RNA–Protein interactions for RNA: ENST00000346569.6

ECM1-201, Transcript of extracellular matrix protein 1, humanhuman

TSL 1 (best) BASIC

Gene ECM1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-201ENST00000346569 CNKSR2Q8WXI2 1034 aa12.49□□□□□ -0.41
ECM1-201ENST00000346569 CLMNQ96JQ2 1002 aa12.49□□□□□ -0.41
ECM1-201ENST00000346569 AGBL1Q96MI9 1066 aa12.49□□□□□ -0.41
ECM1-201ENST00000346569 KCNH4Q9UQ05 1017 aa12.49□□□□□ -0.41
ECM1-201ENST00000346569 CLEC11AQ9Y240 323 aa12.49□□□□□ -0.41
ECM1-201ENST00000346569 SMCHD1A6NHR9 2005 aa12.49□□□□□ -0.41
ECM1-201ENST00000346569 SPDYE5A6NIY4 337 aa12.48□□□□□ -0.41
ECM1-201ENST00000346569 VWA5AO00534 786 aa12.48□□□□□ -0.41
ECM1-201ENST00000346569 CTAGE5O15320 804 aa12.48□□□□□ -0.41
ECM1-201ENST00000346569 CCNT1O60563 726 aaKnown RBP12.48□□□□□ -0.41
ECM1-201ENST00000346569 ZBED4O75132 1171 aa12.48□□□□□ -0.41
ECM1-201ENST00000346569 SYKP43405 635 aa12.48□□□□□ -0.41
ECM1-201ENST00000346569 GHRHRQ02643 423 aa12.48□□□□□ -0.41
ECM1-201ENST00000346569 FMR1Q06787 632 aaKnown RBP eCLIP12.48□□□□□ -0.41
ECM1-201ENST00000346569 CAMK4Q16566 473 aa12.48□□□□□ -0.41
ECM1-201ENST00000346569 CLEC4DQ8WXI8 215 aa12.48□□□□□ -0.41
ECM1-201ENST00000346569 MBOAT7Q96N66 472 aa12.48□□□□□ -0.41
ECM1-201ENST00000346569 MTMR9Q96QG7 549 aa12.48□□□□□ -0.41
ECM1-201ENST00000346569 ANO3Q9BYT9 981 aa12.48□□□□□ -0.41
ECM1-201ENST00000346569 TANGO6Q9C0B7 1094 aa12.48□□□□□ -0.41
ECM1-201ENST00000346569 TNMDQ9H2S6 317 aa12.48□□□□□ -0.41
ECM1-201ENST00000346569 ELP3Q9H9T3 547 aa12.48□□□□□ -0.41
ECM1-201ENST00000346569 TMOD4Q9NZQ9 345 aa12.48□□□□□ -0.41
ECM1-201ENST00000346569 KCNH3Q9ULD8 1083 aa12.48□□□□□ -0.41
ECM1-201ENST00000346569 PAPPA2Q9BXP8 1791 aa12.48□□□□□ -0.41
ECM1-201ENST00000346569 MYPNQ86TC9 1320 aa12.48□□□□□ -0.41
ECM1-201ENST00000346569 A0A0G2JLL6 359 aaPredicted RBP12.47□□□□□ -0.41
ECM1-201ENST00000346569 TRAF5O00463 557 aa12.47□□□□□ -0.41
ECM1-201ENST00000346569 IRF6O14896 467 aa12.47□□□□□ -0.41
ECM1-201ENST00000346569 ATP2A1O14983 1001 aa12.47□□□□□ -0.41
ECM1-201ENST00000346569 KINO60870 393 aaKnown RBP12.47□□□□□ -0.41
ECM1-201ENST00000346569 CYP3A4P08684 503 aa12.47□□□□□ -0.41
ECM1-201ENST00000346569 HOXA7P31268 230 aaPredicted RBP12.47□□□□□ -0.41
ECM1-201ENST00000346569 LONP1P36776 959 aaKnown RBP12.47□□□□□ -0.41
ECM1-201ENST00000346569 FSTL1Q12841 308 aa12.47□□□□□ -0.41
ECM1-201ENST00000346569 MOXD1Q6UVY6 613 aa12.47□□□□□ -0.41
ECM1-201ENST00000346569 PRRT2Q7Z6L0 340 aaPredicted RBP12.47□□□□□ -0.41
ECM1-201ENST00000346569 SAMD3Q8N6K7 520 aa12.47□□□□□ -0.41
ECM1-201ENST00000346569 ATG4CQ96DT6 458 aa12.47□□□□□ -0.41
ECM1-201ENST00000346569 EPSTI1Q96J88 318 aa12.47□□□□□ -0.41
ECM1-201ENST00000346569 RAVER2Q9HCJ3 691 aaKnown RBP12.47□□□□□ -0.41
ECM1-201ENST00000346569 HOXC10Q9NYD6 342 aa12.47□□□□□ -0.41
ECM1-201ENST00000346569 FAM13BQ9NYF5 915 aa12.47□□□□□ -0.41
ECM1-201ENST00000346569 PNMA2Q9UL42 364 aa12.47□□□□□ -0.41
ECM1-201ENST00000346569 VWA3AA6NCI4 1184 aa12.46□□□□□ -0.41
ECM1-201ENST00000346569 GOLGA6L3A6NEY3 463 aa12.46□□□□□ -0.41
ECM1-201ENST00000346569 GCOM1H8Y6P7 765 aaPredicted RBP12.46□□□□□ -0.41
ECM1-201ENST00000346569 POLR2MP0CAP2 368 aa12.46□□□□□ -0.41
ECM1-201ENST00000346569 GCFC2P16383 781 aaKnown RBP12.46□□□□□ -0.41
ECM1-201ENST00000346569 CIITAP33076 1130 aa12.46□□□□□ -0.41
ECM1-201ENST00000346569 SREBF1P36956 1147 aa12.46□□□□□ -0.41
ECM1-201ENST00000346569 HSD17B4P51659 736 aa12.46□□□□□ -0.41
ECM1-201ENST00000346569 MDM2Q00987 491 aaPredicted RBP12.46□□□□□ -0.41
ECM1-201ENST00000346569 PPIL2Q13356 520 aa12.46□□□□□ -0.41
ECM1-201ENST00000346569 MOGSQ13724 837 aa12.46□□□□□ -0.41
ECM1-201ENST00000346569 LONRF3Q496Y0 759 aa12.46□□□□□ -0.41
ECM1-201ENST00000346569 SAMD1Q6SPF0 538 aaPredicted RBP12.46□□□□□ -0.41
ECM1-201ENST00000346569 DTHD1Q6ZMT9 781 aa12.46□□□□□ -0.41
ECM1-201ENST00000346569 PROCA1Q8NCQ7 364 aaPredicted RBP12.46□□□□□ -0.41
ECM1-201ENST00000346569 WNK4Q96J92 1243 aa12.46□□□□□ -0.41
ECM1-201ENST00000346569 CCPG1Q9ULG6 757 aa12.46□□□□□ -0.41
ECM1-201ENST00000346569 RLFQ13129 1914 aa12.46□□□□□ -0.41
ECM1-201ENST00000346569 SLC37A4O43826 429 aa12.45□□□□□ -0.42
ECM1-201ENST00000346569 NEMFO60524 1076 aa12.45□□□□□ -0.42
ECM1-201ENST00000346569 TDP2O95551 362 aa12.45□□□□□ -0.42
ECM1-201ENST00000346569 CFBP00751 764 aa12.45□□□□□ -0.42
ECM1-201ENST00000346569 OR52Z1P0C646 297 aa12.45□□□□□ -0.42
ECM1-201ENST00000346569 HOXA13P31271 388 aaPredicted RBP12.45□□□□□ -0.42
ECM1-201ENST00000346569 APLP1P51693 650 aa12.45□□□□□ -0.42
ECM1-201ENST00000346569 OAZ1P54368 228 aa12.45□□□□□ -0.42
ECM1-201ENST00000346569 ARHGAP4P98171 946 aa12.45□□□□□ -0.42
ECM1-201ENST00000346569 TTLL12Q14166 644 aaPredicted RBP12.45□□□□□ -0.42
ECM1-201ENST00000346569 POTEEQ6S8J3 1075 aa12.45□□□□□ -0.42
ECM1-201ENST00000346569 KRBA2Q6ZNG9 492 aa12.45□□□□□ -0.42
ECM1-201ENST00000346569 CKAP2LQ8IYA6 745 aa12.45□□□□□ -0.42
ECM1-201ENST00000346569 CPXCR1Q8N123 301 aa12.45□□□□□ -0.42
ECM1-201ENST00000346569 HAS1Q92839 578 aa12.45□□□□□ -0.42
ECM1-201ENST00000346569 NAP1L4Q99733 375 aaKnown RBP12.45□□□□□ -0.42
ECM1-201ENST00000346569 SDF4Q9BRK5 362 aa12.45□□□□□ -0.42
ECM1-201ENST00000346569 MAP3K20Q9NYL2 800 aaKnown RBP12.45□□□□□ -0.42
ECM1-201ENST00000346569 A0A087X0B3 334 aa12.45□□□□□ -0.42
ECM1-201ENST00000346569 SPDYE3A6NKU9 549 aa12.45□□□□□ -0.42
ECM1-201ENST00000346569 SPDYE16A6NNV3 312 aaPredicted RBP12.45□□□□□ -0.42
ECM1-201ENST00000346569 POLR2DO15514 142 aaKnown RBP12.45□□□□□ -0.42
ECM1-201ENST00000346569 GJA5P36382 358 aa12.45□□□□□ -0.42
ECM1-201ENST00000346569 FKBP1BP68106 108 aa12.45□□□□□ -0.42
ECM1-201ENST00000346569 PDIA5Q14554 519 aa12.45□□□□□ -0.42
ECM1-201ENST00000346569 TMEM132BQ14DG7 1078 aa12.45□□□□□ -0.42
ECM1-201ENST00000346569 MUM1L1Q5H9M0 696 aa12.45□□□□□ -0.42
ECM1-201ENST00000346569 TREML2Q5T2D2 321 aa12.45□□□□□ -0.42
ECM1-201ENST00000346569 POTEDQ86YR6 584 aa12.45□□□□□ -0.42
ECM1-201ENST00000346569 MCF2L2Q86YR7 1114 aa12.45□□□□□ -0.42
ECM1-201ENST00000346569 IGSF22Q8N9C0 903 aa12.45□□□□□ -0.42
ECM1-201ENST00000346569 SYMPKQ92797 1274 aaKnown RBP12.45□□□□□ -0.42
ECM1-201ENST00000346569 SLC10A4Q96EP9 437 aa12.45□□□□□ -0.42
ECM1-201ENST00000346569 OTUD5Q96G74 571 aa12.45□□□□□ -0.42
ECM1-201ENST00000346569 PANK2Q9BZ23 570 aa12.45□□□□□ -0.42
ECM1-201ENST00000346569 CCSER1Q9C0I3 900 aa12.45□□□□□ -0.42
ECM1-201ENST00000346569 RBSNQ9H1K0 784 aa12.45□□□□□ -0.42
ECM1-201ENST00000346569 TSPY26PQ9H489 355 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms