RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 ANKRD20A8PQ5CZ79 823 aa8.45□□□□□ -1.06
BRCA1-201ENST00000352993 EARS2Q5JPH6 523 aaKnown RBP8.45□□□□□ -1.06
BRCA1-201ENST00000352993 CACNA2D4Q7Z3S7 1137 aa8.45□□□□□ -1.06
BRCA1-201ENST00000352993 TBC1D1Q86TI0 1168 aaPredicted RBP8.45□□□□□ -1.06
BRCA1-201ENST00000352993 NSMCE1Q8WV22 266 aa8.45□□□□□ -1.06
BRCA1-201ENST00000352993 NUP58Q9BVL2 599 aa8.45□□□□□ -1.06
BRCA1-201ENST00000352993 OSBPL7Q9BZF2 842 aa8.45□□□□□ -1.06
BRCA1-201ENST00000352993 NLRP2Q9NX02 1062 aa8.45□□□□□ -1.06
BRCA1-201ENST00000352993 NOVA2Q9UNW9 492 aaKnown RBP8.45□□□□□ -1.06
BRCA1-201ENST00000352993 FTCDO95954 541 aa8.44□□□□□ -1.06
BRCA1-201ENST00000352993 EIF4A3P38919 411 aaKnown RBP8.44□□□□□ -1.06
BRCA1-201ENST00000352993 MRPL12P52815 198 aaKnown RBP8.44□□□□□ -1.06
BRCA1-201ENST00000352993 TRADDQ15628 312 aa8.44□□□□□ -1.06
BRCA1-201ENST00000352993 QPCTQ16769 361 aa8.44□□□□□ -1.06
BRCA1-201ENST00000352993 PIK3AP1Q6ZUJ8 805 aa8.44□□□□□ -1.06
BRCA1-201ENST00000352993 CAVIN3Q969G5 261 aa8.44□□□□□ -1.06
BRCA1-201ENST00000352993 STAMBPL1Q96FJ0 436 aa8.44□□□□□ -1.06
BRCA1-201ENST00000352993 TANGO6Q9C0B7 1094 aa8.44□□□□□ -1.06
BRCA1-201ENST00000352993 NOD2Q9HC29 1040 aa8.44□□□□□ -1.06
BRCA1-201ENST00000352993 MAP3K15Q6ZN16 1313 aa8.44□□□□□ -1.06
BRCA1-201ENST00000352993 KIF4AO95239 1232 aa8.44□□□□□ -1.06
BRCA1-201ENST00000352993 KIF11P52732 1056 aa8.44□□□□□ -1.06
BRCA1-201ENST00000352993 PMS1P54277 932 aaKnown RBP8.44□□□□□ -1.06
BRCA1-201ENST00000352993 SPRED3Q2MJR0 410 aa8.44□□□□□ -1.06
BRCA1-201ENST00000352993 RRAGAQ7L523 313 aa8.44□□□□□ -1.06
BRCA1-201ENST00000352993 TMC4Q7Z404 712 aa8.44□□□□□ -1.06
BRCA1-201ENST00000352993 CCDC63Q8NA47 563 aa8.44□□□□□ -1.06
BRCA1-201ENST00000352993 FANCBQ8NB91 859 aa8.44□□□□□ -1.06
BRCA1-201ENST00000352993 NOX5Q96PH1 765 aa8.44□□□□□ -1.06
BRCA1-201ENST00000352993 CNNM1Q9NRU3 951 aa8.44□□□□□ -1.06
BRCA1-201ENST00000352993 STK36Q9NRP7 1315 aa8.44□□□□□ -1.06
BRCA1-201ENST00000352993 MAP2K1Q02750 393 aaPredicted RBP8.44□□□□□ -1.06
BRCA1-201ENST00000352993 ARID5AQ03989 594 aa8.44□□□□□ -1.06
BRCA1-201ENST00000352993 FAM133BQ5BKY9 247 aaKnown RBP8.44□□□□□ -1.06
BRCA1-201ENST00000352993 SH3RF1Q7Z6J0 888 aa8.44□□□□□ -1.06
BRCA1-201ENST00000352993 IQCKQ8N0W5 287 aa8.44□□□□□ -1.06
BRCA1-201ENST00000352993 PLBD2Q8NHP8 589 aa8.44□□□□□ -1.06
BRCA1-201ENST00000352993 TAF4BQ92750 862 aa8.44□□□□□ -1.06
BRCA1-201ENST00000352993 CCDC47Q96A33 483 aaKnown RBP8.44□□□□□ -1.06
BRCA1-201ENST00000352993 ZBTB10Q96DT7 871 aa8.44□□□□□ -1.06
BRCA1-201ENST00000352993 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.44□□□□□ -1.06
BRCA1-201ENST00000352993 ATP6V0A4Q9HBG4 840 aa8.44□□□□□ -1.06
BRCA1-201ENST00000352993 CPSF2Q9P2I0 782 aaKnown RBP8.44□□□□□ -1.06
BRCA1-201ENST00000352993 PACSIN2Q9UNF0 486 aaPredicted RBP8.44□□□□□ -1.06
BRCA1-201ENST00000352993 LEMD3Q9Y2U8 911 aa8.44□□□□□ -1.06
BRCA1-201ENST00000352993 L3MBTL1Q9Y468 752 aa8.44□□□□□ -1.06
BRCA1-201ENST00000352993 WDR17Q8IZU2 1322 aa8.44□□□□□ -1.06
BRCA1-201ENST00000352993 LMO7Q8WWI1 1683 aa8.43□□□□□ -1.06
BRCA1-201ENST00000352993 SMIM23A6NLE4 172 aa8.43□□□□□ -1.06
BRCA1-201ENST00000352993 KIF3CO14782 793 aa8.43□□□□□ -1.06
BRCA1-201ENST00000352993 KDM6AO15550 1401 aaPredicted RBP8.43□□□□□ -1.06
BRCA1-201ENST00000352993 MBD4O95243 580 aa8.43□□□□□ -1.06
BRCA1-201ENST00000352993 BMP15O95972 392 aa8.43□□□□□ -1.06
BRCA1-201ENST00000352993 CSB-PGBD3P0DP91 1061 aa8.43□□□□□ -1.06
BRCA1-201ENST00000352993 EEF1GP26641 437 aaKnown RBP8.43□□□□□ -1.06
BRCA1-201ENST00000352993 NLRP5P59047 1200 aa8.43□□□□□ -1.06
BRCA1-201ENST00000352993 TCIRG1Q13488 830 aa8.43□□□□□ -1.06
BRCA1-201ENST00000352993 KRT71Q3SY84 523 aa8.43□□□□□ -1.06
BRCA1-201ENST00000352993 TTLL7Q6ZT98 887 aa8.43□□□□□ -1.06
BRCA1-201ENST00000352993 SGMS1Q86VZ5 419 aa8.43□□□□□ -1.06
BRCA1-201ENST00000352993 FAM228AQ86W67 206 aa8.43□□□□□ -1.06
BRCA1-201ENST00000352993 PROSER2Q86WR7 435 aaPredicted RBP8.43□□□□□ -1.06
BRCA1-201ENST00000352993 ZNF654Q8IZM8 581 aa8.43□□□□□ -1.06
BRCA1-201ENST00000352993 CEP120Q8N960 986 aa8.43□□□□□ -1.06
BRCA1-201ENST00000352993 SAAL1Q96ER3 474 aa8.43□□□□□ -1.06
BRCA1-201ENST00000352993 SELENOSQ9BQE4 189 aa8.43□□□□□ -1.06
BRCA1-201ENST00000352993 KRT23Q9C075 422 aa8.43□□□□□ -1.06
BRCA1-201ENST00000352993 YIPF3Q9GZM5 350 aa8.43□□□□□ -1.06
BRCA1-201ENST00000352993 SH2D4AQ9H788 454 aa8.43□□□□□ -1.06
BRCA1-201ENST00000352993 ARMT1Q9H993 441 aa8.43□□□□□ -1.06
BRCA1-201ENST00000352993 C1orf167Q5SNV9 1468 aa8.43□□□□□ -1.06
BRCA1-201ENST00000352993 A0A1W2PQC6 194 aa8.43□□□□□ -1.06
BRCA1-201ENST00000352993 TLDC2A0PJX2 215 aa8.43□□□□□ -1.06
BRCA1-201ENST00000352993 WNT7AO00755 349 aa8.43□□□□□ -1.06
BRCA1-201ENST00000352993 ADD2P35612 726 aa8.43□□□□□ -1.06
BRCA1-201ENST00000352993 LIFRP42702 1097 aa8.43□□□□□ -1.06
BRCA1-201ENST00000352993 EHHADHQ08426 723 aa8.43□□□□□ -1.06
BRCA1-201ENST00000352993 GLE1Q53GS7 698 aaKnown RBP8.43□□□□□ -1.06
BRCA1-201ENST00000352993 PPP4R3AQ6IN85 833 aa8.43□□□□□ -1.06
BRCA1-201ENST00000352993 ANKS4BQ8N8V4 417 aa8.43□□□□□ -1.06
BRCA1-201ENST00000352993 ZNF526Q8TF50 670 aaPredicted RBP8.43□□□□□ -1.06
BRCA1-201ENST00000352993 CASKIN2Q8WXE0 1202 aa8.43□□□□□ -1.06
BRCA1-201ENST00000352993 CNOT6LQ96LI5 555 aaKnown RBP8.43□□□□□ -1.06
BRCA1-201ENST00000352993 BAZ2BQ9UIF8 2168 aaKnown RBP8.43□□□□□ -1.06
BRCA1-201ENST00000352993 HGSO14964 777 aaPredicted RBP8.43□□□□□ -1.06
BRCA1-201ENST00000352993 TATP17735 454 aaPredicted RBP8.43□□□□□ -1.06
BRCA1-201ENST00000352993 ITGB3BPQ13352 177 aaPredicted RBP8.43□□□□□ -1.06
BRCA1-201ENST00000352993 AKNAD1Q5T1N1 836 aa8.43□□□□□ -1.06
BRCA1-201ENST00000352993 RUFY4Q6ZNE9 571 aa8.43□□□□□ -1.06
BRCA1-201ENST00000352993 IRF2BP1Q8IU81 584 aa8.43□□□□□ -1.06
BRCA1-201ENST00000352993 IFNL3Q8IZI9 196 aa8.43□□□□□ -1.06
BRCA1-201ENST00000352993 CALR3Q96L12 384 aaKnown RBP8.43□□□□□ -1.06
BRCA1-201ENST00000352993 CCDC113Q9H0I3 377 aa8.43□□□□□ -1.06
BRCA1-201ENST00000352993 CNNM2Q9H8M5 875 aa8.43□□□□□ -1.06
BRCA1-201ENST00000352993 MYH13Q9UKX3 1938 aa8.42□□□□□ -1.06
BRCA1-201ENST00000352993 PARP4Q9UKK3 1724 aaKnown RBP8.42□□□□□ -1.06
BRCA1-201ENST00000352993 ZNF263O14978 683 aa8.42□□□□□ -1.06
BRCA1-201ENST00000352993 ATP6V1G2O95670 118 aa8.42□□□□□ -1.06
BRCA1-201ENST00000352993 UBA7P41226 1012 aa8.42□□□□□ -1.06
BRCA1-201ENST00000352993 MCAMP43121 646 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms