RNA–Protein interactions for RNA: ENST00000343257.6

CLCN1-201, Transcript of chloride voltage-gated channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN1, Length 3,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-201ENST00000343257 CCDC155Q8N6L0 562 aa16.48■□□□□ 0.23
CLCN1-201ENST00000343257 ATP6V1G3Q96LB4 118 aa16.48■□□□□ 0.23
CLCN1-201ENST00000343257 PURBQ96QR8 312 aaKnown RBP16.48■□□□□ 0.23
CLCN1-201ENST00000343257 TLR10Q9BXR5 811 aa16.48■□□□□ 0.23
CLCN1-201ENST00000343257 RNF26Q9BY78 433 aaPredicted RBP16.48■□□□□ 0.23
CLCN1-201ENST00000343257 PCCAP05165 728 aaPredicted RBP16.48■□□□□ 0.23
CLCN1-201ENST00000343257 EEF1GP26641 437 aaKnown RBP16.48■□□□□ 0.23
CLCN1-201ENST00000343257 CDC25CP30307 473 aa16.48■□□□□ 0.23
CLCN1-201ENST00000343257 NAIF1Q69YI7 327 aaPredicted RBP16.48■□□□□ 0.23
CLCN1-201ENST00000343257 DUSP9Q99956 384 aaKnown RBP16.48■□□□□ 0.23
CLCN1-201ENST00000343257 OSBPL7Q9BZF2 842 aa16.48■□□□□ 0.23
CLCN1-201ENST00000343257 NACAP1Q9BZK3 213 aa16.48■□□□□ 0.23
CLCN1-201ENST00000343257 TTYH3Q9C0H2 523 aa16.48■□□□□ 0.23
CLCN1-201ENST00000343257 NMT2O60551 498 aa16.47■□□□□ 0.23
CLCN1-201ENST00000343257 TCP1P17987 556 aaKnown RBP16.47■□□□□ 0.23
CLCN1-201ENST00000343257 GBP2P32456 591 aaPredicted RBP16.47■□□□□ 0.23
CLCN1-201ENST00000343257 MAP3K12Q12852 859 aa16.47■□□□□ 0.23
CLCN1-201ENST00000343257 CAVIN3Q969G5 261 aa16.47■□□□□ 0.23
CLCN1-201ENST00000343257 NLRC4Q9NPP4 1024 aa16.47■□□□□ 0.23
CLCN1-201ENST00000343257 BAIAP2L1Q9UHR4 511 aa16.47■□□□□ 0.23
CLCN1-201ENST00000343257 PHF20L1A8MW92 1017 aa16.47■□□□□ 0.23
CLCN1-201ENST00000343257 SLC1A4P43007 532 aa16.47■□□□□ 0.23
CLCN1-201ENST00000343257 HLFQ16534 295 aa16.47■□□□□ 0.23
CLCN1-201ENST00000343257 IFIT1BQ5T764 474 aaKnown RBP16.47■□□□□ 0.23
CLCN1-201ENST00000343257 TSGA10Q9BZW7 698 aa16.47■□□□□ 0.23
CLCN1-201ENST00000343257 CCDC189A1A4V9 331 aa16.46■□□□□ 0.23
CLCN1-201ENST00000343257 GOLGA6L10A6NI86 522 aa16.46■□□□□ 0.23
CLCN1-201ENST00000343257 FAM107AO95990 144 aa16.46■□□□□ 0.23
CLCN1-201ENST00000343257 EVX2Q03828 476 aa16.46■□□□□ 0.23
CLCN1-201ENST00000343257 PAK2Q13177 524 aa16.46■□□□□ 0.23
CLCN1-201ENST00000343257 TTI2Q6NXR4 508 aa16.46■□□□□ 0.23
CLCN1-201ENST00000343257 DNAAF5Q86Y56 855 aa16.46■□□□□ 0.23
CLCN1-201ENST00000343257 FUKQ8N0W3 1084 aa16.46■□□□□ 0.23
CLCN1-201ENST00000343257 GPKOWQ92917 476 aaPredicted RBP eCLIP16.46■□□□□ 0.23
CLCN1-201ENST00000343257 MYO5AQ9Y4I1 1855 aaKnown RBP16.46■□□□□ 0.23
CLCN1-201ENST00000343257 EHHADHQ08426 723 aa16.46■□□□□ 0.23
CLCN1-201ENST00000343257 PDE4DQ08499 809 aa16.46■□□□□ 0.23
CLCN1-201ENST00000343257 ACCSLQ4AC99 568 aa16.46■□□□□ 0.23
CLCN1-201ENST00000343257 LRCH2Q5VUJ6 765 aa16.46■□□□□ 0.23
CLCN1-201ENST00000343257 ENAHQ8N8S7 591 aaPredicted RBP16.46■□□□□ 0.23
CLCN1-201ENST00000343257 SPATA5Q8NB90 893 aa16.46■□□□□ 0.23
CLCN1-201ENST00000343257 GOLPH3Q9H4A6 298 aa16.46■□□□□ 0.23
CLCN1-201ENST00000343257 ABCF2Q9UG63 623 aa16.46■□□□□ 0.23
CLCN1-201ENST00000343257 LRRC53A6NM62 1247 aa16.46■□□□□ 0.22
CLCN1-201ENST00000343257 STK4Q13043 487 aa16.46■□□□□ 0.22
CLCN1-201ENST00000343257 RASGRF1Q13972 1273 aa16.46■□□□□ 0.22
CLCN1-201ENST00000343257 NPY5RQ15761 445 aa16.46■□□□□ 0.22
CLCN1-201ENST00000343257 CFAP221Q4G0U5 840 aa16.46■□□□□ 0.22
CLCN1-201ENST00000343257 THAP9Q9H5L6 903 aa16.46■□□□□ 0.22
CLCN1-201ENST00000343257 UBA7P41226 1012 aa16.45■□□□□ 0.22
CLCN1-201ENST00000343257 ITGB3BPQ13352 177 aaPredicted RBP16.45■□□□□ 0.22
CLCN1-201ENST00000343257 KLHDC7AQ5VTJ3 777 aa16.45■□□□□ 0.22
CLCN1-201ENST00000343257 CATIPQ7Z7H3 387 aa16.45■□□□□ 0.22
CLCN1-201ENST00000343257 SPATS2Q86XZ4 545 aaKnown RBP16.45■□□□□ 0.22
CLCN1-201ENST00000343257 ZNF622Q969S3 477 aaKnown RBP eCLIP16.45■□□□□ 0.22
CLCN1-201ENST00000343257 TANGO6Q9C0B7 1094 aa16.45■□□□□ 0.22
CLCN1-201ENST00000343257 LRP2BPQ9P2M1 347 aa16.45■□□□□ 0.22
CLCN1-201ENST00000343257 ANKRD18BA2A2Z9 1011 aa16.45■□□□□ 0.22
CLCN1-201ENST00000343257 EZRP15311 586 aaKnown RBP16.45■□□□□ 0.22
CLCN1-201ENST00000343257 NAALADL2Q58DX5 795 aa16.45■□□□□ 0.22
CLCN1-201ENST00000343257 STAG1Q8WVM7 1258 aa16.45■□□□□ 0.22
CLCN1-201ENST00000343257 SLC39A2Q9NP94 309 aa16.45■□□□□ 0.22
CLCN1-201ENST00000343257 A1CFQ9NQ94 594 aaKnown RBP16.45■□□□□ 0.22
CLCN1-201ENST00000343257 KCNG1Q9UIX4 513 aa16.45■□□□□ 0.22
CLCN1-201ENST00000343257 EIF4E1BA6NMX2 242 aaKnown RBP16.44■□□□□ 0.22
CLCN1-201ENST00000343257 PALMO75781 387 aa16.44■□□□□ 0.22
CLCN1-201ENST00000343257 ASIC1P78348 528 aa16.44■□□□□ 0.22
CLCN1-201ENST00000343257 LRRC15Q8TF66 581 aa16.44■□□□□ 0.22
CLCN1-201ENST00000343257 UBLCP1Q8WVY7 318 aaPredicted RBP16.44■□□□□ 0.22
CLCN1-201ENST00000343257 LPIN2Q92539 896 aa16.44■□□□□ 0.22
CLCN1-201ENST00000343257 NUP58Q9BVL2 599 aa16.44■□□□□ 0.22
CLCN1-201ENST00000343257 DISC1Q9NRI5 854 aa16.44■□□□□ 0.22
CLCN1-201ENST00000343257 ARFGEF2Q9Y6D5 1785 aa16.44■□□□□ 0.22
CLCN1-201ENST00000343257 GMNCA6NCL1 334 aa16.44■□□□□ 0.22
CLCN1-201ENST00000343257 DCDC2CA8MYV0 355 aa16.44■□□□□ 0.22
CLCN1-201ENST00000343257 RAD51CO43502 376 aa16.44■□□□□ 0.22
CLCN1-201ENST00000343257 BMP15O95972 392 aa16.44■□□□□ 0.22
CLCN1-201ENST00000343257 GCFC2P16383 781 aaKnown RBP16.44■□□□□ 0.22
CLCN1-201ENST00000343257 KRT28Q7Z3Y7 464 aa16.44■□□□□ 0.22
CLCN1-201ENST00000343257 TMTC2Q8N394 836 aa16.44■□□□□ 0.22
CLCN1-201ENST00000343257 MDM1Q8TC05 714 aa16.44■□□□□ 0.22
CLCN1-201ENST00000343257 THOC1Q96FV9 657 aaKnown RBP16.44■□□□□ 0.22
CLCN1-201ENST00000343257 TMEM60Q9H2L4 133 aa16.44■□□□□ 0.22
CLCN1-201ENST00000343257 LEMD3Q9Y2U8 911 aa16.44■□□□□ 0.22
CLCN1-201ENST00000343257 PDE8BO95263 885 aa16.44■□□□□ 0.22
CLCN1-201ENST00000343257 ALX1Q15699 326 aa16.44■□□□□ 0.22
CLCN1-201ENST00000343257 MIIPQ5JXC2 388 aa16.44■□□□□ 0.22
CLCN1-201ENST00000343257 SRBD1Q8N5C6 995 aaKnown RBP16.44■□□□□ 0.22
CLCN1-201ENST00000343257 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.44■□□□□ 0.22
CLCN1-201ENST00000343257 NOVA2Q9UNW9 492 aaKnown RBP16.44■□□□□ 0.22
CLCN1-201ENST00000343257 MEGF6O75095 1541 aa16.43■□□□□ 0.22
CLCN1-201ENST00000343257 ARHGAP23Q9P227 1491 aa16.43■□□□□ 0.22
CLCN1-201ENST00000343257 PRPF3O43395 683 aaKnown RBP16.43■□□□□ 0.22
CLCN1-201ENST00000343257 C21orf2O43822 256 aa16.43■□□□□ 0.22
CLCN1-201ENST00000343257 KLRC4O43908 158 aa16.43■□□□□ 0.22
CLCN1-201ENST00000343257 BCAMP50895 628 aa16.43■□□□□ 0.22
CLCN1-201ENST00000343257 FAM47AQ5JRC9 791 aa16.43■□□□□ 0.22
CLCN1-201ENST00000343257 CACNA2D4Q7Z3S7 1137 aa16.43■□□□□ 0.22
CLCN1-201ENST00000343257 CPLX4Q7Z7G2 160 aa16.43■□□□□ 0.22
CLCN1-201ENST00000343257 THEMISQ8N1K5 641 aaPredicted RBP16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms