RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 GPRC5DQ9NZD1 345 aa9.71□□□□□ -0.86
TRIM55-204ENST00000353317 SERTAD1Q9UHV2 236 aa9.71□□□□□ -0.86
TRIM55-204ENST00000353317 PCDHB6Q9Y5E3 794 aa9.71□□□□□ -0.86
TRIM55-204ENST00000353317 MRFAP1Q9Y605 127 aa9.71□□□□□ -0.86
TRIM55-204ENST00000353317 TBC1D8O95759 1140 aa9.7□□□□□ -0.86
TRIM55-204ENST00000353317 CASQ1P31415 396 aa9.7□□□□□ -0.86
TRIM55-204ENST00000353317 MAP3K10Q02779 954 aa9.7□□□□□ -0.86
TRIM55-204ENST00000353317 ZNF543Q08ER8 600 aa9.7□□□□□ -0.86
TRIM55-204ENST00000353317 MORC3Q14149 939 aa9.7□□□□□ -0.86
TRIM55-204ENST00000353317 NBPF12Q5TAG4 269 aaPredicted RBP9.7□□□□□ -0.86
TRIM55-204ENST00000353317 ENOX1Q8TC92 643 aaKnown RBP9.7□□□□□ -0.86
TRIM55-204ENST00000353317 WASF1Q92558 559 aa9.7□□□□□ -0.86
TRIM55-204ENST00000353317 DESI2Q9BSY9 194 aa9.7□□□□□ -0.86
TRIM55-204ENST00000353317 RIOX1Q9H6W3 641 aa9.7□□□□□ -0.86
TRIM55-204ENST00000353317 CABP5Q9NP86 173 aa9.7□□□□□ -0.86
TRIM55-204ENST00000353317 SAMSN1Q9NSI8 373 aaKnown RBP9.7□□□□□ -0.86
TRIM55-204ENST00000353317 GOLGA6L9A6NEM1 432 aa9.7□□□□□ -0.86
TRIM55-204ENST00000353317 M0R2N6 131 aa9.7□□□□□ -0.86
TRIM55-204ENST00000353317 STXBP3O00186 592 aa9.7□□□□□ -0.86
TRIM55-204ENST00000353317 TPM1P09493 284 aa9.7□□□□□ -0.86
TRIM55-204ENST00000353317 TAL1P17542 331 aaPredicted RBP9.7□□□□□ -0.86
TRIM55-204ENST00000353317 SNAP25P60880 206 aa9.7□□□□□ -0.86
TRIM55-204ENST00000353317 AKAP17AQ02040 695 aaKnown RBP9.7□□□□□ -0.86
TRIM55-204ENST00000353317 ICA1Q05084 483 aa9.7□□□□□ -0.86
TRIM55-204ENST00000353317 DGKZQ13574 1117 aa9.7□□□□□ -0.86
TRIM55-204ENST00000353317 MTF1Q14872 753 aa9.7□□□□□ -0.86
TRIM55-204ENST00000353317 CC2D1AQ6P1N0 951 aaPredicted RBP9.7□□□□□ -0.86
TRIM55-204ENST00000353317 TMEM179Q6ZVK1 233 aa9.7□□□□□ -0.86
TRIM55-204ENST00000353317 USP49Q70CQ1 688 aa9.7□□□□□ -0.86
TRIM55-204ENST00000353317 CREBRFQ8IUR6 639 aa9.7□□□□□ -0.86
TRIM55-204ENST00000353317 MLKLQ8NB16 471 aa9.7□□□□□ -0.86
TRIM55-204ENST00000353317 SPZ1Q9BXG8 430 aa9.7□□□□□ -0.86
TRIM55-204ENST00000353317 IRX2Q9BZI1 471 aaPredicted RBP9.7□□□□□ -0.86
TRIM55-204ENST00000353317 UBXN6Q9BZV1 441 aa9.7□□□□□ -0.86
TRIM55-204ENST00000353317 KANSL2Q9H9L4 492 aa9.7□□□□□ -0.86
TRIM55-204ENST00000353317 JMJD4Q9H9V9 463 aa9.7□□□□□ -0.86
TRIM55-204ENST00000353317 RNF181Q9P0P0 153 aa9.7□□□□□ -0.86
TRIM55-204ENST00000353317 NYAP2Q9P242 653 aa9.7□□□□□ -0.86
TRIM55-204ENST00000353317 HERC5Q9UII4 1024 aaKnown RBP9.7□□□□□ -0.86
TRIM55-204ENST00000353317 HOOK1Q9UJC3 728 aaKnown RBP9.7□□□□□ -0.86
TRIM55-204ENST00000353317 POLR3GO15318 223 aaPredicted RBP9.69□□□□□ -0.86
TRIM55-204ENST00000353317 RAD21O60216 631 aa9.69□□□□□ -0.86
TRIM55-204ENST00000353317 ATP2B1P20020 1258 aa9.69□□□□□ -0.86
TRIM55-204ENST00000353317 PPP2R3AQ06190 1150 aa9.69□□□□□ -0.86
TRIM55-204ENST00000353317 NR1I3Q14994 352 aa9.69□□□□□ -0.86
TRIM55-204ENST00000353317 ANGEL2Q5VTE6 544 aaKnown RBP9.69□□□□□ -0.86
TRIM55-204ENST00000353317 RSRC2Q7L4I2 434 aaKnown RBP9.69□□□□□ -0.86
TRIM55-204ENST00000353317 ADGRF4Q8IZF3 695 aa9.69□□□□□ -0.86
TRIM55-204ENST00000353317 SPICE1Q8N0Z3 855 aa9.69□□□□□ -0.86
TRIM55-204ENST00000353317 GPR161Q8N6U8 529 aaKnown RBP9.69□□□□□ -0.86
TRIM55-204ENST00000353317 SMARCE1Q969G3 411 aa9.69□□□□□ -0.86
TRIM55-204ENST00000353317 COA7Q96BR5 231 aa9.69□□□□□ -0.86
TRIM55-204ENST00000353317 DEFB129Q9H1M3 183 aa9.69□□□□□ -0.86
TRIM55-204ENST00000353317 FOXP1Q9H334 677 aaPredicted RBP9.69□□□□□ -0.86
TRIM55-204ENST00000353317 USP17L10C9JJH3 530 aa9.69□□□□□ -0.86
TRIM55-204ENST00000353317 F5H6K3 240 aa9.69□□□□□ -0.86
TRIM55-204ENST00000353317 KLRC3Q07444 240 aa9.69□□□□□ -0.86
TRIM55-204ENST00000353317 RILPL1Q5EBL4 403 aa9.69□□□□□ -0.86
TRIM55-204ENST00000353317 TEX35Q5T0J7 233 aa9.69□□□□□ -0.86
TRIM55-204ENST00000353317 HEATR3Q7Z4Q2 680 aa9.69□□□□□ -0.86
TRIM55-204ENST00000353317 GPC2Q8N158 579 aa9.69□□□□□ -0.86
TRIM55-204ENST00000353317 DHX58Q96C10 678 aa9.69□□□□□ -0.86
TRIM55-204ENST00000353317 TRIM34Q9BYJ4 488 aa9.69□□□□□ -0.86
TRIM55-204ENST00000353317 MRPL44Q9H9J2 332 aaKnown RBP9.69□□□□□ -0.86
TRIM55-204ENST00000353317 ZCCHC17Q9NP64 241 aaKnown RBP9.69□□□□□ -0.86
TRIM55-204ENST00000353317 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.69□□□□□ -0.86
TRIM55-204ENST00000353317 ZBTB21Q9ULJ3 1066 aa9.69□□□□□ -0.86
TRIM55-204ENST00000353317 ACTN4O43707 911 aaKnown RBP9.69□□□□□ -0.86
TRIM55-204ENST00000353317 TBC1D12O60347 775 aa9.69□□□□□ -0.86
TRIM55-204ENST00000353317 NDUFB10O96000 172 aa9.69□□□□□ -0.86
TRIM55-204ENST00000353317 CAP2P40123 477 aa9.69□□□□□ -0.86
TRIM55-204ENST00000353317 KARSQ15046 597 aaKnown RBP9.69□□□□□ -0.86
TRIM55-204ENST00000353317 SAFBQ15424 915 aaKnown RBP eCLIP9.69□□□□□ -0.86
TRIM55-204ENST00000353317 C9orf131Q5VYM1 1079 aa9.69□□□□□ -0.86
TRIM55-204ENST00000353317 SPATA20Q8TB22 786 aa9.69□□□□□ -0.86
TRIM55-204ENST00000353317 PARD6BQ9BYG5 372 aa9.69□□□□□ -0.86
TRIM55-204ENST00000353317 BARHL2Q9NY43 387 aa9.69□□□□□ -0.86
TRIM55-204ENST00000353317 SOWAHDA6NJG2 315 aa9.68□□□□□ -0.86
TRIM55-204ENST00000353317 TEX33O43247 280 aa9.68□□□□□ -0.86
TRIM55-204ENST00000353317 ATP8B1O43520 1251 aa9.68□□□□□ -0.86
TRIM55-204ENST00000353317 GNAQP50148 359 aa9.68□□□□□ -0.86
TRIM55-204ENST00000353317 NLRP5P59047 1200 aa9.68□□□□□ -0.86
TRIM55-204ENST00000353317 SLFN13Q68D06 897 aa9.68□□□□□ -0.86
TRIM55-204ENST00000353317 APTXQ7Z2E3 356 aaKnown RBP9.68□□□□□ -0.86
TRIM55-204ENST00000353317 CSRNP2Q9H175 543 aa9.68□□□□□ -0.86
TRIM55-204ENST00000353317 DACH1Q9UI36 760 aa9.68□□□□□ -0.86
TRIM55-204ENST00000353317 SRPRBQ9Y5M8 271 aaKnown RBP9.68□□□□□ -0.86
TRIM55-204ENST00000353317 A0A0U1RQJ8 604 aa9.68□□□□□ -0.86
TRIM55-204ENST00000353317 A0A1B0GTH6 734 aa9.68□□□□□ -0.86
TRIM55-204ENST00000353317 EDIL3O43854 480 aa9.68□□□□□ -0.86
TRIM55-204ENST00000353317 INPP5BP32019 993 aa9.68□□□□□ -0.86
TRIM55-204ENST00000353317 KRT2P35908 639 aa9.68□□□□□ -0.86
TRIM55-204ENST00000353317 ZYXQ15942 572 aaKnown RBP9.68□□□□□ -0.86
TRIM55-204ENST00000353317 TRIML1Q8N9V2 468 aa9.68□□□□□ -0.86
TRIM55-204ENST00000353317 ZNF579Q8NAF0 562 aaKnown RBP9.68□□□□□ -0.86
TRIM55-204ENST00000353317 CCDC12Q8WUD4 166 aaPredicted RBP9.68□□□□□ -0.86
TRIM55-204ENST00000353317 ATRIPQ8WXE1 791 aa9.68□□□□□ -0.86
TRIM55-204ENST00000353317 CCDC34Q96HJ3 373 aa9.68□□□□□ -0.86
TRIM55-204ENST00000353317 PCDHA6Q9UN73 950 aa9.68□□□□□ -0.86
TRIM55-204ENST00000353317 PCDHA8Q9Y5H6 950 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms