RNA–Protein interactions for RNA: ENST00000344114.8

HERPUD1-202, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best) BASIC

Gene HERPUD1, Length 1,388 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-202ENST00000344114 POLR3DP05423 398 aaPredicted RBP15.56■□□□□ 0.08
HERPUD1-202ENST00000344114 CALM1P0DP23 149 aa15.56■□□□□ 0.08
HERPUD1-202ENST00000344114 CALM2P0DP24 149 aa15.56■□□□□ 0.08
HERPUD1-202ENST00000344114 CALM3P0DP25 149 aa15.56■□□□□ 0.08
HERPUD1-202ENST00000344114 NCLP19338 710 aaKnown RBP15.56■□□□□ 0.08
HERPUD1-202ENST00000344114 KRT85P78386 507 aa15.56■□□□□ 0.08
HERPUD1-202ENST00000344114 TLE2Q04725 743 aa15.56■□□□□ 0.08
HERPUD1-202ENST00000344114 RESTQ13127 1097 aa15.56■□□□□ 0.08
HERPUD1-202ENST00000344114 RTN1Q16799 776 aa15.56■□□□□ 0.08
HERPUD1-202ENST00000344114 KIAA1755Q5JYT7 1200 aa15.56■□□□□ 0.08
HERPUD1-202ENST00000344114 IFIT1BQ5T764 474 aaKnown RBP15.56■□□□□ 0.08
HERPUD1-202ENST00000344114 RAB11FIP4Q86YS3 637 aa15.56■□□□□ 0.08
HERPUD1-202ENST00000344114 ENAHQ8N8S7 591 aaPredicted RBP15.56■□□□□ 0.08
HERPUD1-202ENST00000344114 SYMPKQ92797 1274 aaKnown RBP15.56■□□□□ 0.08
HERPUD1-202ENST00000344114 FERMT2Q96AC1 680 aa15.56■□□□□ 0.08
HERPUD1-202ENST00000344114 TANGO6Q9C0B7 1094 aa15.56■□□□□ 0.08
HERPUD1-202ENST00000344114 NRBP1Q9UHY1 535 aa15.56■□□□□ 0.08
HERPUD1-202ENST00000344114 CNPY2Q9Y2B0 182 aa15.56■□□□□ 0.08
HERPUD1-202ENST00000344114 TSPY2A6NKD2 308 aa15.55■□□□□ 0.08
HERPUD1-202ENST00000344114 PRDM1O75626 825 aa15.55■□□□□ 0.08
HERPUD1-202ENST00000344114 CLTBP09497 229 aa15.55■□□□□ 0.08
HERPUD1-202ENST00000344114 IFNAR1P17181 557 aa15.55■□□□□ 0.08
HERPUD1-202ENST00000344114 CDC27P30260 824 aa15.55■□□□□ 0.08
HERPUD1-202ENST00000344114 EVX2Q03828 476 aa15.55■□□□□ 0.08
HERPUD1-202ENST00000344114 NTRK3Q16288 839 aa15.55■□□□□ 0.08
HERPUD1-202ENST00000344114 C16orf86Q6ZW13 317 aa15.55■□□□□ 0.08
HERPUD1-202ENST00000344114 CHAMP1Q96JM3 812 aa15.55■□□□□ 0.08
HERPUD1-202ENST00000344114 C8orf76Q96K31 380 aa15.55■□□□□ 0.08
HERPUD1-202ENST00000344114 RNPC3Q96LT9 517 aaKnown RBP15.55■□□□□ 0.08
HERPUD1-202ENST00000344114 ELP1O95163 1332 aa15.54■□□□□ 0.08
HERPUD1-202ENST00000344114 KIAA0355O15063 1070 aa15.54■□□□□ 0.08
HERPUD1-202ENST00000344114 MYCNP04198 464 aaPredicted RBP15.54■□□□□ 0.08
HERPUD1-202ENST00000344114 RXRAP19793 462 aa15.54■□□□□ 0.08
HERPUD1-202ENST00000344114 ADD1P35611 737 aaKnown RBP15.54■□□□□ 0.08
HERPUD1-202ENST00000344114 EPHB4P54760 987 aa15.54■□□□□ 0.08
HERPUD1-202ENST00000344114 DNM1Q05193 864 aaKnown RBP15.54■□□□□ 0.08
HERPUD1-202ENST00000344114 FOXD4L6Q3SYB3 417 aaPredicted RBP15.54■□□□□ 0.08
HERPUD1-202ENST00000344114 FOXD4L3Q6VB84 417 aaPredicted RBP15.54■□□□□ 0.08
HERPUD1-202ENST00000344114 CATIPQ7Z7H3 387 aa15.54■□□□□ 0.08
HERPUD1-202ENST00000344114 FERMT3Q86UX7 667 aa15.54■□□□□ 0.08
HERPUD1-202ENST00000344114 NCAPG2Q86XI2 1143 aa15.54■□□□□ 0.08
HERPUD1-202ENST00000344114 WASF1Q92558 559 aa15.54■□□□□ 0.08
HERPUD1-202ENST00000344114 ATG4CQ96DT6 458 aa15.54■□□□□ 0.08
HERPUD1-202ENST00000344114 MYL10Q9BUA6 226 aa15.54■□□□□ 0.08
HERPUD1-202ENST00000344114 XPNPEP3Q9NQH7 507 aa15.54■□□□□ 0.08
HERPUD1-202ENST00000344114 FAM217BQ9NTX9 383 aaPredicted RBP15.54■□□□□ 0.08
HERPUD1-202ENST00000344114 RBM28Q9NW13 759 aaKnown RBP15.54■□□□□ 0.08
HERPUD1-202ENST00000344114 MPHOSPH10O00566 681 aaKnown RBP15.53■□□□□ 0.08
HERPUD1-202ENST00000344114 FCER1AP12319 257 aa15.53■□□□□ 0.08
HERPUD1-202ENST00000344114 SSRP1Q08945 709 aaKnown RBP15.53■□□□□ 0.08
HERPUD1-202ENST00000344114 PLS1Q14651 629 aa15.53■□□□□ 0.08
HERPUD1-202ENST00000344114 ATL3Q6DD88 541 aa15.53■□□□□ 0.08
HERPUD1-202ENST00000344114 TMEM179Q6ZVK1 233 aa15.53■□□□□ 0.08
HERPUD1-202ENST00000344114 SIAH1Q8IUQ4 282 aa15.53■□□□□ 0.08
HERPUD1-202ENST00000344114 SCAND2PQ9GZW5 306 aaPredicted RBP15.53■□□□□ 0.08
HERPUD1-202ENST00000344114 MKNK2Q9HBH9 465 aa15.53■□□□□ 0.08
HERPUD1-202ENST00000344114 TCP11L1Q9NUJ3 509 aa15.53■□□□□ 0.08
HERPUD1-202ENST00000344114 TMX2Q9Y320 296 aa15.53■□□□□ 0.08
HERPUD1-202ENST00000344114 PLIN4Q96Q06 1357 aa15.53■□□□□ 0.08
HERPUD1-202ENST00000344114 A0A1W2PQ45 241 aaPredicted RBP15.52■□□□□ 0.08
HERPUD1-202ENST00000344114 A0A1W2PQY0 241 aa15.52■□□□□ 0.08
HERPUD1-202ENST00000344114 FIBPO43427 364 aa15.52■□□□□ 0.08
HERPUD1-202ENST00000344114 FLOT1O75955 427 aa15.52■□□□□ 0.08
HERPUD1-202ENST00000344114 SLC25A27O95847 323 aa15.52■□□□□ 0.08
HERPUD1-202ENST00000344114 RARBP10826 455 aa15.52■□□□□ 0.08
HERPUD1-202ENST00000344114 UBE2HP62256 183 aa15.52■□□□□ 0.08
HERPUD1-202ENST00000344114 RNF180Q86T96 592 aa15.52■□□□□ 0.08
HERPUD1-202ENST00000344114 CCDC144CPQ8IYA2 1237 aa15.52■□□□□ 0.08
HERPUD1-202ENST00000344114 TRIM22Q8IYM9 498 aa15.52■□□□□ 0.08
HERPUD1-202ENST00000344114 ZNF444Q8N0Y2 327 aaPredicted RBP15.52■□□□□ 0.08
HERPUD1-202ENST00000344114 FANCBQ8NB91 859 aa15.52■□□□□ 0.08
HERPUD1-202ENST00000344114 FBXO18Q8NFZ0 1043 aa15.52■□□□□ 0.08
HERPUD1-202ENST00000344114 GPT2Q8TD30 523 aa15.52■□□□□ 0.08
HERPUD1-202ENST00000344114 VCPKMTQ9H867 229 aa15.52■□□□□ 0.08
HERPUD1-202ENST00000344114 SWAP70Q9UH65 585 aa15.52■□□□□ 0.08
HERPUD1-202ENST00000344114 ADAMTS5Q9UNA0 930 aa15.52■□□□□ 0.08
HERPUD1-202ENST00000344114 DIS3Q9Y2L1 958 aaKnown RBP15.52■□□□□ 0.08
HERPUD1-202ENST00000344114 WDR46O15213 610 aaKnown RBP15.51■□□□□ 0.07
HERPUD1-202ENST00000344114 PGK1P00558 417 aa15.51■□□□□ 0.07
HERPUD1-202ENST00000344114 RAG1P15918 1043 aa15.51■□□□□ 0.07
HERPUD1-202ENST00000344114 RASA1P20936 1047 aa15.51■□□□□ 0.07
HERPUD1-202ENST00000344114 DEKP35659 375 aaKnown RBP15.51■□□□□ 0.07
HERPUD1-202ENST00000344114 FOSBP53539 338 aa15.51■□□□□ 0.07
HERPUD1-202ENST00000344114 FPGSQ05932 587 aa15.51■□□□□ 0.07
HERPUD1-202ENST00000344114 GRIN2CQ14957 1233 aa15.51■□□□□ 0.07
HERPUD1-202ENST00000344114 TMEM132BQ14DG7 1078 aa15.51■□□□□ 0.07
HERPUD1-202ENST00000344114 DGKHQ86XP1 1220 aa15.51■□□□□ 0.07
HERPUD1-202ENST00000344114 SLC44A5Q8NCS7 719 aa15.51■□□□□ 0.07
HERPUD1-202ENST00000344114 NUP133Q8WUM0 1156 aa15.51■□□□□ 0.07
HERPUD1-202ENST00000344114 ANKS1AQ92625 1134 aa15.51■□□□□ 0.07
HERPUD1-202ENST00000344114 DYNLL2Q96FJ2 89 aa15.51■□□□□ 0.07
HERPUD1-202ENST00000344114 TINF2Q9BSI4 451 aa15.51■□□□□ 0.07
HERPUD1-202ENST00000344114 ALG1Q9BT22 464 aa15.51■□□□□ 0.07
HERPUD1-202ENST00000344114 GDPD2Q9HCC8 539 aa15.51■□□□□ 0.07
HERPUD1-202ENST00000344114 ARHGEF10LQ9HCE6 1279 aa15.51■□□□□ 0.07
HERPUD1-202ENST00000344114 ISY1Q9ULR0 285 aaKnown RBP15.51■□□□□ 0.07
HERPUD1-202ENST00000344114 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.5■□□□□ 0.07
HERPUD1-202ENST00000344114 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.5■□□□□ 0.07
HERPUD1-202ENST00000344114 ADAMTS4O75173 837 aa15.5■□□□□ 0.07
HERPUD1-202ENST00000344114 ZNF865P0CJ78 1059 aaPredicted RBP15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms