RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 LRRC47Q8N1G4 583 aaKnown RBP18.91■□□□□ 0.62
DDX55-202ENST00000354291 MTG1Q9BT17 334 aaPredicted RBP18.91■□□□□ 0.62
DDX55-202ENST00000354291 SUGCTQ9HAC7 445 aa18.91■□□□□ 0.62
DDX55-202ENST00000354291 ZNF536O15090 1300 aa18.91■□□□□ 0.62
DDX55-202ENST00000354291 CHMP4BP1P59074 171 aa18.9■□□□□ 0.62
DDX55-202ENST00000354291 DUSP28Q4G0W2 176 aa18.9■□□□□ 0.62
DDX55-202ENST00000354291 SLFN13Q68D06 897 aa18.9■□□□□ 0.62
DDX55-202ENST00000354291 ZNF444Q8N0Y2 327 aaPredicted RBP18.9■□□□□ 0.62
DDX55-202ENST00000354291 PURBQ96QR8 312 aaKnown RBP18.9■□□□□ 0.62
DDX55-202ENST00000354291 WDR11Q9BZH6 1224 aa18.9■□□□□ 0.62
DDX55-202ENST00000354291 VTA1Q9NP79 307 aa18.9■□□□□ 0.62
DDX55-202ENST00000354291 ARPP21Q9UBL0 812 aaPredicted RBP18.9■□□□□ 0.62
DDX55-202ENST00000354291 NOD1Q9Y239 953 aa18.9■□□□□ 0.62
DDX55-202ENST00000354291 PITPNM1O00562 1244 aa18.89■□□□□ 0.61
DDX55-202ENST00000354291 BAIAP3O94812 1187 aa18.89■□□□□ 0.61
DDX55-202ENST00000354291 FDX1P10109 184 aa18.89■□□□□ 0.61
DDX55-202ENST00000354291 CPT1AP50416 773 aa18.89■□□□□ 0.61
DDX55-202ENST00000354291 SNAP25P60880 206 aa18.89■□□□□ 0.61
DDX55-202ENST00000354291 BFSP2Q13515 415 aa18.89■□□□□ 0.61
DDX55-202ENST00000354291 HSP90AB4PQ58FF6 505 aa18.89■□□□□ 0.61
DDX55-202ENST00000354291 MKL1Q969V6 931 aa18.89■□□□□ 0.61
DDX55-202ENST00000354291 CEP95Q96GE4 821 aa18.89■□□□□ 0.61
DDX55-202ENST00000354291 PUS7LQ9H0K6 701 aaKnown RBP18.89■□□□□ 0.61
DDX55-202ENST00000354291 DCXO43602 365 aa18.88■□□□□ 0.61
DDX55-202ENST00000354291 PRDM1O75626 825 aa18.88■□□□□ 0.61
DDX55-202ENST00000354291 UBE3CQ15386 1083 aa18.88■□□□□ 0.61
DDX55-202ENST00000354291 TKFCQ3LXA3 575 aa18.88■□□□□ 0.61
DDX55-202ENST00000354291 MUM1L1Q5H9M0 696 aa18.88■□□□□ 0.61
DDX55-202ENST00000354291 NSMFQ6X4W1 530 aa18.88■□□□□ 0.61
DDX55-202ENST00000354291 OR6J1Q8NGC5 347 aa18.88■□□□□ 0.61
DDX55-202ENST00000354291 CHURC1Q8WUH1 139 aa18.88■□□□□ 0.61
DDX55-202ENST00000354291 TGS1Q96RS0 853 aaKnown RBP18.88■□□□□ 0.61
DDX55-202ENST00000354291 MTMR4Q9NYA4 1195 aa18.88■□□□□ 0.61
DDX55-202ENST00000354291 CYP39A1Q9NYL5 469 aa18.88■□□□□ 0.61
DDX55-202ENST00000354291 IGKV6D-41A0A0C4DH26 115 aa18.87■□□□□ 0.61
DDX55-202ENST00000354291 GRXCR2A6NFK2 248 aa18.87■□□□□ 0.61
DDX55-202ENST00000354291 TTLL1O95922 423 aa18.87■□□□□ 0.61
DDX55-202ENST00000354291 STAT2P52630 851 aa18.87■□□□□ 0.61
DDX55-202ENST00000354291 WDR5P61964 334 aaKnown RBP18.87■□□□□ 0.61
DDX55-202ENST00000354291 SBK1Q52WX2 424 aa18.87■□□□□ 0.61
DDX55-202ENST00000354291 BRDTQ58F21 947 aaPredicted RBP18.87■□□□□ 0.61
DDX55-202ENST00000354291 RPAP2Q8IXW5 612 aaPredicted RBP18.87■□□□□ 0.61
DDX55-202ENST00000354291 GMCL1P1Q8NEA9 526 aa18.87■□□□□ 0.61
DDX55-202ENST00000354291 TET1Q8NFU7 2136 aa18.87■□□□□ 0.61
DDX55-202ENST00000354291 PANK1Q8TE04 598 aa18.87■□□□□ 0.61
DDX55-202ENST00000354291 CRBNQ96SW2 442 aa18.87■□□□□ 0.61
DDX55-202ENST00000354291 KCNH6Q9H252 994 aa18.87■□□□□ 0.61
DDX55-202ENST00000354291 TRIOO75962 3097 aa18.87■□□□□ 0.61
DDX55-202ENST00000354291 ERVK-21P61565 698 aa18.86■□□□□ 0.61
DDX55-202ENST00000354291 DEFB103AP81534 67 aa18.86■□□□□ 0.61
DDX55-202ENST00000354291 FAM117BQ6P1L5 589 aa18.86■□□□□ 0.61
DDX55-202ENST00000354291 NFRKBQ6P4R8 1299 aa18.86■□□□□ 0.61
DDX55-202ENST00000354291 STAG1Q8WVM7 1258 aa18.86■□□□□ 0.61
DDX55-202ENST00000354291 RAD9AQ99638 391 aa18.86■□□□□ 0.61
DDX55-202ENST00000354291 H3BQ06 376 aaPredicted RBP18.85■□□□□ 0.61
DDX55-202ENST00000354291 MCCP23508 829 aa18.85■□□□□ 0.61
DDX55-202ENST00000354291 EP400NLQ6ZTU2 488 aa18.85■□□□□ 0.61
DDX55-202ENST00000354291 FAM160B2Q86V87 743 aa18.85■□□□□ 0.61
DDX55-202ENST00000354291 ANKS1AQ92625 1134 aa18.85■□□□□ 0.61
DDX55-202ENST00000354291 KIF1BPQ96EK5 621 aa18.85■□□□□ 0.61
DDX55-202ENST00000354291 STRBPQ96SI9 672 aaKnown RBP18.85■□□□□ 0.61
DDX55-202ENST00000354291 POTEB3A0JP26 581 aa18.84■□□□□ 0.61
DDX55-202ENST00000354291 LINC01553A4QN01 128 aa18.84■□□□□ 0.61
DDX55-202ENST00000354291 GSG1L2A8MUP6 293 aa18.84■□□□□ 0.61
DDX55-202ENST00000354291 SLC1A4P43007 532 aa18.84■□□□□ 0.61
DDX55-202ENST00000354291 PTGISQ16647 500 aa18.84■□□□□ 0.61
DDX55-202ENST00000354291 PUS10Q3MIT2 529 aaKnown RBP18.84■□□□□ 0.61
DDX55-202ENST00000354291 ZSCAN25Q6NSZ9 544 aa18.84■□□□□ 0.61
DDX55-202ENST00000354291 POTEBQ6S5H4 581 aa18.84■□□□□ 0.61
DDX55-202ENST00000354291 HAUS7Q99871 368 aa18.84■□□□□ 0.61
DDX55-202ENST00000354291 GJB5O95377 273 aa18.83■□□□□ 0.6
DDX55-202ENST00000354291 ATP5JP18859 108 aa18.83■□□□□ 0.6
DDX55-202ENST00000354291 BAATQ14032 418 aaPredicted RBP18.83■□□□□ 0.6
DDX55-202ENST00000354291 LRRFIP1Q32MZ4 808 aaKnown RBP18.83■□□□□ 0.6
DDX55-202ENST00000354291 HFE2Q6ZVN8 426 aa18.83■□□□□ 0.6
DDX55-202ENST00000354291 MORC4Q8TE76 937 aa18.83■□□□□ 0.6
DDX55-202ENST00000354291 ZNF287Q9HBT7 754 aa18.83■□□□□ 0.6
DDX55-202ENST00000354291 ADD3Q9UEY8 706 aaKnown RBP18.83■□□□□ 0.6
DDX55-202ENST00000354291 CCPG1Q9ULG6 757 aa18.83■□□□□ 0.6
DDX55-202ENST00000354291 SYNPO2Q9UMS6 1093 aa18.83■□□□□ 0.6
DDX55-202ENST00000354291 KPNA6O60684 536 aa18.82■□□□□ 0.6
DDX55-202ENST00000354291 PTPN11Q06124 597 aaPredicted RBP18.82■□□□□ 0.6
DDX55-202ENST00000354291 GPNMBQ14956 572 aa18.82■□□□□ 0.6
DDX55-202ENST00000354291 KCTD1Q719H9 257 aa18.82■□□□□ 0.6
DDX55-202ENST00000354291 CCDC155Q8N6L0 562 aa18.82■□□□□ 0.6
DDX55-202ENST00000354291 PHOX2BQ99453 314 aa18.82■□□□□ 0.6
DDX55-202ENST00000354291 CHMP4BQ9H444 224 aaKnown RBP18.82■□□□□ 0.6
DDX55-202ENST00000354291 DDX19BQ9UMR2 479 aa18.82■□□□□ 0.6
DDX55-202ENST00000354291 RAD50Q92878 1312 aa18.81■□□□□ 0.6
DDX55-202ENST00000354291 RBAK-RBAKDNI3L0D1 243 aa18.81■□□□□ 0.6
DDX55-202ENST00000354291 APPP05067 770 aa18.81■□□□□ 0.6
DDX55-202ENST00000354291 TSPY3P0CV98 308 aa18.81■□□□□ 0.6
DDX55-202ENST00000354291 TSPY8P0CW00 308 aa18.81■□□□□ 0.6
DDX55-202ENST00000354291 ALDH5A1P51649 535 aaPredicted RBP18.81■□□□□ 0.6
DDX55-202ENST00000354291 CNKSR3Q6P9H4 555 aa18.81■□□□□ 0.6
DDX55-202ENST00000354291 FBXO22Q8NEZ5 403 aa18.81■□□□□ 0.6
DDX55-202ENST00000354291 NEK9Q8TD19 979 aa18.81■□□□□ 0.6
DDX55-202ENST00000354291 AFAP1L1Q8TED9 768 aa18.81■□□□□ 0.6
DDX55-202ENST00000354291 COPS5Q92905 334 aa18.81■□□□□ 0.6
DDX55-202ENST00000354291 MFSD14AQ96MC6 490 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms