RNA–Protein interactions for RNA: ENST00000343106.9

UBE2D3-203, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS P4 TSL 2 BASIC

Gene UBE2D3, Length 2,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-203ENST00000343106 PSMB7Q99436 277 aa11.05□□□□□ -0.64
UBE2D3-203ENST00000343106 MMTAG2Q9BU76 263 aaKnown RBP11.05□□□□□ -0.64
UBE2D3-203ENST00000343106 RTFDC1Q9BY42 306 aaPredicted RBP11.05□□□□□ -0.64
UBE2D3-203ENST00000343106 SEMA6BQ9H3T3 888 aa11.05□□□□□ -0.64
UBE2D3-203ENST00000343106 HAUS4Q9H6D7 363 aa11.05□□□□□ -0.64
UBE2D3-203ENST00000343106 GPCPD1Q9NPB8 672 aa11.05□□□□□ -0.64
UBE2D3-203ENST00000343106 CALCOCO1Q9P1Z2 691 aa11.05□□□□□ -0.64
UBE2D3-203ENST00000343106 FAN1Q9Y2M0 1017 aa11.05□□□□□ -0.64
UBE2D3-203ENST00000343106 CNTNAP4Q9C0A0 1308 aa11.04□□□□□ -0.64
UBE2D3-203ENST00000343106 LRRIQ3A6PVS8 624 aaPredicted RBP11.04□□□□□ -0.64
UBE2D3-203ENST00000343106 LAD1O00515 517 aa11.04□□□□□ -0.64
UBE2D3-203ENST00000343106 KRT86O43790 486 aa11.04□□□□□ -0.64
UBE2D3-203ENST00000343106 LDHCP07864 332 aa11.04□□□□□ -0.64
UBE2D3-203ENST00000343106 CCDC96Q2M329 555 aa11.04□□□□□ -0.64
UBE2D3-203ENST00000343106 TAF3Q5VWG9 929 aa11.04□□□□□ -0.64
UBE2D3-203ENST00000343106 TRAPPC11Q7Z392 1133 aa11.04□□□□□ -0.64
UBE2D3-203ENST00000343106 REXO1Q8N1G1 1221 aaKnown RBP11.04□□□□□ -0.64
UBE2D3-203ENST00000343106 KIAA0895Q8NCT3 520 aa11.04□□□□□ -0.64
UBE2D3-203ENST00000343106 CALML4Q96GE6 196 aa11.04□□□□□ -0.64
UBE2D3-203ENST00000343106 CCDC42Q96M95 316 aa11.04□□□□□ -0.64
UBE2D3-203ENST00000343106 MMRN2Q9H8L6 949 aa11.04□□□□□ -0.64
UBE2D3-203ENST00000343106 LRWD1Q9UFC0 647 aa11.04□□□□□ -0.64
UBE2D3-203ENST00000343106 IRS2Q9Y4H2 1338 aa11.04□□□□□ -0.64
UBE2D3-203ENST00000343106 BICDL2A1A5D9 508 aa11.04□□□□□ -0.64
UBE2D3-203ENST00000343106 POTEMA6NI47 508 aa11.04□□□□□ -0.64
UBE2D3-203ENST00000343106 MYMKA6NI61 221 aa11.04□□□□□ -0.64
UBE2D3-203ENST00000343106 PSMD14O00487 310 aa11.04□□□□□ -0.64
UBE2D3-203ENST00000343106 EPHB6O15197 1021 aa11.04□□□□□ -0.64
UBE2D3-203ENST00000343106 RAD21O60216 631 aa11.04□□□□□ -0.64
UBE2D3-203ENST00000343106 TDP2O95551 362 aa11.04□□□□□ -0.64
UBE2D3-203ENST00000343106 CYLC1P35663 651 aaPredicted RBP11.04□□□□□ -0.64
UBE2D3-203ENST00000343106 PRPHP41219 470 aa11.04□□□□□ -0.64
UBE2D3-203ENST00000343106 MIIPQ5JXC2 388 aa11.04□□□□□ -0.64
UBE2D3-203ENST00000343106 SV2BQ7L1I2 683 aa11.04□□□□□ -0.64
UBE2D3-203ENST00000343106 C2CD5Q86YS7 1000 aa11.04□□□□□ -0.64
UBE2D3-203ENST00000343106 GSPT2Q8IYD1 628 aaKnown RBP11.04□□□□□ -0.64
UBE2D3-203ENST00000343106 CNBD1Q8NA66 436 aa11.04□□□□□ -0.64
UBE2D3-203ENST00000343106 CDK5RAP3Q96JB5 506 aa11.04□□□□□ -0.64
UBE2D3-203ENST00000343106 AK8Q96MA6 479 aa11.04□□□□□ -0.64
UBE2D3-203ENST00000343106 LEMD3Q9Y2U8 911 aa11.04□□□□□ -0.64
UBE2D3-203ENST00000343106 SLC37A4O43826 429 aa11.03□□□□□ -0.64
UBE2D3-203ENST00000343106 MYL1P05976 194 aa11.03□□□□□ -0.64
UBE2D3-203ENST00000343106 PPP4CP60510 307 aa11.03□□□□□ -0.64
UBE2D3-203ENST00000343106 ZBED6P86452 979 aa11.03□□□□□ -0.64
UBE2D3-203ENST00000343106 AMPD3Q01432 767 aa11.03□□□□□ -0.64
UBE2D3-203ENST00000343106 CALCRLQ16602 461 aa11.03□□□□□ -0.64
UBE2D3-203ENST00000343106 MFSD14BQ5SR56 506 aa11.03□□□□□ -0.64
UBE2D3-203ENST00000343106 FKBP15Q5T1M5 1219 aa11.03□□□□□ -0.64
UBE2D3-203ENST00000343106 TRAPPC3LQ5T215 181 aa11.03□□□□□ -0.64
UBE2D3-203ENST00000343106 TXLNBQ8N3L3 684 aa11.03□□□□□ -0.64
UBE2D3-203ENST00000343106 CCDC155Q8N6L0 562 aa11.03□□□□□ -0.64
UBE2D3-203ENST00000343106 ANKRD13CQ8N6S4 541 aa11.03□□□□□ -0.64
UBE2D3-203ENST00000343106 GLIS3Q8NEA6 775 aa11.03□□□□□ -0.64
UBE2D3-203ENST00000343106 RPGRQ92834 1020 aaKnown RBP11.03□□□□□ -0.64
UBE2D3-203ENST00000343106 C7orf25Q9BPX7 421 aa11.03□□□□□ -0.64
UBE2D3-203ENST00000343106 NUDT12Q9BQG2 462 aa11.03□□□□□ -0.64
UBE2D3-203ENST00000343106 LZTS2Q9BRK4 669 aa11.03□□□□□ -0.64
UBE2D3-203ENST00000343106 TTYH3Q9C0H2 523 aa11.03□□□□□ -0.64
UBE2D3-203ENST00000343106 ZNF287Q9HBT7 754 aa11.03□□□□□ -0.64
UBE2D3-203ENST00000343106 CD209Q9NNX6 404 aa11.03□□□□□ -0.64
UBE2D3-203ENST00000343106 EIF3JO75822 258 aaKnown RBP11.03□□□□□ -0.64
UBE2D3-203ENST00000343106 SSBP05455 408 aaKnown RBP eCLIP11.03□□□□□ -0.64
UBE2D3-203ENST00000343106 SLURP2P0DP57 97 aa11.03□□□□□ -0.64
UBE2D3-203ENST00000343106 MATR3P43243 847 aaKnown RBP eCLIP11.03□□□□□ -0.64
UBE2D3-203ENST00000343106 TNNI2P48788 182 aa11.03□□□□□ -0.64
UBE2D3-203ENST00000343106 FAM193AP78312 1265 aa11.03□□□□□ -0.64
UBE2D3-203ENST00000343106 GRB10Q13322 594 aa11.03□□□□□ -0.64
UBE2D3-203ENST00000343106 UBE2SQ16763 222 aa11.03□□□□□ -0.64
UBE2D3-203ENST00000343106 SKIDA1Q1XH10 827 aa11.03□□□□□ -0.64
UBE2D3-203ENST00000343106 HSP90B2PQ58FF3 399 aa11.03□□□□□ -0.64
UBE2D3-203ENST00000343106 TMED8Q6PL24 325 aaPredicted RBP11.03□□□□□ -0.64
UBE2D3-203ENST00000343106 C16orf86Q6ZW13 317 aa11.03□□□□□ -0.64
UBE2D3-203ENST00000343106 SPZ1Q9BXG8 430 aa11.03□□□□□ -0.64
UBE2D3-203ENST00000343106 COL16A1Q07092 1604 aaPredicted RBP11.02□□□□□ -0.64
UBE2D3-203ENST00000343106 C6orf229H3BNL8 230 aa11.02□□□□□ -0.65
UBE2D3-203ENST00000343106 PDE2AO00408 941 aaPredicted RBP11.02□□□□□ -0.65
UBE2D3-203ENST00000343106 ZNF263O14978 683 aa11.02□□□□□ -0.65
UBE2D3-203ENST00000343106 RIMBP2O15034 1052 aa11.02□□□□□ -0.65
UBE2D3-203ENST00000343106 MARCH6O60337 910 aa11.02□□□□□ -0.65
UBE2D3-203ENST00000343106 CXCR5P32302 372 aa11.02□□□□□ -0.65
UBE2D3-203ENST00000343106 KIF5AQ12840 1032 aa11.02□□□□□ -0.65
UBE2D3-203ENST00000343106 SPA17Q15506 151 aa11.02□□□□□ -0.65
UBE2D3-203ENST00000343106 MEA1Q16626 185 aa11.02□□□□□ -0.65
UBE2D3-203ENST00000343106 ZSCAN26Q16670 478 aa11.02□□□□□ -0.65
UBE2D3-203ENST00000343106 CNNM4Q6P4Q7 775 aa11.02□□□□□ -0.65
UBE2D3-203ENST00000343106 FAM196AQ6ZSG2 479 aa11.02□□□□□ -0.65
UBE2D3-203ENST00000343106 FAM114A1Q8IWE2 563 aa11.02□□□□□ -0.65
UBE2D3-203ENST00000343106 NEDD1Q8NHV4 660 aa11.02□□□□□ -0.65
UBE2D3-203ENST00000343106 NOC3LQ8WTT2 800 aaKnown RBP11.02□□□□□ -0.65
UBE2D3-203ENST00000343106 NUP58Q9BVL2 599 aa11.02□□□□□ -0.65
UBE2D3-203ENST00000343106 TANGO6Q9C0B7 1094 aa11.02□□□□□ -0.65
UBE2D3-203ENST00000343106 CUEDC2Q9H467 287 aa11.02□□□□□ -0.65
UBE2D3-203ENST00000343106 DEF6Q9H4E7 631 aa11.02□□□□□ -0.65
UBE2D3-203ENST00000343106 MLXIPQ9HAP2 919 aa11.02□□□□□ -0.65
UBE2D3-203ENST00000343106 TBC1D7Q9P0N9 293 aa11.02□□□□□ -0.65
UBE2D3-203ENST00000343106 CAPN2P17655 700 aa11.02□□□□□ -0.65
UBE2D3-203ENST00000343106 SLC16A2P36021 539 aa11.02□□□□□ -0.65
UBE2D3-203ENST00000343106 USP14P54578 494 aa11.02□□□□□ -0.65
UBE2D3-203ENST00000343106 C2orf54Q08AI8 447 aa11.02□□□□□ -0.65
UBE2D3-203ENST00000343106 RAD51AP2Q09MP3 1159 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms