RNA–Protein interactions for RNA: ENST00000351691.9

TRAF3-202, Transcript of TNF receptor associated factor 3, humanhuman

TSL 1 (best) BASIC

Gene TRAF3, Length 2,239 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-202ENST00000351691 CABP5Q9NP86 173 aa16.6■□□□□ 0.25
TRAF3-202ENST00000351691 GDF3Q9NR23 364 aa16.6■□□□□ 0.25
TRAF3-202ENST00000351691 THRAP3Q9Y2W1 955 aaKnown RBP16.6■□□□□ 0.25
TRAF3-202ENST00000351691 A0A0G2JS52 829 aa16.59■□□□□ 0.25
TRAF3-202ENST00000351691 UBE2Q2LH0YL09 131 aa16.59■□□□□ 0.25
TRAF3-202ENST00000351691 CAMTA2O94983 1202 aa16.59■□□□□ 0.25
TRAF3-202ENST00000351691 SRGNP10124 158 aa16.59■□□□□ 0.25
TRAF3-202ENST00000351691 CASP1P29466 404 aa16.59■□□□□ 0.25
TRAF3-202ENST00000351691 EZH2Q15910 746 aaKnown RBP16.59■□□□□ 0.25
TRAF3-202ENST00000351691 FIGNQ5HY92 759 aa16.59■□□□□ 0.25
TRAF3-202ENST00000351691 TLDC1Q6P9B6 456 aa16.59■□□□□ 0.25
TRAF3-202ENST00000351691 CCDC121Q6ZUS5 278 aa16.59■□□□□ 0.25
TRAF3-202ENST00000351691 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.59■□□□□ 0.25
TRAF3-202ENST00000351691 SGSM3Q96HU1 749 aa16.59■□□□□ 0.25
TRAF3-202ENST00000351691 RBM28Q9NW13 759 aaKnown RBP16.59■□□□□ 0.25
TRAF3-202ENST00000351691 MYH6P13533 1939 aa16.59■□□□□ 0.25
TRAF3-202ENST00000351691 A0A1W2PQJ5 194 aa16.58■□□□□ 0.25
TRAF3-202ENST00000351691 ERICH2A1L162 156 aa16.58■□□□□ 0.25
TRAF3-202ENST00000351691 PAFAH1B1P43034 410 aa16.58■□□□□ 0.25
TRAF3-202ENST00000351691 IRX1P78414 480 aaPredicted RBP16.58■□□□□ 0.25
TRAF3-202ENST00000351691 CTDSPL2Q05D32 466 aa16.58■□□□□ 0.25
TRAF3-202ENST00000351691 PAK2Q13177 524 aa16.58■□□□□ 0.25
TRAF3-202ENST00000351691 DDB1Q16531 1140 aa16.58■□□□□ 0.25
TRAF3-202ENST00000351691 FAM98CQ17RN3 349 aaKnown RBP16.58■□□□□ 0.25
TRAF3-202ENST00000351691 LACTB2Q53H82 288 aaPredicted RBP16.58■□□□□ 0.25
TRAF3-202ENST00000351691 PDXDC2PQ6P474 469 aa16.58■□□□□ 0.25
TRAF3-202ENST00000351691 ATP6V1G3Q96LB4 118 aa16.58■□□□□ 0.25
TRAF3-202ENST00000351691 OSBPL9Q96SU4 736 aa16.58■□□□□ 0.25
TRAF3-202ENST00000351691 SLC4A4Q9Y6R1 1079 aa16.58■□□□□ 0.25
TRAF3-202ENST00000351691 ZNF233A6NK53 670 aa16.58■□□□□ 0.24
TRAF3-202ENST00000351691 ATP1A2P50993 1020 aa16.58■□□□□ 0.24
TRAF3-202ENST00000351691 WTAPQ15007 396 aa16.58■□□□□ 0.24
TRAF3-202ENST00000351691 C11orf91Q3C1V1 193 aa16.58■□□□□ 0.24
TRAF3-202ENST00000351691 MYL10Q9BUA6 226 aa16.58■□□□□ 0.24
TRAF3-202ENST00000351691 ANAPC4Q9UJX5 808 aa16.58■□□□□ 0.24
TRAF3-202ENST00000351691 SPATA31A6Q5VVP1 1343 aa16.58■□□□□ 0.24
TRAF3-202ENST00000351691 NTSR2O95665 410 aa16.57■□□□□ 0.24
TRAF3-202ENST00000351691 XBP1P17861 261 aa16.57■□□□□ 0.24
TRAF3-202ENST00000351691 CRKLP46109 303 aaKnown RBP16.57■□□□□ 0.24
TRAF3-202ENST00000351691 SLC8A3P57103 927 aa16.57■□□□□ 0.24
TRAF3-202ENST00000351691 C8orf74Q6P047 294 aa16.57■□□□□ 0.24
TRAF3-202ENST00000351691 CYB5D1Q6P9G0 228 aa16.57■□□□□ 0.24
TRAF3-202ENST00000351691 FUKQ8N0W3 1084 aa16.57■□□□□ 0.24
TRAF3-202ENST00000351691 SH2D3CQ8N5H7 860 aa16.57■□□□□ 0.24
TRAF3-202ENST00000351691 EIF1ADQ8N9N8 165 aaKnown RBP16.57■□□□□ 0.24
TRAF3-202ENST00000351691 OXER1Q8TDS5 423 aa16.57■□□□□ 0.24
TRAF3-202ENST00000351691 CCDC114Q96M63 670 aa16.57■□□□□ 0.24
TRAF3-202ENST00000351691 SH2D4AQ9H788 454 aa16.57■□□□□ 0.24
TRAF3-202ENST00000351691 DDX20Q9UHI6 824 aaKnown RBP16.57■□□□□ 0.24
TRAF3-202ENST00000351691 TSKSQ9UJT2 592 aa16.57■□□□□ 0.24
TRAF3-202ENST00000351691 TFR2Q9UP52 801 aa16.57■□□□□ 0.24
TRAF3-202ENST00000351691 RTN2O75298 545 aa16.57■□□□□ 0.24
TRAF3-202ENST00000351691 HNRNPH3P31942 346 aaKnown RBP16.57■□□□□ 0.24
TRAF3-202ENST00000351691 HDLBPQ00341 1268 aaKnown RBP16.57■□□□□ 0.24
TRAF3-202ENST00000351691 GUCY1A3Q02108 690 aa16.57■□□□□ 0.24
TRAF3-202ENST00000351691 IFT88Q13099 833 aa16.57■□□□□ 0.24
TRAF3-202ENST00000351691 ITGB3BPQ13352 177 aaPredicted RBP16.57■□□□□ 0.24
TRAF3-202ENST00000351691 SPA17Q15506 151 aa16.57■□□□□ 0.24
TRAF3-202ENST00000351691 LRIG3Q6UXM1 1119 aa16.57■□□□□ 0.24
TRAF3-202ENST00000351691 ARMC9Q7Z3E5 817 aa16.57■□□□□ 0.24
TRAF3-202ENST00000351691 ADSSL1Q8N142 457 aa16.57■□□□□ 0.24
TRAF3-202ENST00000351691 WHAMMQ8TF30 809 aa16.57■□□□□ 0.24
TRAF3-202ENST00000351691 RNF26Q9BY78 433 aaPredicted RBP16.57■□□□□ 0.24
TRAF3-202ENST00000351691 LCA5LO95447 670 aa16.56■□□□□ 0.24
TRAF3-202ENST00000351691 RPN1P04843 607 aaKnown RBP16.56■□□□□ 0.24
TRAF3-202ENST00000351691 NBPF9Q3BBW0 867 aa16.56■□□□□ 0.24
TRAF3-202ENST00000351691 MEX3CQ5U5Q3 659 aaKnown RBP16.56■□□□□ 0.24
TRAF3-202ENST00000351691 LCORLQ8N3X6 602 aa16.56■□□□□ 0.24
TRAF3-202ENST00000351691 PIK3R5Q8WYR1 880 aa16.56■□□□□ 0.24
TRAF3-202ENST00000351691 FAM212AQ96EL1 285 aa16.56■□□□□ 0.24
TRAF3-202ENST00000351691 CYFIP2Q96F07 1278 aa16.56■□□□□ 0.24
TRAF3-202ENST00000351691 ACSBG1Q96GR2 724 aa16.56■□□□□ 0.24
TRAF3-202ENST00000351691 CCDC43Q96MW1 224 aaKnown RBP16.56■□□□□ 0.24
TRAF3-202ENST00000351691 ALS2CR12Q96Q35 445 aa16.56■□□□□ 0.24
TRAF3-202ENST00000351691 TACC3Q9Y6A5 838 aa16.56■□□□□ 0.24
TRAF3-202ENST00000351691 KRT2P35908 639 aa16.55■□□□□ 0.24
TRAF3-202ENST00000351691 ATP2C1P98194 919 aaPredicted RBP16.55■□□□□ 0.24
TRAF3-202ENST00000351691 XRCC4Q13426 336 aa16.55■□□□□ 0.24
TRAF3-202ENST00000351691 CCDC181Q5TID7 509 aa16.55■□□□□ 0.24
TRAF3-202ENST00000351691 EXOC1Q9NV70 894 aa16.55■□□□□ 0.24
TRAF3-202ENST00000351691 VPS54Q9P1Q0 977 aa16.55■□□□□ 0.24
TRAF3-202ENST00000351691 MAGEC2Q9UBF1 373 aaPredicted RBP16.55■□□□□ 0.24
TRAF3-202ENST00000351691 USP21Q9UK80 565 aa16.55■□□□□ 0.24
TRAF3-202ENST00000351691 ZNF652Q9Y2D9 606 aa16.55■□□□□ 0.24
TRAF3-202ENST00000351691 MYH2Q9UKX2 1941 aa16.55■□□□□ 0.24
TRAF3-202ENST00000351691 C5orf60A6NFR6 353 aa16.55■□□□□ 0.24
TRAF3-202ENST00000351691 RGL2O15211 777 aa16.55■□□□□ 0.24
TRAF3-202ENST00000351691 KRT14P02533 472 aa16.55■□□□□ 0.24
TRAF3-202ENST00000351691 GHRP10912 638 aa16.55■□□□□ 0.24
TRAF3-202ENST00000351691 PRCPP42785 496 aa16.55■□□□□ 0.24
TRAF3-202ENST00000351691 BCAMP50895 628 aa16.55■□□□□ 0.24
TRAF3-202ENST00000351691 SLC7A5Q01650 507 aa16.55■□□□□ 0.24
TRAF3-202ENST00000351691 MAB21L3Q8N8X9 362 aa16.55■□□□□ 0.24
TRAF3-202ENST00000351691 MARCH10Q8NA82 808 aaPredicted RBP16.55■□□□□ 0.24
TRAF3-202ENST00000351691 PHF20Q9BVI0 1012 aa16.55■□□□□ 0.24
TRAF3-202ENST00000351691 LRP2BPQ9P2M1 347 aa16.55■□□□□ 0.24
TRAF3-202ENST00000351691 TAOK2Q9UL54 1235 aa16.55■□□□□ 0.24
TRAF3-202ENST00000351691 ZNF804BA4D1E1 1349 aa16.55■□□□□ 0.24
TRAF3-202ENST00000351691 MACROD2A1Z1Q3 448 aa16.54■□□□□ 0.24
TRAF3-202ENST00000351691 PCP11498 1178 aaKnown RBP16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms