RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 MAP3K20Q9NYL2 800 aaKnown RBP18.28■□□□□ 0.52
TSPAN4-201ENST00000346501 PRKAG2Q9UGJ0 569 aa18.28■□□□□ 0.52
TSPAN4-201ENST00000346501 ZEB2O60315 1214 aa18.27■□□□□ 0.52
TSPAN4-201ENST00000346501 C6orf222P0C671 652 aaPredicted RBP18.27■□□□□ 0.52
TSPAN4-201ENST00000346501 ADCYAP1R1P41586 468 aa18.27■□□□□ 0.52
TSPAN4-201ENST00000346501 EEPD1Q7L9B9 569 aa18.27■□□□□ 0.52
TSPAN4-201ENST00000346501 NSUN6Q8TEA1 469 aaKnown RBP18.27■□□□□ 0.52
TSPAN4-201ENST00000346501 PIGSQ96S52 555 aa18.27■□□□□ 0.52
TSPAN4-201ENST00000346501 FRMPD3Q5JV73 1810 aa18.26■□□□□ 0.51
TSPAN4-201ENST00000346501 TNRC18O15417 2968 aaPredicted RBP18.26■□□□□ 0.51
TSPAN4-201ENST00000346501 MOXD2PA6NHM9 499 aa18.26■□□□□ 0.51
TSPAN4-201ENST00000346501 HSPA4P34932 840 aa18.26■□□□□ 0.51
TSPAN4-201ENST00000346501 ATN1P54259 1190 aaPredicted RBP18.26■□□□□ 0.51
TSPAN4-201ENST00000346501 BLOC1S2Q6QNY1 142 aa18.26■□□□□ 0.51
TSPAN4-201ENST00000346501 MORC4Q8TE76 937 aa18.26■□□□□ 0.51
TSPAN4-201ENST00000346501 VTI1AQ96AJ9 217 aa18.26■□□□□ 0.51
TSPAN4-201ENST00000346501 MTMR8Q96EF0 704 aa18.26■□□□□ 0.51
TSPAN4-201ENST00000346501 MYL10Q9BUA6 226 aa18.26■□□□□ 0.51
TSPAN4-201ENST00000346501 SPZ1Q9BXG8 430 aa18.26■□□□□ 0.51
TSPAN4-201ENST00000346501 LRRC2Q9BYS8 371 aa18.26■□□□□ 0.51
TSPAN4-201ENST00000346501 RBM28Q9NW13 759 aaKnown RBP18.26■□□□□ 0.51
TSPAN4-201ENST00000346501 NAP1L2Q9ULW6 460 aaPredicted RBP18.26■□□□□ 0.51
TSPAN4-201ENST00000346501 SYNRGQ9UMZ2 1314 aa18.25■□□□□ 0.51
TSPAN4-201ENST00000346501 MYH6P13533 1939 aa18.25■□□□□ 0.51
TSPAN4-201ENST00000346501 SMCHD1A6NHR9 2005 aa18.25■□□□□ 0.51
TSPAN4-201ENST00000346501 BRDTQ58F21 947 aaPredicted RBP18.25■□□□□ 0.51
TSPAN4-201ENST00000346501 GNASQ5JWF2 1037 aa18.25■□□□□ 0.51
TSPAN4-201ENST00000346501 ARHGEF16Q5VV41 709 aa18.25■□□□□ 0.51
TSPAN4-201ENST00000346501 SGMS1Q86VZ5 419 aa18.25■□□□□ 0.51
TSPAN4-201ENST00000346501 MICU3Q86XE3 530 aa18.25■□□□□ 0.51
TSPAN4-201ENST00000346501 FBXO16Q8IX29 292 aaPredicted RBP18.25■□□□□ 0.51
TSPAN4-201ENST00000346501 FANCBQ8NB91 859 aa18.25■□□□□ 0.51
TSPAN4-201ENST00000346501 PIBF1Q8WXW3 757 aa18.25■□□□□ 0.51
TSPAN4-201ENST00000346501 FERMT2Q96AC1 680 aa18.25■□□□□ 0.51
TSPAN4-201ENST00000346501 GLT1D1Q96MS3 346 aa18.25■□□□□ 0.51
TSPAN4-201ENST00000346501 JAKMIP1Q96N16 626 aaKnown RBP18.25■□□□□ 0.51
TSPAN4-201ENST00000346501 IWS1Q96ST2 819 aa18.25■□□□□ 0.51
TSPAN4-201ENST00000346501 RMDN3Q96TC7 470 aa18.25■□□□□ 0.51
TSPAN4-201ENST00000346501 GPHNQ9NQX3 736 aaPredicted RBP18.25■□□□□ 0.51
TSPAN4-201ENST00000346501 PHF24Q9UPV7 400 aa18.25■□□□□ 0.51
TSPAN4-201ENST00000346501 Q9Y3F1 56 aa18.25■□□□□ 0.51
TSPAN4-201ENST00000346501 ZBTB43O43298 467 aa18.24■□□□□ 0.51
TSPAN4-201ENST00000346501 GJA9P57773 515 aa18.24■□□□□ 0.51
TSPAN4-201ENST00000346501 LRRC26Q2I0M4 334 aa18.24■□□□□ 0.51
TSPAN4-201ENST00000346501 SLC39A5Q6ZMH5 540 aa18.24■□□□□ 0.51
TSPAN4-201ENST00000346501 TLK2Q86UE8 772 aa18.24■□□□□ 0.51
TSPAN4-201ENST00000346501 RASEFQ8IZ41 740 aa18.24■□□□□ 0.51
TSPAN4-201ENST00000346501 SYTL5Q8TDW5 730 aaPredicted RBP18.24■□□□□ 0.51
TSPAN4-201ENST00000346501 CUL5Q93034 780 aa18.24■□□□□ 0.51
TSPAN4-201ENST00000346501 LENG1Q96BZ8 264 aaPredicted RBP18.24■□□□□ 0.51
TSPAN4-201ENST00000346501 PURBQ96QR8 312 aaKnown RBP18.24■□□□□ 0.51
TSPAN4-201ENST00000346501 ATP11BQ9Y2G3 1177 aa18.24■□□□□ 0.51
TSPAN4-201ENST00000346501 MCM3APO60318 1980 aa18.24■□□□□ 0.51
TSPAN4-201ENST00000346501 GCOM1H8Y6P7 765 aaPredicted RBP18.23■□□□□ 0.51
TSPAN4-201ENST00000346501 NKRFO15226 690 aaKnown RBP eCLIP18.23■□□□□ 0.512e-6■■■□□ 15.4
TSPAN4-201ENST00000346501 ADAMTS4O75173 837 aa18.23■□□□□ 0.51
TSPAN4-201ENST00000346501 POLR2MP0CAP2 368 aa18.23■□□□□ 0.51
TSPAN4-201ENST00000346501 CST5P28325 142 aaPredicted RBP18.23■□□□□ 0.51
TSPAN4-201ENST00000346501 ACLYP53396 1101 aa18.23■□□□□ 0.51
TSPAN4-201ENST00000346501 PPP2R5BQ15173 497 aa18.23■□□□□ 0.51
TSPAN4-201ENST00000346501 STXBP2Q15833 593 aa18.23■□□□□ 0.51
TSPAN4-201ENST00000346501 KCNA10Q16322 511 aa18.23■□□□□ 0.51
TSPAN4-201ENST00000346501 ADCK5Q3MIX3 580 aa18.23■□□□□ 0.51
TSPAN4-201ENST00000346501 SCFD2Q8WU76 684 aa18.23■□□□□ 0.51
TSPAN4-201ENST00000346501 WDR11Q9BZH6 1224 aa18.23■□□□□ 0.51
TSPAN4-201ENST00000346501 KATNBL1Q9H079 304 aa18.23■□□□□ 0.51
TSPAN4-201ENST00000346501 STARD7Q9NQZ5 370 aa18.23■□□□□ 0.51
TSPAN4-201ENST00000346501 ASTN1O14525 1302 aa18.23■□□□□ 0.51
TSPAN4-201ENST00000346501 CCDC196A0A1B0GTZ2 297 aa18.22■□□□□ 0.51
TSPAN4-201ENST00000346501 DYNC1LI2O43237 492 aaPredicted RBP18.22■□□□□ 0.51
TSPAN4-201ENST00000346501 CYTH3O43739 400 aa18.22■□□□□ 0.51
TSPAN4-201ENST00000346501 RXRAP19793 462 aa18.22■□□□□ 0.51
TSPAN4-201ENST00000346501 RTP1P59025 263 aa18.22■□□□□ 0.51
TSPAN4-201ENST00000346501 EXOSC10Q01780 885 aaKnown RBP18.22■□□□□ 0.51
TSPAN4-201ENST00000346501 TTLL4Q14679 1199 aa18.22■□□□□ 0.51
TSPAN4-201ENST00000346501 RTN1Q16799 776 aa18.22■□□□□ 0.51
TSPAN4-201ENST00000346501 APOA5Q6Q788 366 aa18.22■□□□□ 0.51
TSPAN4-201ENST00000346501 KLHDC9Q8NEP7 349 aa18.22■□□□□ 0.51
TSPAN4-201ENST00000346501 KCNB2Q92953 911 aa18.22■□□□□ 0.51
TSPAN4-201ENST00000346501 LBHD1Q9BQE6 289 aaPredicted RBP18.22■□□□□ 0.51
TSPAN4-201ENST00000346501 UPF3AQ9H1J1 476 aaKnown RBP18.22■□□□□ 0.51
TSPAN4-201ENST00000346501 ZMYND8Q9ULU4 1186 aaPredicted RBP18.22■□□□□ 0.51
TSPAN4-201ENST00000346501 SNX14Q9Y5W7 946 aa18.22■□□□□ 0.51
TSPAN4-201ENST00000346501 KLF18A0A0U1RQI7 1052 aa18.21■□□□□ 0.51
TSPAN4-201ENST00000346501 A0A1W2PQ45 241 aaPredicted RBP18.21■□□□□ 0.51
TSPAN4-201ENST00000346501 A0A1W2PQY0 241 aa18.21■□□□□ 0.51
TSPAN4-201ENST00000346501 CABYRO75952 493 aa18.21■□□□□ 0.51
TSPAN4-201ENST00000346501 EDNRBP24530 442 aa18.21■□□□□ 0.51
TSPAN4-201ENST00000346501 HSD17B4P51659 736 aa18.21■□□□□ 0.51
TSPAN4-201ENST00000346501 RCAN1P53805 252 aa18.21■□□□□ 0.51
TSPAN4-201ENST00000346501 DUSP28Q4G0W2 176 aa18.21■□□□□ 0.51
TSPAN4-201ENST00000346501 TAPT1Q6NXT6 567 aa18.21■□□□□ 0.51
TSPAN4-201ENST00000346501 CHRDL2Q6WN34 429 aa18.21■□□□□ 0.51
TSPAN4-201ENST00000346501 TBC1D5Q92609 795 aa18.21■□□□□ 0.51
TSPAN4-201ENST00000346501 TCEANC2Q96MN5 208 aa18.21■□□□□ 0.51
TSPAN4-201ENST00000346501 TAAR1Q96RJ0 339 aa18.21■□□□□ 0.51
TSPAN4-201ENST00000346501 PDGFCQ9NRA1 345 aa18.21■□□□□ 0.51
TSPAN4-201ENST00000346501 ELP1O95163 1332 aa18.21■□□□□ 0.51
TSPAN4-201ENST00000346501 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.2■□□□□ 0.5
TSPAN4-201ENST00000346501 GOLGA8AA7E2F4 631 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms