RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 SUFUQ9UMX1 484 aa19.74■□□□□ 0.75
SMC4-201ENST00000344722 ADGRG1Q9Y653 693 aa19.74■□□□□ 0.75
SMC4-201ENST00000344722 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.74■□□□□ 0.75
SMC4-201ENST00000344722 TOB2Q14106 344 aaPredicted RBP19.74■□□□□ 0.75
SMC4-201ENST00000344722 DPH6Q7L8W6 267 aa19.74■□□□□ 0.75
SMC4-201ENST00000344722 KIFC2Q96AC6 838 aa19.74■□□□□ 0.75
SMC4-201ENST00000344722 FAM212AQ96EL1 285 aa19.74■□□□□ 0.75
SMC4-201ENST00000344722 EPSTI1Q96J88 318 aa19.74■□□□□ 0.75
SMC4-201ENST00000344722 GCP02774 474 aa19.74■□□□□ 0.75
SMC4-201ENST00000344722 SERPINB6P35237 376 aa19.74■□□□□ 0.75
SMC4-201ENST00000344722 ZBTB17Q13105 803 aa19.74■□□□□ 0.75
SMC4-201ENST00000344722 IL17REQ8NFR9 667 aa19.74■□□□□ 0.75
SMC4-201ENST00000344722 ZBTB21Q9ULJ3 1066 aa19.74■□□□□ 0.75
SMC4-201ENST00000344722 ARHGEF5Q12774 1597 aa19.73■□□□□ 0.75
SMC4-201ENST00000344722 RASGRF2O14827 1237 aa19.73■□□□□ 0.75
SMC4-201ENST00000344722 ACTN3Q08043 901 aaPredicted RBP19.73■□□□□ 0.75
SMC4-201ENST00000344722 PDCD7Q8N8D1 485 aaKnown RBP19.73■□□□□ 0.75
SMC4-201ENST00000344722 RUBCNQ92622 972 aa19.73■□□□□ 0.75
SMC4-201ENST00000344722 SETDB2Q96T68 719 aa19.73■□□□□ 0.75
SMC4-201ENST00000344722 FMO2Q99518 471 aa19.73■□□□□ 0.75
SMC4-201ENST00000344722 SH3GL3Q99963 347 aa19.73■□□□□ 0.75
SMC4-201ENST00000344722 CENPKQ9BS16 269 aa19.73■□□□□ 0.75
SMC4-201ENST00000344722 CPSF1Q10570 1443 aaKnown RBP19.73■□□□□ 0.75
SMC4-201ENST00000344722 N4BP1O75113 896 aaKnown RBP19.73■□□□□ 0.75
SMC4-201ENST00000344722 STK10O94804 968 aaKnown RBP19.73■□□□□ 0.75
SMC4-201ENST00000344722 EXOC3L4Q17RC7 722 aa19.73■□□□□ 0.75
SMC4-201ENST00000344722 FAM26FQ5R3K3 315 aa19.73■□□□□ 0.75
SMC4-201ENST00000344722 NEK8Q86SG6 692 aa19.73■□□□□ 0.75
SMC4-201ENST00000344722 ZMYND12Q9H0C1 365 aa19.73■□□□□ 0.75
SMC4-201ENST00000344722 RAB20Q9NX57 234 aa19.73■□□□□ 0.75
SMC4-201ENST00000344722 PDE6AP16499 860 aa19.73■□□□□ 0.75
SMC4-201ENST00000344722 PCDH11XQ9BZA7 1347 aa19.73■□□□□ 0.75
SMC4-201ENST00000344722 PCDH11YQ9BZA8 1340 aa19.73■□□□□ 0.75
SMC4-201ENST00000344722 CHMP2AO43633 222 aa19.72■□□□□ 0.75
SMC4-201ENST00000344722 HOXA7P31268 230 aaPredicted RBP19.72■□□□□ 0.75
SMC4-201ENST00000344722 DYNC1I2Q13409 638 aaKnown RBP19.72■□□□□ 0.75
SMC4-201ENST00000344722 CTAGE3PQ8IX95 158 aa19.72■□□□□ 0.75
SMC4-201ENST00000344722 AK8Q96MA6 479 aa19.72■□□□□ 0.75
SMC4-201ENST00000344722 SERPING1P05155 500 aa19.72■□□□□ 0.75
SMC4-201ENST00000344722 UBE3CQ15386 1083 aa19.72■□□□□ 0.75
SMC4-201ENST00000344722 E4F1Q66K89 784 aaPredicted RBP19.72■□□□□ 0.75
SMC4-201ENST00000344722 AEBP2Q6ZN18 517 aaPredicted RBP19.72■□□□□ 0.75
SMC4-201ENST00000344722 PSMD1Q99460 953 aa19.72■□□□□ 0.75
SMC4-201ENST00000344722 SAP30BPQ9UHR5 308 aaKnown RBP19.72■□□□□ 0.75
SMC4-201ENST00000344722 CREB3O43889 395 aa19.72■□□□□ 0.75
SMC4-201ENST00000344722 REREQ9P2R6 1566 aa19.72■□□□□ 0.75
SMC4-201ENST00000344722 ARPP21Q9UBL0 812 aaPredicted RBP19.72■□□□□ 0.75
SMC4-201ENST00000344722 MAST3O60307 1309 aa19.72■□□□□ 0.75
SMC4-201ENST00000344722 RSAD2Q8WXG1 361 aa19.72■□□□□ 0.75
SMC4-201ENST00000344722 CCDC188H7C350 402 aa19.71■□□□□ 0.75
SMC4-201ENST00000344722 VPS41P49754 854 aa19.71■□□□□ 0.75
SMC4-201ENST00000344722 IRX1P78414 480 aaPredicted RBP19.71■□□□□ 0.75
SMC4-201ENST00000344722 CYP27A1Q02318 531 aa19.71■□□□□ 0.75
SMC4-201ENST00000344722 TTLL7Q6ZT98 887 aa19.71■□□□□ 0.75
SMC4-201ENST00000344722 ELAC2Q9BQ52 826 aaKnown RBP19.71■□□□□ 0.75
SMC4-201ENST00000344722 TACC3Q9Y6A5 838 aa19.71■□□□□ 0.75
SMC4-201ENST00000344722 SART1O43290 800 aaKnown RBP19.71■□□□□ 0.75
SMC4-201ENST00000344722 ATP5HO75947 161 aa19.71■□□□□ 0.75
SMC4-201ENST00000344722 MMEP08473 750 aa19.71■□□□□ 0.75
SMC4-201ENST00000344722 YIPF3Q9GZM5 350 aa19.71■□□□□ 0.75
SMC4-201ENST00000344722 BIN2Q9UBW5 565 aaPredicted RBP19.71■□□□□ 0.75
SMC4-201ENST00000344722 CFAP73A6NFT4 308 aa19.71■□□□□ 0.75
SMC4-201ENST00000344722 CEP170Q5SW79 1584 aa19.71■□□□□ 0.75
SMC4-201ENST00000344722 MEFVO15553 781 aaPredicted RBP19.71■□□□□ 0.75
SMC4-201ENST00000344722 CCNE1P24864 410 aa19.71■□□□□ 0.75
SMC4-201ENST00000344722 TFAP4Q01664 338 aa19.71■□□□□ 0.75
SMC4-201ENST00000344722 LMNB2Q03252 620 aa19.71■□□□□ 0.75
SMC4-201ENST00000344722 SRGAP2O75044 1071 aa19.71■□□□□ 0.74
SMC4-201ENST00000344722 DIXDC1Q155Q3 683 aa19.71■□□□□ 0.74
SMC4-201ENST00000344722 MPHOSPH6Q99547 160 aaKnown RBP19.71■□□□□ 0.74
SMC4-201ENST00000344722 OGFOD1Q8N543 542 aa19.7■□□□□ 0.74
SMC4-201ENST00000344722 AATFQ9NY61 560 aaKnown RBP eCLIP19.7■□□□□ 0.744e-8■■■■■ 116
SMC4-201ENST00000344722 ST13P4Q8IZP2 240 aaPredicted RBP19.7■□□□□ 0.74
SMC4-201ENST00000344722 ALDH8A1Q9H2A2 487 aaPredicted RBP19.7■□□□□ 0.74
SMC4-201ENST00000344722 RPAP1Q9BWH6 1393 aaPredicted RBP19.7■□□□□ 0.74
SMC4-201ENST00000344722 MAPK13O15264 365 aa19.7■□□□□ 0.74
SMC4-201ENST00000344722 HIBADHP31937 336 aaKnown RBP19.7■□□□□ 0.74
SMC4-201ENST00000344722 TRIM42Q8IWZ5 723 aa19.7■□□□□ 0.74
SMC4-201ENST00000344722 PTPN22Q9Y2R2 807 aa19.7■□□□□ 0.74
SMC4-201ENST00000344722 GEN1Q17RS7 908 aa19.7■□□□□ 0.74
SMC4-201ENST00000344722 CAPRIN2Q6IMN6 1127 aaKnown RBP19.7■□□□□ 0.74
SMC4-201ENST00000344722 CCT6BQ92526 530 aa19.7■□□□□ 0.74
SMC4-201ENST00000344722 WDR24Q96S15 920 aa19.7■□□□□ 0.74
SMC4-201ENST00000344722 ATP8A2Q9NTI2 1148 aa19.7■□□□□ 0.74
SMC4-201ENST00000344722 F8W031 263 aaPredicted RBP19.69■□□□□ 0.74
SMC4-201ENST00000344722 M0R2C6 588 aa19.69■□□□□ 0.74
SMC4-201ENST00000344722 ECEL1O95672 775 aa19.69■□□□□ 0.74
SMC4-201ENST00000344722 IFNB1P01574 187 aa19.69■□□□□ 0.74
SMC4-201ENST00000344722 PCP11498 1178 aaKnown RBP19.69■□□□□ 0.74
SMC4-201ENST00000344722 IL2RBP14784 551 aa19.69■□□□□ 0.74
SMC4-201ENST00000344722 PDE6CP51160 858 aa19.69■□□□□ 0.74
SMC4-201ENST00000344722 FAM47AQ5JRC9 791 aa19.69■□□□□ 0.74
SMC4-201ENST00000344722 SPDL1Q96EA4 605 aa19.69■□□□□ 0.74
SMC4-201ENST00000344722 VSNL1P62760 191 aa19.69■□□□□ 0.74
SMC4-201ENST00000344722 PPP2R2AP63151 447 aa19.69■□□□□ 0.74
SMC4-201ENST00000344722 PARP10Q53GL7 1025 aa19.69■□□□□ 0.74
SMC4-201ENST00000344722 ATP6V1G3Q96LB4 118 aa19.69■□□□□ 0.74
SMC4-201ENST00000344722 SH2B2O14492 632 aaPredicted RBP19.69■□□□□ 0.74
SMC4-201ENST00000344722 IFNAR1P17181 557 aa19.69■□□□□ 0.74
SMC4-201ENST00000344722 RASA3Q14644 834 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms