RNA–Protein interactions for RNA: ENST00000354506.10

RPE-201, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 2 BASIC

Gene RPE, Length 3,165 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-201ENST00000354506 AARSP49588 968 aaKnown RBP eCLIP10.72□□□□□ -0.69
RPE-201ENST00000354506 ANKRD40Q6AI12 368 aa10.72□□□□□ -0.69
RPE-201ENST00000354506 BARGINQ6ZT62 677 aa10.72□□□□□ -0.69
RPE-201ENST00000354506 TRIM47Q96LD4 638 aa10.72□□□□□ -0.69
RPE-201ENST00000354506 NUP58Q9BVL2 599 aa10.72□□□□□ -0.69
RPE-201ENST00000354506 ANKRD2Q9GZV1 360 aa10.72□□□□□ -0.69
RPE-201ENST00000354506 MCM9Q9NXL9 1143 aa10.72□□□□□ -0.69
RPE-201ENST00000354506 SAMM50Q9Y512 469 aa10.72□□□□□ -0.69
RPE-201ENST00000354506 SPATA31A5Q5VU36 1347 aa10.72□□□□□ -0.69
RPE-201ENST00000354506 SPATA31A7Q8IWB4 1347 aa10.72□□□□□ -0.69
RPE-201ENST00000354506 CNTNAP4Q9C0A0 1308 aa10.72□□□□□ -0.69
RPE-201ENST00000354506 EIF3CLB5ME19 914 aaKnown RBP10.72□□□□□ -0.69
RPE-201ENST00000354506 PDE2AO00408 941 aaPredicted RBP10.72□□□□□ -0.69
RPE-201ENST00000354506 GNAQP50148 359 aa10.72□□□□□ -0.69
RPE-201ENST00000354506 PPP4CP60510 307 aa10.72□□□□□ -0.69
RPE-201ENST00000354506 KCTD16Q68DU8 428 aa10.72□□□□□ -0.69
RPE-201ENST00000354506 CCDC170Q8IYT3 715 aa10.72□□□□□ -0.69
RPE-201ENST00000354506 SMARCC1Q92922 1105 aaPredicted RBP10.72□□□□□ -0.69
RPE-201ENST00000354506 RRP36Q96EU6 259 aaKnown RBP10.72□□□□□ -0.69
RPE-201ENST00000354506 ERGIC2Q96RQ1 377 aa10.72□□□□□ -0.69
RPE-201ENST00000354506 EIF3CQ99613 913 aaKnown RBP10.72□□□□□ -0.69
RPE-201ENST00000354506 TUBGCP2Q9BSJ2 902 aa10.72□□□□□ -0.69
RPE-201ENST00000354506 MMTAG2Q9BU76 263 aaKnown RBP10.72□□□□□ -0.69
RPE-201ENST00000354506 TRIM9Q9C026 710 aa10.72□□□□□ -0.69
RPE-201ENST00000354506 FAM107BQ9H098 131 aa10.72□□□□□ -0.69
RPE-201ENST00000354506 EXOC1Q9NV70 894 aa10.72□□□□□ -0.69
RPE-201ENST00000354506 NAV1Q8NEY1 1877 aa10.72□□□□□ -0.69
RPE-201ENST00000354506 TARSL2A2RTX5 802 aaKnown RBP10.71□□□□□ -0.69
RPE-201ENST00000354506 NCK2O43639 380 aa10.71□□□□□ -0.69
RPE-201ENST00000354506 TRIM21P19474 475 aaKnown RBP10.71□□□□□ -0.69
RPE-201ENST00000354506 NAP1L1P55209 391 aaKnown RBP10.71□□□□□ -0.69
RPE-201ENST00000354506 INF2Q27J81 1249 aa10.71□□□□□ -0.69
RPE-201ENST00000354506 CCDC178Q5BJE1 867 aa10.71□□□□□ -0.69
RPE-201ENST00000354506 ZNF572Q7Z3I7 529 aaPredicted RBP10.71□□□□□ -0.69
RPE-201ENST00000354506 TMC4Q7Z404 712 aa10.71□□□□□ -0.69
RPE-201ENST00000354506 SRLQ86TD4 932 aa10.71□□□□□ -0.69
RPE-201ENST00000354506 DYNLL2Q96FJ2 89 aa10.71□□□□□ -0.69
RPE-201ENST00000354506 USP17L3A6NCW0 530 aa10.71□□□□□ -0.69
RPE-201ENST00000354506 USP17L4A6NCW7 530 aa10.71□□□□□ -0.69
RPE-201ENST00000354506 EDIL3O43854 480 aa10.71□□□□□ -0.69
RPE-201ENST00000354506 LCA5LO95447 670 aa10.71□□□□□ -0.69
RPE-201ENST00000354506 SYF2O95926 243 aaKnown RBP10.71□□□□□ -0.69
RPE-201ENST00000354506 CCNE1P24864 410 aa10.71□□□□□ -0.69
RPE-201ENST00000354506 GGCXP38435 758 aa10.71□□□□□ -0.69
RPE-201ENST00000354506 STK4Q13043 487 aa10.71□□□□□ -0.69
RPE-201ENST00000354506 USP17L1Q7RTZ2 530 aa10.71□□□□□ -0.69
RPE-201ENST00000354506 GOLGA5Q8TBA6 731 aa10.71□□□□□ -0.69
RPE-201ENST00000354506 NHEJ1Q9H9Q4 299 aaPredicted RBP10.71□□□□□ -0.69
RPE-201ENST00000354506 ESYT3A0FGR9 886 aa10.71□□□□□ -0.7
RPE-201ENST00000354506 PSMA7O14818 248 aa10.71□□□□□ -0.7
RPE-201ENST00000354506 ZNF263O14978 683 aa10.71□□□□□ -0.7
RPE-201ENST00000354506 KRT83P78385 493 aa10.71□□□□□ -0.7
RPE-201ENST00000354506 ZBED6P86452 979 aa10.71□□□□□ -0.7
RPE-201ENST00000354506 ARID5AQ03989 594 aa10.71□□□□□ -0.7
RPE-201ENST00000354506 TXNRD1Q16881 649 aa10.71□□□□□ -0.7
RPE-201ENST00000354506 LRRC31Q6UY01 552 aa10.71□□□□□ -0.7
RPE-201ENST00000354506 CCDC155Q8N6L0 562 aa10.71□□□□□ -0.7
RPE-201ENST00000354506 SH3RF3Q8TEJ3 882 aaPredicted RBP10.71□□□□□ -0.7
RPE-201ENST00000354506 P2RX5Q93086 422 aa10.71□□□□□ -0.7
RPE-201ENST00000354506 TMEM47Q9BQJ4 181 aa10.71□□□□□ -0.7
RPE-201ENST00000354506 SPZ1Q9BXG8 430 aa10.71□□□□□ -0.7
RPE-201ENST00000354506 GBP3Q9H0R5 595 aa10.71□□□□□ -0.7
RPE-201ENST00000354506 MLXIPQ9HAP2 919 aa10.71□□□□□ -0.7
RPE-201ENST00000354506 FAM207AQ9NSI2 230 aaPredicted RBP10.71□□□□□ -0.7
RPE-201ENST00000354506 SAR1BQ9Y6B6 198 aa10.71□□□□□ -0.7
RPE-201ENST00000354506 CCDC194A0A1B0GVG4 234 aa10.7□□□□□ -0.7
RPE-201ENST00000354506 PRPF6O94906 941 aaKnown RBP10.7□□□□□ -0.7
RPE-201ENST00000354506 SMARCA1P28370 1054 aa10.7□□□□□ -0.7
RPE-201ENST00000354506 LIG3P49916 1009 aa10.7□□□□□ -0.7
RPE-201ENST00000354506 ATP1A2P50993 1020 aa10.7□□□□□ -0.7
RPE-201ENST00000354506 SLC20A2Q08357 652 aa10.7□□□□□ -0.7
RPE-201ENST00000354506 GOLGA6L1Q8N7Z2 621 aa10.7□□□□□ -0.7
RPE-201ENST00000354506 CCDC148Q8NFR7 591 aa10.7□□□□□ -0.7
RPE-201ENST00000354506 LZTS2Q9BRK4 669 aa10.7□□□□□ -0.7
RPE-201ENST00000354506 TNRC6CQ9HCJ0 1690 aaKnown RBP10.7□□□□□ -0.7
RPE-201ENST00000354506 IDEP14735 1019 aa10.7□□□□□ -0.7
RPE-201ENST00000354506 PLCG1P19174 1290 aa10.7□□□□□ -0.7
RPE-201ENST00000354506 RASA1P20936 1047 aa10.7□□□□□ -0.7
RPE-201ENST00000354506 UBA7P41226 1012 aa10.7□□□□□ -0.7
RPE-201ENST00000354506 CCT5P48643 541 aa10.7□□□□□ -0.7
RPE-201ENST00000354506 CENPPQ6IPU0 288 aa10.7□□□□□ -0.7
RPE-201ENST00000354506 FAM71BQ8TC56 605 aa10.7□□□□□ -0.7
RPE-201ENST00000354506 GJA10Q969M2 543 aa10.7□□□□□ -0.7
RPE-201ENST00000354506 RPGRIP1Q96KN7 1286 aa10.7□□□□□ -0.7
RPE-201ENST00000354506 ANO9A1A5B4 782 aa10.69□□□□□ -0.7
RPE-201ENST00000354506 EIF3JO75822 258 aaKnown RBP10.69□□□□□ -0.7
RPE-201ENST00000354506 FCER1AP12319 257 aa10.69□□□□□ -0.7
RPE-201ENST00000354506 APBA1Q02410 837 aa10.69□□□□□ -0.7
RPE-201ENST00000354506 PDE4CQ08493 712 aa10.69□□□□□ -0.7
RPE-201ENST00000354506 GRIK5Q16478 980 aa10.69□□□□□ -0.7
RPE-201ENST00000354506 CCDC96Q2M329 555 aa10.69□□□□□ -0.7
RPE-201ENST00000354506 SPTY2D1Q68D10 685 aaPredicted RBP10.69□□□□□ -0.7
RPE-201ENST00000354506 SND1Q7KZF4 910 aaKnown RBP eCLIP10.69□□□□□ -0.7
RPE-201ENST00000354506 PACS2Q86VP3 889 aa10.69□□□□□ -0.7
RPE-201ENST00000354506 SH2D3CQ8N5H7 860 aa10.69□□□□□ -0.7
RPE-201ENST00000354506 CSGALNACT2Q8N6G5 542 aa10.69□□□□□ -0.7
RPE-201ENST00000354506 KIAA0895Q8NCT3 520 aa10.69□□□□□ -0.7
RPE-201ENST00000354506 NLRP3Q96P20 1036 aa10.69□□□□□ -0.7
RPE-201ENST00000354506 MTMR9Q96QG7 549 aa10.69□□□□□ -0.7
RPE-201ENST00000354506 NYXQ9GZU5 481 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms