RNA–Protein interactions for RNA: ENST00000343975.9

HMGCR-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 1 (best) BASIC

Gene HMGCR, Length 3,681 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-202ENST00000343975 MAF1Q9H063 256 aa9.28□□□□□ -0.92
HMGCR-202ENST00000343975 IGF2BP3O00425 579 aaKnown RBP eCLIP9.28□□□□□ -0.92
HMGCR-202ENST00000343975 CD2BP2O95400 341 aaKnown RBP9.28□□□□□ -0.92
HMGCR-202ENST00000343975 RASGRP2Q7LDG7 609 aa9.28□□□□□ -0.92
HMGCR-202ENST00000343975 TRMT44Q8IYL2 757 aaKnown RBP9.28□□□□□ -0.92
HMGCR-202ENST00000343975 RIC8AQ9NPQ8 531 aa9.28□□□□□ -0.92
HMGCR-202ENST00000343975 TESPA1A2RU30 521 aaPredicted RBP9.27□□□□□ -0.92
HMGCR-202ENST00000343975 EIF2AK2P19525 551 aaKnown RBP9.27□□□□□ -0.92
HMGCR-202ENST00000343975 HOXA13P31271 388 aaPredicted RBP9.27□□□□□ -0.92
HMGCR-202ENST00000343975 PRMT2P55345 433 aa9.27□□□□□ -0.92
HMGCR-202ENST00000343975 TMEM132BQ14DG7 1078 aa9.27□□□□□ -0.92
HMGCR-202ENST00000343975 STXBP2Q15833 593 aa9.27□□□□□ -0.92
HMGCR-202ENST00000343975 NEK8Q86SG6 692 aa9.27□□□□□ -0.92
HMGCR-202ENST00000343975 ANO3Q9BYT9 981 aa9.27□□□□□ -0.92
HMGCR-202ENST00000343975 FOXP1Q9H334 677 aaPredicted RBP9.27□□□□□ -0.92
HMGCR-202ENST00000343975 ZHX1Q9UKY1 873 aaPredicted RBP9.27□□□□□ -0.92
HMGCR-202ENST00000343975 LAMB1P07942 1786 aa9.27□□□□□ -0.93
HMGCR-202ENST00000343975 SLC15A5A6NIM6 579 aa9.27□□□□□ -0.93
HMGCR-202ENST00000343975 MMP1P03956 469 aa9.27□□□□□ -0.93
HMGCR-202ENST00000343975 GCFC2P16383 781 aaKnown RBP9.27□□□□□ -0.93
HMGCR-202ENST00000343975 CYP2B6P20813 491 aa9.27□□□□□ -0.93
HMGCR-202ENST00000343975 CNGA1P29973 690 aa9.27□□□□□ -0.93
HMGCR-202ENST00000343975 UBXN2AP68543 259 aa9.27□□□□□ -0.93
HMGCR-202ENST00000343975 GPR25O00155 361 aa9.27□□□□□ -0.93
HMGCR-202ENST00000343975 CTCFP49711 727 aaPredicted RBP9.27□□□□□ -0.93
HMGCR-202ENST00000343975 CEBPZQ03701 1054 aaKnown RBP9.27□□□□□ -0.93
HMGCR-202ENST00000343975 NOSTRINQ8IVI9 506 aa9.27□□□□□ -0.93
HMGCR-202ENST00000343975 RNF186Q9NXI6 227 aa9.27□□□□□ -0.93
HMGCR-202ENST00000343975 SAGE1Q9NXZ1 904 aa9.27□□□□□ -0.93
HMGCR-202ENST00000343975 MORF4L1Q9UBU8 362 aa9.27□□□□□ -0.93
HMGCR-202ENST00000343975 SAMM50Q9Y512 469 aa9.27□□□□□ -0.93
HMGCR-202ENST00000343975 BTBD18B2RXH4 712 aa9.26□□□□□ -0.93
HMGCR-202ENST00000343975 STXBP3O00186 592 aa9.26□□□□□ -0.93
HMGCR-202ENST00000343975 GNRH1P01148 92 aa9.26□□□□□ -0.93
HMGCR-202ENST00000343975 TRAPPC10P48553 1259 aa9.26□□□□□ -0.93
HMGCR-202ENST00000343975 RPS6P62753 249 aaKnown RBP9.26□□□□□ -0.93
HMGCR-202ENST00000343975 UBE2SQ16763 222 aa9.26□□□□□ -0.93
HMGCR-202ENST00000343975 GPAT2Q6NUI2 795 aa9.26□□□□□ -0.93
HMGCR-202ENST00000343975 XRRA1Q6P2D8 792 aa9.26□□□□□ -0.93
HMGCR-202ENST00000343975 USP17L6PQ6QN14 398 aa9.26□□□□□ -0.93
HMGCR-202ENST00000343975 ERMNQ8TAM6 284 aa9.26□□□□□ -0.93
HMGCR-202ENST00000343975 SCAND2PQ9GZW5 306 aaPredicted RBP9.26□□□□□ -0.93
HMGCR-202ENST00000343975 PCDHA6Q9UN73 950 aa9.26□□□□□ -0.93
HMGCR-202ENST00000343975 TRIM17Q9Y577 477 aa9.26□□□□□ -0.93
HMGCR-202ENST00000343975 PCDHA8Q9Y5H6 950 aa9.26□□□□□ -0.93
HMGCR-202ENST00000343975 MRVI1Q9Y6F6 885 aa9.26□□□□□ -0.93
HMGCR-202ENST00000343975 ATP2A1O14983 1001 aa9.26□□□□□ -0.93
HMGCR-202ENST00000343975 CYTH3O43739 400 aa9.26□□□□□ -0.93
HMGCR-202ENST00000343975 NTRK3Q16288 839 aa9.26□□□□□ -0.93
HMGCR-202ENST00000343975 ATL3Q6DD88 541 aa9.26□□□□□ -0.93
HMGCR-202ENST00000343975 NBPF11Q86T75 865 aa9.26□□□□□ -0.93
HMGCR-202ENST00000343975 AIFM3Q96NN9 605 aa9.26□□□□□ -0.93
HMGCR-202ENST00000343975 SDF4Q9BRK5 362 aa9.26□□□□□ -0.93
HMGCR-202ENST00000343975 ZMYND12Q9H0C1 365 aa9.26□□□□□ -0.93
HMGCR-202ENST00000343975 NOP56O00567 594 aaKnown RBP9.26□□□□□ -0.93
HMGCR-202ENST00000343975 ME1P48163 572 aa9.26□□□□□ -0.93
HMGCR-202ENST00000343975 TTC38Q5R3I4 469 aa9.26□□□□□ -0.93
HMGCR-202ENST00000343975 FAM217BQ9NTX9 383 aaPredicted RBP9.26□□□□□ -0.93
HMGCR-202ENST00000343975 RBPJLQ9UBG7 517 aa9.26□□□□□ -0.93
HMGCR-202ENST00000343975 CCNT1O60563 726 aaKnown RBP9.25□□□□□ -0.93
HMGCR-202ENST00000343975 F13A1P00488 732 aa9.25□□□□□ -0.93
HMGCR-202ENST00000343975 INF2Q27J81 1249 aa9.25□□□□□ -0.93
HMGCR-202ENST00000343975 KIAA1755Q5JYT7 1200 aa9.25□□□□□ -0.93
HMGCR-202ENST00000343975 KCNV1Q6PIU1 500 aa9.25□□□□□ -0.93
HMGCR-202ENST00000343975 CCDC73Q6ZRK6 1079 aa9.25□□□□□ -0.93
HMGCR-202ENST00000343975 GPR142Q7Z601 462 aa9.25□□□□□ -0.93
HMGCR-202ENST00000343975 PLA2G4DQ86XP0 818 aa9.25□□□□□ -0.93
HMGCR-202ENST00000343975 ABRAQ8N0Z2 381 aa9.25□□□□□ -0.93
HMGCR-202ENST00000343975 TNPO1Q92973 898 aaKnown RBP9.25□□□□□ -0.93
HMGCR-202ENST00000343975 AP5M1Q9H0R1 490 aa9.25□□□□□ -0.93
HMGCR-202ENST00000343975 NID2Q14112 1375 aa9.25□□□□□ -0.93
HMGCR-202ENST00000343975 FIBPO43427 364 aa9.25□□□□□ -0.93
HMGCR-202ENST00000343975 ADORA2AP29274 412 aa9.25□□□□□ -0.93
HMGCR-202ENST00000343975 RGS22Q8NE09 1264 aa9.25□□□□□ -0.93
HMGCR-202ENST00000343975 DNERQ8NFT8 737 aa9.25□□□□□ -0.93
HMGCR-202ENST00000343975 SPATA32Q96LK8 384 aa9.25□□□□□ -0.93
HMGCR-202ENST00000343975 MLXIPQ9HAP2 919 aa9.25□□□□□ -0.93
HMGCR-202ENST00000343975 FAM13BQ9NYF5 915 aa9.25□□□□□ -0.93
HMGCR-202ENST00000343975 BTBD7Q9P203 1132 aa9.25□□□□□ -0.93
HMGCR-202ENST00000343975 ZNF214Q9UL59 606 aaPredicted RBP9.25□□□□□ -0.93
HMGCR-202ENST00000343975 BAZ2BQ9UIF8 2168 aaKnown RBP9.25□□□□□ -0.93
HMGCR-202ENST00000343975 NFIBO00712 420 aa9.25□□□□□ -0.93
HMGCR-202ENST00000343975 DKC1O60832 514 aaKnown RBP eCLIP9.25□□□□□ -0.936e-6■■■□□ 15
HMGCR-202ENST00000343975 MCM7P33993 719 aa9.25□□□□□ -0.93
HMGCR-202ENST00000343975 MAP2K5Q13163 448 aa9.25□□□□□ -0.93
HMGCR-202ENST00000343975 RASGRP4Q8TDF6 673 aa9.25□□□□□ -0.93
HMGCR-202ENST00000343975 TBCKQ8TEA7 893 aa9.25□□□□□ -0.93
HMGCR-202ENST00000343975 TRIM47Q96LD4 638 aa9.25□□□□□ -0.93
HMGCR-202ENST00000343975 IWS1Q96ST2 819 aa9.25□□□□□ -0.93
HMGCR-202ENST00000343975 A1CFQ9NQ94 594 aaKnown RBP9.25□□□□□ -0.93
HMGCR-202ENST00000343975 LAMA4Q16363 1823 aa9.24□□□□□ -0.93
HMGCR-202ENST00000343975 DOCK1Q14185 1865 aa9.24□□□□□ -0.93
HMGCR-202ENST00000343975 STAM2O75886 525 aa9.24□□□□□ -0.93
HMGCR-202ENST00000343975 PTPREP23469 700 aa9.24□□□□□ -0.93
HMGCR-202ENST00000343975 ARHGAP4P98171 946 aa9.24□□□□□ -0.93
HMGCR-202ENST00000343975 SETQ01105 290 aaPredicted RBP9.24□□□□□ -0.93
HMGCR-202ENST00000343975 CCDC47Q96A33 483 aaKnown RBP9.24□□□□□ -0.93
HMGCR-202ENST00000343975 HOOK1Q9UJC3 728 aaKnown RBP9.24□□□□□ -0.93
HMGCR-202ENST00000343975 STK24Q9Y6E0 443 aa9.24□□□□□ -0.93
HMGCR-202ENST00000343975 DDX60LQ5H9U9 1706 aaKnown RBP9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms