RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 RICTORQ6R327 1708 aa15.17■□□□□ 0.02
SMC6-201ENST00000351948 ABCC12Q96J65 1359 aa15.17■□□□□ 0.02
SMC6-201ENST00000351948 PSMD14O00487 310 aa15.16■□□□□ 0.02
SMC6-201ENST00000351948 CASP1P29466 404 aa15.16■□□□□ 0.02
SMC6-201ENST00000351948 PPM1FP49593 454 aaPredicted RBP15.16■□□□□ 0.02
SMC6-201ENST00000351948 CKAP4Q07065 602 aaKnown RBP15.16■□□□□ 0.02
SMC6-201ENST00000351948 TXNRD3Q86VQ6 643 aa15.16■□□□□ 0.02
SMC6-201ENST00000351948 SESTD1Q86VW0 696 aa15.16■□□□□ 0.02
SMC6-201ENST00000351948 ARMCX3Q9UH62 379 aaPredicted RBP15.16■□□□□ 0.02
SMC6-201ENST00000351948 C12orf60Q5U649 245 aa15.16■□□□□ 0.02
SMC6-201ENST00000351948 C3orf67Q6ZVT6 689 aa15.16■□□□□ 0.02
SMC6-201ENST00000351948 PLCD3Q8N3E9 789 aa15.16■□□□□ 0.02
SMC6-201ENST00000351948 KIFAP3Q92845 792 aa15.16■□□□□ 0.02
SMC6-201ENST00000351948 RPAP1Q9BWH6 1393 aaPredicted RBP15.16■□□□□ 0.02
SMC6-201ENST00000351948 A0A1W2PQ27 194 aa15.16■□□□□ 0.02
SMC6-201ENST00000351948 A0A1W2PQ64 194 aa15.16■□□□□ 0.02
SMC6-201ENST00000351948 A0A1W2PQD8 194 aa15.16■□□□□ 0.02
SMC6-201ENST00000351948 TTBK2Q6IQ55 1244 aa15.16■□□□□ 0.02
SMC6-201ENST00000351948 ARMCX5Q6P1M9 558 aa15.16■□□□□ 0.02
SMC6-201ENST00000351948 CYP26C1Q6V0L0 522 aa15.16■□□□□ 0.02
SMC6-201ENST00000351948 DESI2Q9BSY9 194 aa15.16■□□□□ 0.02
SMC6-201ENST00000351948 RCOR1Q9UKL0 485 aa15.16■□□□□ 0.02
SMC6-201ENST00000351948 PPP6R2O75170 966 aa15.16■□□□□ 0.02
SMC6-201ENST00000351948 MCM3P25205 808 aa15.16■□□□□ 0.02
SMC6-201ENST00000351948 GUCY1A2P33402 732 aa15.16■□□□□ 0.02
SMC6-201ENST00000351948 DMP1Q13316 513 aaPredicted RBP15.16■□□□□ 0.02
SMC6-201ENST00000351948 SLC9C1Q4G0N8 1177 aa15.16■□□□□ 0.02
SMC6-201ENST00000351948 SAMD7Q7Z3H4 446 aa15.16■□□□□ 0.02
SMC6-201ENST00000351948 IFT81Q8WYA0 676 aa15.16■□□□□ 0.02
SMC6-201ENST00000351948 CEP170P1Q96L14 293 aa15.16■□□□□ 0.02
SMC6-201ENST00000351948 USTQ9Y2C2 406 aa15.16■□□□□ 0.02
SMC6-201ENST00000351948 FLT1P17948 1338 aa15.16■□□□□ 0.02
SMC6-201ENST00000351948 ZBTB5O15062 677 aa15.15■□□□□ 0.02
SMC6-201ENST00000351948 PLCG1P19174 1290 aa15.15■□□□□ 0.02
SMC6-201ENST00000351948 STRIP1Q5VSL9 837 aa15.15■□□□□ 0.02
SMC6-201ENST00000351948 SPECC1LQ69YQ0 1117 aa15.15■□□□□ 0.02
SMC6-201ENST00000351948 RNF207Q6ZRF8 634 aa15.15■□□□□ 0.02
SMC6-201ENST00000351948 POTEMA6NI47 508 aa15.15■□□□□ 0.02
SMC6-201ENST00000351948 MTERF2Q49AM1 385 aa15.15■□□□□ 0.02
SMC6-201ENST00000351948 SNRNP48Q6IEG0 339 aaKnown RBP15.15■□□□□ 0.02
SMC6-201ENST00000351948 C11orf57Q6ZUT1 292 aaPredicted RBP15.15■□□□□ 0.02
SMC6-201ENST00000351948 ZBTB8OSQ8IWT0 167 aa15.15■□□□□ 0.02
SMC6-201ENST00000351948 MYO1AQ9UBC5 1043 aa15.15■□□□□ 0.02
SMC6-201ENST00000351948 SFI1A8K8P3 1242 aa15.15■□□□□ 0.02
SMC6-201ENST00000351948 HNRNPDLO14979 420 aaKnown RBP15.15■□□□□ 0.02
SMC6-201ENST00000351948 CLIC2O15247 247 aa15.15■□□□□ 0.02
SMC6-201ENST00000351948 MAGEA1P43355 309 aa15.15■□□□□ 0.02
SMC6-201ENST00000351948 GOLGA8FQ08AF8 430 aa15.15■□□□□ 0.02
SMC6-201ENST00000351948 GOLGA8DPQ0D2H9 430 aa15.15■□□□□ 0.02
SMC6-201ENST00000351948 CDC42EP5Q6NZY7 148 aa15.15■□□□□ 0.02
SMC6-201ENST00000351948 FAM160B2Q86V87 743 aa15.15■□□□□ 0.02
SMC6-201ENST00000351948 ADD3Q9UEY8 706 aaKnown RBP15.15■□□□□ 0.02
SMC6-201ENST00000351948 COL5A2P05997 1499 aaPredicted RBP15.15■□□□□ 0.02
SMC6-201ENST00000351948 USP32Q8NFA0 1604 aa15.15■□□□□ 0.02
SMC6-201ENST00000351948 INO80B-WBP1J3KQ70 363 aa15.14■□□□□ 0.01
SMC6-201ENST00000351948 HMGCS2P54868 508 aa15.14■□□□□ 0.01
SMC6-201ENST00000351948 POMGNT1Q8WZA1 660 aa15.14■□□□□ 0.01
SMC6-201ENST00000351948 INO80BQ9C086 356 aaPredicted RBP15.14■□□□□ 0.01
SMC6-201ENST00000351948 ST7Q9NRC1 585 aa15.14■□□□□ 0.01
SMC6-201ENST00000351948 CTTNBP2NLQ9P2B4 639 aa15.14■□□□□ 0.01
SMC6-201ENST00000351948 ARHGEF28Q8N1W1 1705 aaKnown RBP15.14■□□□□ 0.01
SMC6-201ENST00000351948 PRPF6O94906 941 aaKnown RBP15.14■□□□□ 0.01
SMC6-201ENST00000351948 ABCB4P21439 1286 aa15.14■□□□□ 0.01
SMC6-201ENST00000351948 ALX1Q15699 326 aa15.14■□□□□ 0.01
SMC6-201ENST00000351948 MSANTD4Q8NCY6 345 aa15.14■□□□□ 0.01
SMC6-201ENST00000351948 PIGOQ8TEQ8 1089 aa15.14■□□□□ 0.01
SMC6-201ENST00000351948 JAKMIP2Q96AA8 810 aa15.14■□□□□ 0.01
SMC6-201ENST00000351948 PCIF1Q9H4Z3 704 aa15.14■□□□□ 0.01
SMC6-201ENST00000351948 SENP2Q9HC62 589 aa15.14■□□□□ 0.01
SMC6-201ENST00000351948 EPB41L4AQ9HCS5 686 aaPredicted RBP15.14■□□□□ 0.01
SMC6-201ENST00000351948 CCDC25Q86WR0 208 aa15.14■□□□□ 0.01
SMC6-201ENST00000351948 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.14■□□□□ 0.01
SMC6-201ENST00000351948 NRBP2Q9NSY0 501 aa15.14■□□□□ 0.01
SMC6-201ENST00000351948 CGNQ9P2M7 1197 aaKnown RBP15.14■□□□□ 0.01
SMC6-201ENST00000351948 AKT3Q9Y243 479 aa15.14■□□□□ 0.01
SMC6-201ENST00000351948 SLU7O95391 586 aaKnown RBP15.14■□□□□ 0.01
SMC6-201ENST00000351948 QRICH1Q2TAL8 776 aa15.14■□□□□ 0.01
SMC6-201ENST00000351948 SLC7A3Q8WY07 619 aa15.14■□□□□ 0.01
SMC6-201ENST00000351948 RMDN3Q96TC7 470 aa15.14■□□□□ 0.01
SMC6-201ENST00000351948 FERMT1Q9BQL6 677 aa15.14■□□□□ 0.01
SMC6-201ENST00000351948 OSBPL5Q9H0X9 879 aaPredicted RBP15.14■□□□□ 0.01
SMC6-201ENST00000351948 POLLQ9UGP5 575 aa15.14■□□□□ 0.01
SMC6-201ENST00000351948 PNPLA7Q6ZV29 1317 aa15.14■□□□□ 0.01
SMC6-201ENST00000351948 PRPHP41219 470 aa15.13■□□□□ 0.01
SMC6-201ENST00000351948 PFKFB3Q16875 520 aaPredicted RBP15.13■□□□□ 0.01
SMC6-201ENST00000351948 SPOUT1Q5T280 376 aaKnown RBP15.13■□□□□ 0.01
SMC6-201ENST00000351948 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.13■□□□□ 0.01
SMC6-201ENST00000351948 FBXO33Q7Z6M2 555 aa15.13■□□□□ 0.01
SMC6-201ENST00000351948 ADGRF4Q8IZF3 695 aa15.13■□□□□ 0.01
SMC6-201ENST00000351948 CCDC114Q96M63 670 aa15.13■□□□□ 0.01
SMC6-201ENST00000351948 FAM107BQ9H098 131 aa15.13■□□□□ 0.01
SMC6-201ENST00000351948 PRDM10Q9NQV6 1147 aa15.13■□□□□ 0.01
SMC6-201ENST00000351948 CWC15Q9P013 229 aaKnown RBP15.13■□□□□ 0.01
SMC6-201ENST00000351948 COMMD10Q9Y6G5 202 aa15.13■□□□□ 0.01
SMC6-201ENST00000351948 TRIM14Q14142 442 aa15.13■□□□□ 0.01
SMC6-201ENST00000351948 C2orf69Q8N8R5 385 aa15.13■□□□□ 0.01
SMC6-201ENST00000351948 ATP6V0A1Q93050 837 aa15.13■□□□□ 0.01
SMC6-201ENST00000351948 PLEKHA4Q9H4M7 779 aa15.13■□□□□ 0.01
SMC6-201ENST00000351948 PCDHA6Q9UN73 950 aa15.13■□□□□ 0.01
SMC6-201ENST00000351948 PCDHA8Q9Y5H6 950 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms