RNA–Protein interactions for RNA: ENST00000354534.10

SCN8A-201, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN8A, Length 11,556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-201ENST00000354534 H0Y3Z8 333 aa8.72□□□□□ -1.01
SCN8A-201ENST00000354534 MCMDC2Q4G0Z9 681 aa8.72□□□□□ -1.01
SCN8A-201ENST00000354534 KRT77Q7Z794 578 aa8.72□□□□□ -1.01
SCN8A-201ENST00000354534 U2AF1L4Q8WU68 220 aaKnown RBP8.72□□□□□ -1.01
SCN8A-201ENST00000354534 LRRC37BQ96QE4 947 aa8.72□□□□□ -1.01
SCN8A-201ENST00000354534 PAPOLBQ9NRJ5 636 aaKnown RBP8.72□□□□□ -1.01
SCN8A-201ENST00000354534 PRG3Q9Y2Y8 225 aaPredicted RBP8.72□□□□□ -1.01
SCN8A-201ENST00000354534 EIF2AK4Q9P2K8 1649 aaKnown RBP8.72□□□□□ -1.01
SCN8A-201ENST00000354534 A0A087WUV0 522 aaPredicted RBP8.72□□□□□ -1.01
SCN8A-201ENST00000354534 ARHGEF35A5YM69 484 aa8.72□□□□□ -1.01
SCN8A-201ENST00000354534 GOLGA8IPA6NC78 632 aa8.72□□□□□ -1.01
SCN8A-201ENST00000354534 H7C0C1 242 aa8.72□□□□□ -1.01
SCN8A-201ENST00000354534 SCG2P13521 617 aa8.72□□□□□ -1.01
SCN8A-201ENST00000354534 S100A5P33763 92 aa8.72□□□□□ -1.01
SCN8A-201ENST00000354534 ATP5OP48047 213 aa8.72□□□□□ -1.01
SCN8A-201ENST00000354534 VCPP55072 806 aaKnown RBP8.72□□□□□ -1.01
SCN8A-201ENST00000354534 ADKP55263 362 aaKnown RBP8.72□□□□□ -1.01
SCN8A-201ENST00000354534 LRRC8BQ6P9F7 803 aa8.72□□□□□ -1.01
SCN8A-201ENST00000354534 RDH13Q8NBN7 331 aa8.72□□□□□ -1.01
SCN8A-201ENST00000354534 ARHGAP10A1A4S6 786 aa8.71□□□□□ -1.01
SCN8A-201ENST00000354534 HIBCHQ6NVY1 386 aaPredicted RBP8.71□□□□□ -1.01
SCN8A-201ENST00000354534 UNC45BQ8IWX7 931 aa8.71□□□□□ -1.01
SCN8A-201ENST00000354534 ZC3H15Q8WU90 426 aaKnown RBP8.71□□□□□ -1.01
SCN8A-201ENST00000354534 SYNJ2BP-COX16A0A087WUM0 186 aa8.71□□□□□ -1.01
SCN8A-201ENST00000354534 DEAF1O75398 565 aaPredicted RBP8.71□□□□□ -1.01
SCN8A-201ENST00000354534 CHGBP05060 677 aa8.71□□□□□ -1.01
SCN8A-201ENST00000354534 PLCD1P51178 756 aa8.71□□□□□ -1.01
SCN8A-201ENST00000354534 DMC1Q14565 340 aa8.71□□□□□ -1.01
SCN8A-201ENST00000354534 NCAPG2Q86XI2 1143 aa8.71□□□□□ -1.01
SCN8A-201ENST00000354534 COX16Q9P0S2 106 aa8.71□□□□□ -1.01
SCN8A-201ENST00000354534 GYG2O15488 501 aa8.71□□□□□ -1.01
SCN8A-201ENST00000354534 UQCRFS1P1P0C7P4 283 aa8.71□□□□□ -1.01
SCN8A-201ENST00000354534 HSPA1AP0DMV8 641 aaKnown RBP8.71□□□□□ -1.01
SCN8A-201ENST00000354534 HSPA1BP0DMV9 641 aaKnown RBP8.71□□□□□ -1.01
SCN8A-201ENST00000354534 TRIM27P14373 513 aa8.71□□□□□ -1.01
SCN8A-201ENST00000354534 ARHGEF18Q6ZSZ5 1173 aa8.71□□□□□ -1.01
SCN8A-201ENST00000354534 FAM167BQ9BTA0 163 aa8.71□□□□□ -1.01
SCN8A-201ENST00000354534 ZNF408Q9H9D4 720 aa8.71□□□□□ -1.01
SCN8A-201ENST00000354534 ST5P78524 1137 aa8.71□□□□□ -1.02
SCN8A-201ENST00000354534 GUCY2DQ02846 1103 aa8.71□□□□□ -1.02
SCN8A-201ENST00000354534 KCNV2Q8TDN2 545 aa8.71□□□□□ -1.02
SCN8A-201ENST00000354534 DEPDC1BQ8WUY9 529 aa8.71□□□□□ -1.02
SCN8A-201ENST00000354534 LOC102724159A0A0B4J2E5 919 aa8.71□□□□□ -1.02
SCN8A-201ENST00000354534 COPB1P53618 953 aaKnown RBP8.71□□□□□ -1.02
SCN8A-201ENST00000354534 PWP2Q15269 919 aaKnown RBP8.71□□□□□ -1.02
SCN8A-201ENST00000354534 KRT27Q7Z3Y8 459 aa8.71□□□□□ -1.02
SCN8A-201ENST00000354534 PLD3Q8IV08 490 aa8.71□□□□□ -1.02
SCN8A-201ENST00000354534 RFWD2Q8NHY2 731 aa8.71□□□□□ -1.02
SCN8A-201ENST00000354534 IL16Q14005 1332 aa8.71□□□□□ -1.02
SCN8A-201ENST00000354534 ANP32DO95626 131 aa8.71□□□□□ -1.02
SCN8A-201ENST00000354534 PLIN5Q00G26 463 aa8.71□□□□□ -1.02
SCN8A-201ENST00000354534 TMA7Q9Y2S6 64 aaKnown RBP8.71□□□□□ -1.02
SCN8A-201ENST00000354534 KIF1CO43896 1103 aaKnown RBP8.71□□□□□ -1.02
SCN8A-201ENST00000354534 XPAP23025 273 aaPredicted RBP8.71□□□□□ -1.02
SCN8A-201ENST00000354534 YARSP54577 528 aaKnown RBP8.71□□□□□ -1.02
SCN8A-201ENST00000354534 CUL3Q13618 768 aa8.71□□□□□ -1.02
SCN8A-201ENST00000354534 PDZD4Q76G19 769 aaPredicted RBP8.71□□□□□ -1.02
SCN8A-201ENST00000354534 BRD8Q9H0E9 1235 aa8.71□□□□□ -1.02
SCN8A-201ENST00000354534 TAB2Q9NYJ8 693 aa8.71□□□□□ -1.02
SCN8A-201ENST00000354534 MAGEB6P1A0A0J9YX57 407 aa8.71□□□□□ -1.02
SCN8A-201ENST00000354534 NLRC4Q9NPP4 1024 aa8.71□□□□□ -1.02
SCN8A-201ENST00000354534 TRPC6Q9Y210 931 aa8.71□□□□□ -1.02
SCN8A-201ENST00000354534 TCP11X2Q5H9J9 407 aa8.7□□□□□ -1.02
SCN8A-201ENST00000354534 CCDC103Q8IW40 242 aa8.7□□□□□ -1.02
SCN8A-201ENST00000354534 ACTR5Q9H9F9 607 aaPredicted RBP8.7□□□□□ -1.02
SCN8A-201ENST00000354534 RRAGDQ9NQL2 400 aaPredicted RBP8.7□□□□□ -1.02
SCN8A-201ENST00000354534 CTNND1O60716 968 aaKnown RBP8.7□□□□□ -1.02
SCN8A-201ENST00000354534 TRIM37O94972 964 aa8.7□□□□□ -1.02
SCN8A-201ENST00000354534 AP2B1P63010 937 aa8.7□□□□□ -1.02
SCN8A-201ENST00000354534 HDAC1Q13547 482 aaPredicted RBP8.7□□□□□ -1.02
SCN8A-201ENST00000354534 AARS2Q5JTZ9 985 aaKnown RBP8.7□□□□□ -1.02
SCN8A-201ENST00000354534 NAA35Q5VZE5 725 aa8.7□□□□□ -1.02
SCN8A-201ENST00000354534 NELFBQ8WX92 580 aa8.7□□□□□ -1.02
SCN8A-201ENST00000354534 TEX13AQ9BXU3 409 aaPredicted RBP8.7□□□□□ -1.02
SCN8A-201ENST00000354534 SEC24DO94855 1032 aaPredicted RBP8.7□□□□□ -1.02
SCN8A-201ENST00000354534 ZNF75DP51815 510 aa8.7□□□□□ -1.02
SCN8A-201ENST00000354534 FGD2Q7Z6J4 655 aa8.7□□□□□ -1.02
SCN8A-201ENST00000354534 THAP11Q96EK4 314 aa8.7□□□□□ -1.02
SCN8A-201ENST00000354534 SOX13Q9UN79 622 aa8.7□□□□□ -1.02
SCN8A-201ENST00000354534 SOX5P35711 763 aa8.7□□□□□ -1.02
SCN8A-201ENST00000354534 OTUD6AQ7L8S5 288 aa8.7□□□□□ -1.02
SCN8A-201ENST00000354534 ZBED2Q9BTP6 218 aa8.7□□□□□ -1.02
SCN8A-201ENST00000354534 LSM14BQ9BX40 385 aaKnown RBP8.7□□□□□ -1.02
SCN8A-201ENST00000354534 FAM207AQ9NSI2 230 aaPredicted RBP8.7□□□□□ -1.02
SCN8A-201ENST00000354534 PASKQ96RG2 1323 aa8.7□□□□□ -1.02
SCN8A-201ENST00000354534 RIMBP2O15034 1052 aa8.7□□□□□ -1.02
SCN8A-201ENST00000354534 CPP00450 1065 aa8.7□□□□□ -1.02
SCN8A-201ENST00000354534 AARSP49588 968 aaKnown RBP eCLIP8.7□□□□□ -1.02
SCN8A-201ENST00000354534 HDLBPQ00341 1268 aaKnown RBP8.7□□□□□ -1.02
SCN8A-201ENST00000354534 MCTP2Q6DN12 878 aa8.7□□□□□ -1.02
SCN8A-201ENST00000354534 NFRKBQ6P4R8 1299 aa8.7□□□□□ -1.02
SCN8A-201ENST00000354534 STK24Q9Y6E0 443 aa8.7□□□□□ -1.02
SCN8A-201ENST00000354534 FNDC3AQ9Y2H6 1198 aaKnown RBP8.7□□□□□ -1.02
SCN8A-201ENST00000354534 SMCO2A6NFE2 343 aa8.7□□□□□ -1.02
SCN8A-201ENST00000354534 ESRRBO95718 433 aa8.7□□□□□ -1.02
SCN8A-201ENST00000354534 HSPD1P10809 573 aaKnown RBP8.7□□□□□ -1.02
SCN8A-201ENST00000354534 TEKT4Q8WW24 435 aa8.7□□□□□ -1.02
SCN8A-201ENST00000354534 A6NJR5 290 aa8.7□□□□□ -1.02
SCN8A-201ENST00000354534 STAT1P42224 750 aa8.7□□□□□ -1.02
SCN8A-201ENST00000354534 ST13P5Q8NFI4 369 aaPredicted RBP8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms