHB11-201ENST00000354757 DHX37Q8IY37 1157 aaKnown RBP13.7□□□□□ -0.22
PCDHB11-201ENST00000354757 SLFN12Q8IYM2 578 aa13.7□□□□□ -0.22
PCDHB11-201ENST00000354757 PPP1R16BQ96T49 567 aa13.7□□□□□ -0.22
PCDHB11-201ENST00000354757 NALCNQ8IZF0 1738 aa13.7□□□□□ -0.22
PCDHB11-201ENST00000354757 TROAPQ12815 778 aa13.7□□□□□ -0.22
PCDHB11-201ENST00000354757 RRAGAQ7L523 313 aa13.7□□□□□ -0.22
PCDHB11-201ENST00000354757 FBXO28Q9NVF7 368 aa13.7□□□□□ -0.22
PCDHB11-201ENST00000354757 GGA3Q9NZ52 723 aa13.7□□□□□ -0.22
PCDHB11-201ENST00000354757 PCDHAC2Q9Y5I4 1007 aa13.7□□□□□ -0.22
PCDHB11-201ENST00000354757 MED1Q15648 1581 aaPredicted RBP13.7□□□□□ -0.22
PCDHB11-201ENST00000354757 CLIC2O15247 247 aa13.69□□□□□ -0.22
PCDHB11-201ENST00000354757 KCTD2Q14681 263 aa13.69□□□□□ -0.22
PCDHB11-201ENST00000354757 SHC4Q6S5L8 630 aa13.69□□□□□ -0.22
PCDHB11-201ENST00000354757 PCDHA6Q9UN73 950 aa13.69□□□□□ -0.22
PCDHB11-201ENST00000354757 PCDHA8Q9Y5H6 950 aa13.69□□□□□ -0.22
PCDHB11-201ENST00000354757 KIF1AQ12756 1690 aa13.69□□□□□ -0.22
PCDHB11-201ENST00000354757 K7ENM7 598 aa13.69□□□□□ -0.22
PCDHB11-201ENST00000354757 STAT3P40763 770 aa13.69□□□□□ -0.22
PCDHB11-201ENST00000354757 RASSF7Q02833 373 aa13.69□□□□□ -0.22
PCDHB11-201ENST00000354757 CUL4BQ13620 913 aa13.69□□□□□ -0.22
PCDHB11-201ENST00000354757 RCSD1Q6JBY9 416 aa13.69□□□□□ -0.22
PCDHB11-201ENST00000354757 BARHL2Q9NY43 387 aa13.69□□□□□ -0.22
PCDHB11-201ENST00000354757 LRRIQ4A6NIV6 560 aa13.69□□□□□ -0.22
PCDHB11-201ENST00000354757 KRT86O43790 486 aa13.69□□□□□ -0.22
PCDHB11-201ENST00000354757 GRIN1Q05586 938 aa13.69□□□□□ -0.22
PCDHB11-201ENST00000354757 NBPF9Q3BBW0 867 aa13.69□□□□□ -0.22
PCDHB11-201ENST00000354757 SBK1Q52WX2 424 aa13.69□□□□□ -0.22
PCDHB11-201ENST00000354757 PAGE5Q96GU1 130 aa13.69□□□□□ -0.22
PCDHB11-201ENST00000354757 WDR19Q8NEZ3 1342 aa13.69□□□□□ -0.22
PCDHB11-201ENST00000354757 KDM3AQ9Y4C1 1321 aa13.69□□□□□ -0.22
PCDHB11-201ENST00000354757 GOLGA6L9A6NEM1 432 aa13.68□□□□□ -0.22
PCDHB11-201ENST00000354757 DDTLA6NHG4 134 aaPredicted RBP13.68□□□□□ -0.22
PCDHB11-201ENST00000354757 PRR29P0C7W0 189 aa13.68□□□□□ -0.22
PCDHB11-201ENST00000354757 MTMR2Q13614 643 aa13.68□□□□□ -0.22
PCDHB11-201ENST00000354757 ARID5BQ14865 1188 aa13.68□□□□□ -0.22
PCDHB11-201ENST00000354757 FAM47CQ5HY64 1035 aa13.68□□□□□ -0.22
PCDHB11-201ENST00000354757 NOD1Q9Y239 953 aa13.68□□□□□ -0.22
PCDHB11-201ENST00000354757 TCRBV5S4A2TA0A5A2 114 aa13.68□□□□□ -0.22
PCDHB11-201ENST00000354757 STRN3Q13033 797 aa13.68□□□□□ -0.22
PCDHB11-201ENST00000354757 TYW1BQ6NUM6 668 aa13.68□□□□□ -0.22
PCDHB11-201ENST00000354757 POTEAQ6S8J7 498 aa13.68□□□□□ -0.22
PCDHB11-201ENST00000354757 DPP9Q86TI2 863 aa13.68□□□□□ -0.22
PCDHB11-201ENST00000354757 AMIGO3Q86WK7 504 aa13.68□□□□□ -0.22
PCDHB11-201ENST00000354757 SLC10A4Q96EP9 437 aa13.68□□□□□ -0.22
PCDHB11-201ENST00000354757 GSDMAQ96QA5 445 aa13.68□□□□□ -0.22
PCDHB11-201ENST00000354757 POTEB2H3BUK9 544 aa13.68□□□□□ -0.22
PCDHB11-201ENST00000354757 PDHBP11177 359 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms