RNA–Protein interactions for RNA: ENST00000342784.6

SYDE1-201, Transcript of synapse defective Rho GTPase homolog 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SYDE1, Length 3,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE1-201ENST00000342784 METTL22Q9BUU2 404 aaPredicted RBP15.15■□□□□ 0.02
SYDE1-201ENST00000342784 BLOC1S6Q9UL45 172 aa15.15■□□□□ 0.02
SYDE1-201ENST00000342784 PLAAQ9Y263 795 aa15.15■□□□□ 0.02
SYDE1-201ENST00000342784 ATP6V1G2O95670 118 aa15.15■□□□□ 0.02
SYDE1-201ENST00000342784 FAM153BP0C7A2 387 aa15.15■□□□□ 0.02
SYDE1-201ENST00000342784 ITIH3Q06033 890 aa15.15■□□□□ 0.02
SYDE1-201ENST00000342784 FAM153CQ494X1 144 aa15.15■□□□□ 0.02
SYDE1-201ENST00000342784 AKAP4Q5JQC9 854 aa15.15■□□□□ 0.02
SYDE1-201ENST00000342784 CCDC170Q8IYT3 715 aa15.15■□□□□ 0.02
SYDE1-201ENST00000342784 IFIH1Q9BYX4 1025 aaKnown RBP15.15■□□□□ 0.02
SYDE1-201ENST00000342784 TSPYL2Q9H2G4 693 aaPredicted RBP15.15■□□□□ 0.02
SYDE1-201ENST00000342784 FAM153AQ9UHL3 310 aa15.15■□□□□ 0.02
SYDE1-201ENST00000342784 CAPN11Q9UMQ6 739 aa15.15■□□□□ 0.02
SYDE1-201ENST00000342784 NFAT5O94916 1531 aa15.15■□□□□ 0.02
SYDE1-201ENST00000342784 IFIT3O14879 490 aaKnown RBP15.14■□□□□ 0.01
SYDE1-201ENST00000342784 RAB27AP51159 221 aa15.14■□□□□ 0.01
SYDE1-201ENST00000342784 WDR59Q6PJI9 974 aa15.14■□□□□ 0.01
SYDE1-201ENST00000342784 NCAPG2Q86XI2 1143 aa15.14■□□□□ 0.01
SYDE1-201ENST00000342784 CCDC63Q8NA47 563 aa15.14■□□□□ 0.01
SYDE1-201ENST00000342784 SPDYE1Q8NFV5 336 aaPredicted RBP15.14■□□□□ 0.01
SYDE1-201ENST00000342784 ZNF594Q96JF6 807 aaPredicted RBP15.14■□□□□ 0.01
SYDE1-201ENST00000342784 MLXIPQ9HAP2 919 aa15.14■□□□□ 0.01
SYDE1-201ENST00000342784 RBM12Q9NTZ6 932 aaKnown RBP15.14■□□□□ 0.01
SYDE1-201ENST00000342784 DENND2AQ9ULE3 1009 aa15.14■□□□□ 0.01
SYDE1-201ENST00000342784 MED1Q15648 1581 aaPredicted RBP15.14■□□□□ 0.01
SYDE1-201ENST00000342784 GPAA1O43292 621 aa15.14■□□□□ 0.01
SYDE1-201ENST00000342784 SETDB1Q15047 1291 aa15.14■□□□□ 0.01
SYDE1-201ENST00000342784 ZRSR2Q15696 482 aaKnown RBP15.14■□□□□ 0.01
SYDE1-201ENST00000342784 MAB21L3Q8N8X9 362 aa15.14■□□□□ 0.01
SYDE1-201ENST00000342784 TRIM47Q96LD4 638 aa15.14■□□□□ 0.01
SYDE1-201ENST00000342784 YIPF3Q9GZM5 350 aa15.14■□□□□ 0.01
SYDE1-201ENST00000342784 FOXP1Q9H334 677 aaPredicted RBP15.14■□□□□ 0.01
SYDE1-201ENST00000342784 AATFQ9NY61 560 aaKnown RBP eCLIP15.14■□□□□ 0.01
SYDE1-201ENST00000342784 A0A087X0B3 334 aa15.14■□□□□ 0.01
SYDE1-201ENST00000342784 LGALS16A8MUM7 142 aa15.14■□□□□ 0.01
SYDE1-201ENST00000342784 PYGBP11216 843 aa15.14■□□□□ 0.01
SYDE1-201ENST00000342784 SPRED3Q2MJR0 410 aa15.14■□□□□ 0.01
SYDE1-201ENST00000342784 CFAP221Q4G0U5 840 aa15.14■□□□□ 0.01
SYDE1-201ENST00000342784 CYB5R4Q7L1T6 521 aa15.14■□□□□ 0.01
SYDE1-201ENST00000342784 SENP2Q9HC62 589 aa15.14■□□□□ 0.01
SYDE1-201ENST00000342784 LEMD3Q9Y2U8 911 aa15.14■□□□□ 0.01
SYDE1-201ENST00000342784 CAPN6Q9Y6Q1 641 aa15.14■□□□□ 0.01
SYDE1-201ENST00000342784 WDR19Q8NEZ3 1342 aa15.13■□□□□ 0.01
SYDE1-201ENST00000342784 AKR1B10O60218 316 aa15.13■□□□□ 0.01
SYDE1-201ENST00000342784 SF3A3Q12874 501 aaKnown RBP eCLIP15.13■□□□□ 0.01
SYDE1-201ENST00000342784 ITGB3BPQ13352 177 aaPredicted RBP15.13■□□□□ 0.01
SYDE1-201ENST00000342784 XRCC4Q13426 336 aa15.13■□□□□ 0.01
SYDE1-201ENST00000342784 ANKRD13DQ6ZTN6 518 aa15.13■□□□□ 0.01
SYDE1-201ENST00000342784 KRT26Q7Z3Y9 468 aa15.13■□□□□ 0.01
SYDE1-201ENST00000342784 YIPF2Q9BWQ6 316 aa15.13■□□□□ 0.01
SYDE1-201ENST00000342784 ZBTB3Q9H5J0 574 aa15.13■□□□□ 0.01
SYDE1-201ENST00000342784 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.13■□□□□ 0.01
SYDE1-201ENST00000342784 TRPC6Q9Y210 931 aa15.13■□□□□ 0.01
SYDE1-201ENST00000342784 SRRM3A6NNA2 597 aaPredicted RBP15.13■□□□□ 0.01
SYDE1-201ENST00000342784 H7C1D1 291 aa15.13■□□□□ 0.01
SYDE1-201ENST00000342784 TMOD1P28289 359 aa15.13■□□□□ 0.01
SYDE1-201ENST00000342784 APPBP2Q92624 585 aa15.13■□□□□ 0.01
SYDE1-201ENST00000342784 P3H4Q92791 437 aa15.13■□□□□ 0.01
SYDE1-201ENST00000342784 AGPAT5Q9NUQ2 364 aa15.13■□□□□ 0.01
SYDE1-201ENST00000342784 RNMTO43148 476 aaKnown RBP15.12■□□□□ 0.01
SYDE1-201ENST00000342784 NCK2O43639 380 aa15.12■□□□□ 0.01
SYDE1-201ENST00000342784 GUCY1A2P33402 732 aa15.12■□□□□ 0.01
SYDE1-201ENST00000342784 ELF3P78545 371 aaPredicted RBP15.12■□□□□ 0.01
SYDE1-201ENST00000342784 ZNF662Q6ZS27 426 aa15.12■□□□□ 0.01
SYDE1-201ENST00000342784 ARMC9Q7Z3E5 817 aa15.12■□□□□ 0.01
SYDE1-201ENST00000342784 TMEM87BQ96K49 555 aa15.12■□□□□ 0.01
SYDE1-201ENST00000342784 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.12■□□□□ 0.01
SYDE1-201ENST00000342784 MARF1Q9Y4F3 1742 aaKnown RBP15.12■□□□□ 0.01
SYDE1-201ENST00000342784 TRPM3Q9HCF6 1732 aaPredicted RBP15.12■□□□□ 0.01
SYDE1-201ENST00000342784 ZSCAN5CA6NGD5 496 aaPredicted RBP15.12■□□□□ 0.01
SYDE1-201ENST00000342784 GLI1P08151 1106 aa15.12■□□□□ 0.01
SYDE1-201ENST00000342784 QPCTQ16769 361 aa15.12■□□□□ 0.01
SYDE1-201ENST00000342784 AMOTQ4VCS5 1084 aa15.12■□□□□ 0.01
SYDE1-201ENST00000342784 ANKS4BQ8N8V4 417 aa15.12■□□□□ 0.01
SYDE1-201ENST00000342784 WHAMMQ8TF30 809 aa15.12■□□□□ 0.01
SYDE1-201ENST00000342784 RMND1Q9NWS8 449 aa15.12■□□□□ 0.01
SYDE1-201ENST00000342784 TBC1D2BQ9UPU7 963 aa15.12■□□□□ 0.01
SYDE1-201ENST00000342784 RGPD2P0DJD1 1756 aa15.12■□□□□ 0.01
SYDE1-201ENST00000342784 RGPD5Q99666 1765 aa15.12■□□□□ 0.01
SYDE1-201ENST00000342784 B4DLN1 442 aa15.12■□□□□ 0.01
SYDE1-201ENST00000342784 MGRN1O60291 552 aa15.12■□□□□ 0.01
SYDE1-201ENST00000342784 ZPR1O75312 459 aa15.12■□□□□ 0.01
SYDE1-201ENST00000342784 CAPN15O75808 1086 aa15.12■□□□□ 0.01
SYDE1-201ENST00000342784 FMNL1O95466 1100 aaPredicted RBP15.12■□□□□ 0.01
SYDE1-201ENST00000342784 ANP32DO95626 131 aa15.12■□□□□ 0.01
SYDE1-201ENST00000342784 NEFHP12036 1026 aa15.12■□□□□ 0.01
SYDE1-201ENST00000342784 IL15P40933 162 aaPredicted RBP15.12■□□□□ 0.01
SYDE1-201ENST00000342784 CD151P48509 253 aa15.12■□□□□ 0.01
SYDE1-201ENST00000342784 DNM2P50570 870 aa15.12■□□□□ 0.01
SYDE1-201ENST00000342784 RUFY4Q6ZNE9 571 aa15.12■□□□□ 0.01
SYDE1-201ENST00000342784 PUS7LQ9H0K6 701 aaKnown RBP15.12■□□□□ 0.01
SYDE1-201ENST00000342784 A0A1W2PQC6 194 aa15.11■□□□□ 0.01
SYDE1-201ENST00000342784 CDC25CP30307 473 aa15.11■□□□□ 0.01
SYDE1-201ENST00000342784 NTRK3Q16288 839 aa15.11■□□□□ 0.01
SYDE1-201ENST00000342784 BZW1Q7L1Q6 419 aaKnown RBP15.11■□□□□ 0.01
SYDE1-201ENST00000342784 TAX1BP1Q86VP1 789 aa15.11■□□□□ 0.01
SYDE1-201ENST00000342784 ANKRD13CQ8N6S4 541 aa15.11■□□□□ 0.01
SYDE1-201ENST00000342784 NUP133Q8WUM0 1156 aa15.11■□□□□ 0.01
SYDE1-201ENST00000342784 NUP58Q9BVL2 599 aa15.11■□□□□ 0.01
SYDE1-201ENST00000342784 NOP53Q9NZM5 478 aaKnown RBP15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms