RNA–Protein interactions for RNA: ENST00000342287.9

PBX3-201, Transcript of PBX homeobox 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene PBX3, Length 2,755 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-201ENST00000342287 BIRC2Q13490 618 aa16.54■□□□□ 0.24
PBX3-201ENST00000342287 RESP18Q5W5W9 173 aa16.54■□□□□ 0.24
PBX3-201ENST00000342287 MCTP2Q6DN12 878 aa16.54■□□□□ 0.24
PBX3-201ENST00000342287 SHC4Q6S5L8 630 aa16.54■□□□□ 0.24
PBX3-201ENST00000342287 CKAP2LQ8IYA6 745 aa16.54■□□□□ 0.24
PBX3-201ENST00000342287 CALR3Q96L12 384 aaKnown RBP16.54■□□□□ 0.24
PBX3-201ENST00000342287 ARHGEF10LQ9HCE6 1279 aa16.54■□□□□ 0.24
PBX3-201ENST00000342287 FBXO2Q9UK22 296 aaPredicted RBP16.54■□□□□ 0.24
PBX3-201ENST00000342287 ZBTB21Q9ULJ3 1066 aa16.54■□□□□ 0.24
PBX3-201ENST00000342287 MYH4Q9Y623 1939 aa16.54■□□□□ 0.24
PBX3-201ENST00000342287 ESYT2A0FGR8 921 aa16.54■□□□□ 0.24
PBX3-201ENST00000342287 ANKRD65E5RJM6 399 aa16.54■□□□□ 0.24
PBX3-201ENST00000342287 PFKFB1P16118 471 aa16.54■□□□□ 0.24
PBX3-201ENST00000342287 SLC16A2P36021 539 aa16.54■□□□□ 0.24
PBX3-201ENST00000342287 KIF4BQ2VIQ3 1234 aa16.54■□□□□ 0.24
PBX3-201ENST00000342287 FAM237AA0A1B0GTK4 181 aa16.53■□□□□ 0.24
PBX3-201ENST00000342287 ZNF202O95125 648 aa16.53■□□□□ 0.24
PBX3-201ENST00000342287 OAS2P29728 719 aaKnown RBP16.53■□□□□ 0.24
PBX3-201ENST00000342287 CAP2P40123 477 aa16.53■□□□□ 0.24
PBX3-201ENST00000342287 ZNF174Q15697 407 aa16.53■□□□□ 0.24
PBX3-201ENST00000342287 GPC2Q8N158 579 aa16.53■□□□□ 0.24
PBX3-201ENST00000342287 ZNF579Q8NAF0 562 aaKnown RBP16.53■□□□□ 0.24
PBX3-201ENST00000342287 MTMR8Q96EF0 704 aa16.53■□□□□ 0.24
PBX3-201ENST00000342287 HACL1Q9UJ83 578 aa16.53■□□□□ 0.24
PBX3-201ENST00000342287 USP27XA6NNY8 438 aa16.53■□□□□ 0.24
PBX3-201ENST00000342287 ZBTB5O15062 677 aa16.53■□□□□ 0.24
PBX3-201ENST00000342287 RPAINQ86UA6 219 aa16.53■□□□□ 0.24
PBX3-201ENST00000342287 RASGRP4Q8TDF6 673 aa16.53■□□□□ 0.24
PBX3-201ENST00000342287 SDF4Q9BRK5 362 aa16.53■□□□□ 0.24
PBX3-201ENST00000342287 SYT17Q9BSW7 474 aa16.53■□□□□ 0.24
PBX3-201ENST00000342287 HPSEQ9Y251 543 aa16.53■□□□□ 0.24
PBX3-201ENST00000342287 A0A1W2PRG0 241 aa16.52■□□□□ 0.24
PBX3-201ENST00000342287 USP17L10C9JJH3 530 aa16.52■□□□□ 0.24
PBX3-201ENST00000342287 NDUFB10O96000 172 aa16.52■□□□□ 0.24
PBX3-201ENST00000342287 TMCO3Q6UWJ1 677 aa16.52■□□□□ 0.24
PBX3-201ENST00000342287 TEPSINQ96N21 525 aa16.52■□□□□ 0.24
PBX3-201ENST00000342287 COA7Q96BR5 231 aa16.52■□□□□ 0.23
PBX3-201ENST00000342287 SCAF8Q9UPN6 1271 aaKnown RBP16.52■□□□□ 0.23
PBX3-201ENST00000342287 TMX2Q9Y320 296 aa16.52■□□□□ 0.23
PBX3-201ENST00000342287 EIF3CLB5ME19 914 aaKnown RBP16.51■□□□□ 0.23
PBX3-201ENST00000342287 WNT7AO00755 349 aa16.51■□□□□ 0.23
PBX3-201ENST00000342287 BMP3P12645 472 aa16.51■□□□□ 0.23
PBX3-201ENST00000342287 SYKP43405 635 aa16.51■□□□□ 0.23
PBX3-201ENST00000342287 PPP1R18Q6NYC8 613 aa16.51■□□□□ 0.23
PBX3-201ENST00000342287 KRT25Q7Z3Z0 450 aa16.51■□□□□ 0.23
PBX3-201ENST00000342287 FERMT2Q96AC1 680 aa16.51■□□□□ 0.23
PBX3-201ENST00000342287 EIF3CQ99613 913 aaKnown RBP16.51■□□□□ 0.23
PBX3-201ENST00000342287 TYRO3Q06418 890 aa16.51■□□□□ 0.23
PBX3-201ENST00000342287 ARHGAP29Q52LW3 1261 aa16.51■□□□□ 0.23
PBX3-201ENST00000342287 DEFB129Q9H1M3 183 aa16.51■□□□□ 0.23
PBX3-201ENST00000342287 GOPCQ9HD26 462 aa16.51■□□□□ 0.23
PBX3-201ENST00000342287 TRMT1Q9NXH9 659 aaKnown RBP16.51■□□□□ 0.23
PBX3-201ENST00000342287 GPRC5DQ9NZD1 345 aa16.51■□□□□ 0.23
PBX3-201ENST00000342287 ASTN2O75129 1339 aaPredicted RBP16.5■□□□□ 0.23
PBX3-201ENST00000342287 ASNSP08243 561 aa16.5■□□□□ 0.23
PBX3-201ENST00000342287 ATP2C1P98194 919 aaPredicted RBP16.5■□□□□ 0.23
PBX3-201ENST00000342287 PTGDRQ13258 359 aa16.5■□□□□ 0.23
PBX3-201ENST00000342287 SWT1Q5T5J6 900 aaKnown RBP16.5■□□□□ 0.23
PBX3-201ENST00000342287 MCM7P33993 719 aa16.5■□□□□ 0.23
PBX3-201ENST00000342287 ECE1P42892 770 aa16.5■□□□□ 0.23
PBX3-201ENST00000342287 REXO1Q8N1G1 1221 aaKnown RBP16.5■□□□□ 0.23
PBX3-201ENST00000342287 CACTINQ8WUQ7 758 aaKnown RBP16.5■□□□□ 0.23
PBX3-201ENST00000342287 PPM1EQ8WY54 764 aa16.5■□□□□ 0.23
PBX3-201ENST00000342287 SH2D4AQ9H788 454 aa16.5■□□□□ 0.23
PBX3-201ENST00000342287 KCNH3Q9ULD8 1083 aa16.5■□□□□ 0.23
PBX3-201ENST00000342287 PHF20L1A8MW92 1017 aa16.49■□□□□ 0.23
PBX3-201ENST00000342287 PPP1R12AO14974 1030 aaPredicted RBP16.49■□□□□ 0.23
PBX3-201ENST00000342287 PPP1R11O60927 126 aaPredicted RBP16.49■□□□□ 0.23
PBX3-201ENST00000342287 ADCY7P51828 1080 aa16.49■□□□□ 0.23
PBX3-201ENST00000342287 GRIN1Q05586 938 aa16.49■□□□□ 0.23
PBX3-201ENST00000342287 SUGP1Q8IWZ8 645 aaKnown RBP16.49■□□□□ 0.23
PBX3-201ENST00000342287 ACER1Q8TDN7 264 aa16.49■□□□□ 0.23
PBX3-201ENST00000342287 NUP88Q99567 741 aaPredicted RBP16.49■□□□□ 0.23
PBX3-201ENST00000342287 MRVI1Q9Y6F6 885 aa16.49■□□□□ 0.23
PBX3-201ENST00000342287 TMEM232C9JQI7 657 aa16.49■□□□□ 0.23
PBX3-201ENST00000342287 SEC31AO94979 1220 aaKnown RBP16.49■□□□□ 0.23
PBX3-201ENST00000342287 NONOQ15233 471 aaKnown RBP eCLIP16.49■□□□□ 0.23
PBX3-201ENST00000342287 INF2Q27J81 1249 aa16.49■□□□□ 0.23
PBX3-201ENST00000342287 REXO1L1PQ8IX06 675 aa16.49■□□□□ 0.23
PBX3-201ENST00000342287 CSRNP2Q9H175 543 aa16.49■□□□□ 0.23
PBX3-201ENST00000342287 ACTN2P35609 894 aa16.49■□□□□ 0.23
PBX3-201ENST00000342287 IKQ13123 557 aaPredicted RBP16.49■□□□□ 0.23
PBX3-201ENST00000342287 SPECC1Q5M775 1068 aa16.49■□□□□ 0.23
PBX3-201ENST00000342287 BTNL9Q6UXG8 535 aa16.49■□□□□ 0.23
PBX3-201ENST00000342287 LEKR1Q6ZMV7 388 aa16.49■□□□□ 0.23
PBX3-201ENST00000342287 APOBEC3FQ8IUX4 373 aaKnown RBP16.49■□□□□ 0.23
PBX3-201ENST00000342287 LRRN4CLQ8ND94 238 aa16.49■□□□□ 0.23
PBX3-201ENST00000342287 CCDC34Q96HJ3 373 aa16.49■□□□□ 0.23
PBX3-201ENST00000342287 TRIM5Q9C035 493 aa16.49■□□□□ 0.23
PBX3-201ENST00000342287 RIC8AQ9NPQ8 531 aa16.49■□□□□ 0.23
PBX3-201ENST00000342287 QRICH1Q2TAL8 776 aa16.48■□□□□ 0.23
PBX3-201ENST00000342287 MMS22LQ6ZRQ5 1243 aa16.48■□□□□ 0.23
PBX3-201ENST00000342287 SPICE1Q8N0Z3 855 aa16.48■□□□□ 0.23
PBX3-201ENST00000342287 GINM1Q9NU53 330 aa16.48■□□□□ 0.23
PBX3-201ENST00000342287 BIN2Q9UBW5 565 aaPredicted RBP16.48■□□□□ 0.23
PBX3-201ENST00000342287 CDC37Q16543 378 aaPredicted RBP16.48■□□□□ 0.23
PBX3-201ENST00000342287 SYDE2Q5VT97 1194 aa16.48■□□□□ 0.23
PBX3-201ENST00000342287 ANGEL2Q5VTE6 544 aaKnown RBP16.48■□□□□ 0.23
PBX3-201ENST00000342287 ARL6IP4Q66PJ3 421 aaKnown RBP16.48■□□□□ 0.23
PBX3-201ENST00000342287 ARGLU1Q9NWB6 273 aaPredicted RBP16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms