RNA–Protein interactions for RNA: ENST00000349038.8

PTBP1-201, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTBP1, Length 3,155 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-201ENST00000349038 MIGA1Q8NAN2 632 aa16.79■□□□□ 0.28
PTBP1-201ENST00000349038 CCDC51Q96ER9 411 aa16.79■□□□□ 0.28
PTBP1-201ENST00000349038 ALS2Q96Q42 1657 aa16.79■□□□□ 0.28
PTBP1-201ENST00000349038 PARP4Q9UKK3 1724 aaKnown RBP16.79■□□□□ 0.28
PTBP1-201ENST00000349038 V9GY48 417 aaPredicted RBP16.79■□□□□ 0.28
PTBP1-201ENST00000349038 NKRFO15226 690 aaKnown RBP eCLIP16.79■□□□□ 0.282e-8■□□□□ 10.2
PTBP1-201ENST00000349038 TOM1O60784 492 aa16.79■□□□□ 0.28
PTBP1-201ENST00000349038 CREG2Q8IUH2 290 aa16.79■□□□□ 0.28
PTBP1-201ENST00000349038 CACNA2D3Q8IZS8 1091 aa16.79■□□□□ 0.28
PTBP1-201ENST00000349038 EHBP1Q8NDI1 1231 aa16.79■□□□□ 0.28
PTBP1-201ENST00000349038 SPATA20Q8TB22 786 aa16.79■□□□□ 0.28
PTBP1-201ENST00000349038 CTNNA1P35221 906 aaKnown RBP16.79■□□□□ 0.28
PTBP1-201ENST00000349038 IFFO1Q0D2I5 559 aa16.79■□□□□ 0.28
PTBP1-201ENST00000349038 MARCH10Q8NA82 808 aaPredicted RBP16.79■□□□□ 0.28
PTBP1-201ENST00000349038 KANSL2Q9H9L4 492 aa16.79■□□□□ 0.28
PTBP1-201ENST00000349038 MPHOSPH10O00566 681 aaKnown RBP16.78■□□□□ 0.28
PTBP1-201ENST00000349038 DIAPH2O60879 1101 aa16.78■□□□□ 0.28
PTBP1-201ENST00000349038 PBX1P40424 430 aa16.78■□□□□ 0.28
PTBP1-201ENST00000349038 MAP2K1Q02750 393 aaPredicted RBP16.78■□□□□ 0.28
PTBP1-201ENST00000349038 EHHADHQ08426 723 aa16.78■□□□□ 0.28
PTBP1-201ENST00000349038 MEX3CQ5U5Q3 659 aaKnown RBP16.78■□□□□ 0.28
PTBP1-201ENST00000349038 CDKAL1Q5VV42 579 aa16.78■□□□□ 0.28
PTBP1-201ENST00000349038 MSL3Q8N5Y2 521 aaKnown RBP16.78■□□□□ 0.28
PTBP1-201ENST00000349038 MB21D1Q8N884 522 aa16.78■□□□□ 0.28
PTBP1-201ENST00000349038 HVCN1Q96D96 273 aa16.78■□□□□ 0.28
PTBP1-201ENST00000349038 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.78■□□□□ 0.285e-9■□□□□ 10.2
PTBP1-201ENST00000349038 SMIM22K7EJ46 135 aa16.78■□□□□ 0.28
PTBP1-201ENST00000349038 FMNL1O95466 1100 aaPredicted RBP16.78■□□□□ 0.28
PTBP1-201ENST00000349038 MCAMP43121 646 aa16.78■□□□□ 0.28
PTBP1-201ENST00000349038 HAUS3Q68CZ6 603 aa16.78■□□□□ 0.28
PTBP1-201ENST00000349038 PIK3AP1Q6ZUJ8 805 aa16.78■□□□□ 0.28
PTBP1-201ENST00000349038 CCDC170Q8IYT3 715 aa16.78■□□□□ 0.28
PTBP1-201ENST00000349038 KIF2BQ8N4N8 673 aa16.78■□□□□ 0.28
PTBP1-201ENST00000349038 CSGALNACT2Q8N6G5 542 aa16.78■□□□□ 0.28
PTBP1-201ENST00000349038 SPDYE1Q8NFV5 336 aaPredicted RBP16.78■□□□□ 0.28
PTBP1-201ENST00000349038 ISCA1Q9BUE6 129 aa16.78■□□□□ 0.28
PTBP1-201ENST00000349038 SPATS2LQ9NUQ6 558 aaKnown RBP16.78■□□□□ 0.28
PTBP1-201ENST00000349038 SNX12Q9UMY4 172 aa16.78■□□□□ 0.28
PTBP1-201ENST00000349038 SRPRBQ9Y5M8 271 aaKnown RBP16.78■□□□□ 0.28
PTBP1-201ENST00000349038 RIC1Q4ADV7 1423 aa16.78■□□□□ 0.28
PTBP1-201ENST00000349038 DCDC2CA8MYV0 355 aa16.77■□□□□ 0.28
PTBP1-201ENST00000349038 PRKAB2O43741 272 aa16.77■□□□□ 0.28
PTBP1-201ENST00000349038 ZNF579Q8NAF0 562 aaKnown RBP16.77■□□□□ 0.28
PTBP1-201ENST00000349038 PRCCQ92733 491 aaPredicted RBP16.77■□□□□ 0.28
PTBP1-201ENST00000349038 UIMC1Q96RL1 719 aa16.77■□□□□ 0.28
PTBP1-201ENST00000349038 AP1M1Q9BXS5 423 aa16.77■□□□□ 0.28
PTBP1-201ENST00000349038 LRP6O75581 1613 aa16.77■□□□□ 0.28
PTBP1-201ENST00000349038 NID2Q14112 1375 aa16.77■□□□□ 0.28
PTBP1-201ENST00000349038 TARSL2A2RTX5 802 aaKnown RBP16.77■□□□□ 0.28
PTBP1-201ENST00000349038 NUTM2BA6NNL0 878 aaPredicted RBP16.77■□□□□ 0.28
PTBP1-201ENST00000349038 NUTM2EB1AL46 878 aaPredicted RBP16.77■□□□□ 0.28
PTBP1-201ENST00000349038 PAPD7Q5XG87 772 aaKnown RBP16.77■□□□□ 0.28
PTBP1-201ENST00000349038 RRAGAQ7L523 313 aa16.77■□□□□ 0.28
PTBP1-201ENST00000349038 CEP131Q9UPN4 1083 aa16.77■□□□□ 0.28
PTBP1-201ENST00000349038 GCOM1H8Y6P7 765 aaPredicted RBP16.77■□□□□ 0.27
PTBP1-201ENST00000349038 MYZAPP0CAP1 466 aa16.77■□□□□ 0.27
PTBP1-201ENST00000349038 MAGEA1P43355 309 aa16.77■□□□□ 0.27
PTBP1-201ENST00000349038 SCTRP47872 440 aa16.77■□□□□ 0.27
PTBP1-201ENST00000349038 IFT20Q8IY31 132 aa16.77■□□□□ 0.27
PTBP1-201ENST00000349038 MGARPQ8TDB4 240 aa16.77■□□□□ 0.27
PTBP1-201ENST00000349038 NOC4LQ9BVI4 516 aaKnown RBP16.77■□□□□ 0.27
PTBP1-201ENST00000349038 DPH5Q9H2P9 285 aa16.77■□□□□ 0.27
PTBP1-201ENST00000349038 ARMT1Q9H993 441 aa16.77■□□□□ 0.27
PTBP1-201ENST00000349038 VIMP08670 466 aaKnown RBP16.76■□□□□ 0.27
PTBP1-201ENST00000349038 STAT6P42226 847 aa16.76■□□□□ 0.27
PTBP1-201ENST00000349038 GFPT1Q06210 699 aaPredicted RBP16.76■□□□□ 0.27
PTBP1-201ENST00000349038 TCIRG1Q13488 830 aa16.76■□□□□ 0.27
PTBP1-201ENST00000349038 WTAPQ15007 396 aa16.76■□□□□ 0.27
PTBP1-201ENST00000349038 KRT71Q3SY84 523 aa16.76■□□□□ 0.27
PTBP1-201ENST00000349038 ARMC2Q8NEN0 867 aa16.76■□□□□ 0.27
PTBP1-201ENST00000349038 ALS2CR12Q96Q35 445 aa16.76■□□□□ 0.27
PTBP1-201ENST00000349038 NOD2Q9HC29 1040 aa16.76■□□□□ 0.27
PTBP1-201ENST00000349038 THRAP3Q9Y2W1 955 aaKnown RBP16.76■□□□□ 0.27
PTBP1-201ENST00000349038 UBR2Q8IWV8 1755 aa16.76■□□□□ 0.27
PTBP1-201ENST00000349038 GMNCA6NCL1 334 aa16.76■□□□□ 0.27
PTBP1-201ENST00000349038 TMCO5BA8MYB1 307 aa16.76■□□□□ 0.27
PTBP1-201ENST00000349038 UBAP1LF5GYI3 381 aa16.76■□□□□ 0.27
PTBP1-201ENST00000349038 EIF4A3P38919 411 aaKnown RBP16.76■□□□□ 0.27
PTBP1-201ENST00000349038 LIFRP42702 1097 aa16.76■□□□□ 0.27
PTBP1-201ENST00000349038 RASGRP4Q8TDF6 673 aa16.76■□□□□ 0.27
PTBP1-201ENST00000349038 SEC16BQ96JE7 1060 aa16.76■□□□□ 0.27
PTBP1-201ENST00000349038 TUBGCP2Q9BSJ2 902 aa16.76■□□□□ 0.27
PTBP1-201ENST00000349038 MLXIPLQ9NP71 852 aa16.76■□□□□ 0.27
PTBP1-201ENST00000349038 STRN4Q9NRL3 753 aa16.76■□□□□ 0.27
PTBP1-201ENST00000349038 LEMD3Q9Y2U8 911 aa16.76■□□□□ 0.27
PTBP1-201ENST00000349038 AKAP11Q9UKA4 1901 aa16.76■□□□□ 0.27
PTBP1-201ENST00000349038 RASSF9O75901 435 aa16.75■□□□□ 0.27
PTBP1-201ENST00000349038 FAM107AO95990 144 aa16.75■□□□□ 0.27
PTBP1-201ENST00000349038 IFNAR1P17181 557 aa16.75■□□□□ 0.27
PTBP1-201ENST00000349038 UBE3CQ15386 1083 aa16.75■□□□□ 0.27
PTBP1-201ENST00000349038 CACNA2D4Q7Z3S7 1137 aa16.75■□□□□ 0.27
PTBP1-201ENST00000349038 SYNE4Q8N205 404 aa16.75■□□□□ 0.27
PTBP1-201ENST00000349038 ZNF512BQ96KM6 892 aaPredicted RBP16.75■□□□□ 0.27
PTBP1-201ENST00000349038 KCPQ6ZWJ8 1503 aa16.75■□□□□ 0.27
PTBP1-201ENST00000349038 CAND2O75155 1236 aa16.75■□□□□ 0.27
PTBP1-201ENST00000349038 MAGOHP61326 146 aaKnown RBP16.75■□□□□ 0.27
PTBP1-201ENST00000349038 ADCY1Q08828 1119 aa16.75■□□□□ 0.27
PTBP1-201ENST00000349038 METTL24Q5JXM2 366 aa16.75■□□□□ 0.27
PTBP1-201ENST00000349038 CCDC155Q8N6L0 562 aa16.75■□□□□ 0.27
PTBP1-201ENST00000349038 LMBR1Q8WVP7 490 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms