RNA–Protein interactions for RNA: ENST00000342084.8

PTPRR-202, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRR, Length 2,037 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-202ENST00000342084 EYA3Q99504 573 aa8.13□□□□□ -1.11
PTPRR-202ENST00000342084 MMTAG2Q9BU76 263 aaKnown RBP8.13□□□□□ -1.11
PTPRR-202ENST00000342084 RTFDC1Q9BY42 306 aaPredicted RBP8.13□□□□□ -1.11
PTPRR-202ENST00000342084 CCSER1Q9C0I3 900 aa8.13□□□□□ -1.11
PTPRR-202ENST00000342084 SEMA6BQ9H3T3 888 aa8.13□□□□□ -1.11
PTPRR-202ENST00000342084 NHEJ1Q9H9Q4 299 aaPredicted RBP8.13□□□□□ -1.11
PTPRR-202ENST00000342084 ADAM21Q9UKJ8 722 aa8.13□□□□□ -1.11
PTPRR-202ENST00000342084 ROBO3Q96MS0 1386 aa8.13□□□□□ -1.11
PTPRR-202ENST00000342084 A0A1W2PQC6 194 aa8.13□□□□□ -1.11
PTPRR-202ENST00000342084 USP17L5A8MUK1 530 aa8.13□□□□□ -1.11
PTPRR-202ENST00000342084 PSMD14O00487 310 aa8.13□□□□□ -1.11
PTPRR-202ENST00000342084 ZNF263O14978 683 aa8.13□□□□□ -1.11
PTPRR-202ENST00000342084 SLC37A4O43826 429 aa8.13□□□□□ -1.11
PTPRR-202ENST00000342084 RPS6KA4O75676 772 aa8.13□□□□□ -1.11
PTPRR-202ENST00000342084 TDP2O95551 362 aa8.13□□□□□ -1.11
PTPRR-202ENST00000342084 TNNT3P45378 269 aaPredicted RBP8.13□□□□□ -1.11
PTPRR-202ENST00000342084 DNM2P50570 870 aa8.13□□□□□ -1.11
PTPRR-202ENST00000342084 GPSM2P81274 684 aa8.13□□□□□ -1.11
PTPRR-202ENST00000342084 C2orf54Q08AI8 447 aa8.13□□□□□ -1.11
PTPRR-202ENST00000342084 NONOQ15233 471 aaKnown RBP eCLIP8.13□□□□□ -1.11
PTPRR-202ENST00000342084 TSR1Q2NL82 804 aaKnown RBP8.13□□□□□ -1.11
PTPRR-202ENST00000342084 AMOTL1Q8IY63 956 aa8.13□□□□□ -1.11
PTPRR-202ENST00000342084 TEX11Q8IYF3 940 aa8.13□□□□□ -1.11
PTPRR-202ENST00000342084 LRRC47Q8N1G4 583 aaKnown RBP8.13□□□□□ -1.11
PTPRR-202ENST00000342084 HNRNPLLQ8WVV9 542 aaKnown RBP8.13□□□□□ -1.11
PTPRR-202ENST00000342084 ANKS1AQ92625 1134 aa8.13□□□□□ -1.11
PTPRR-202ENST00000342084 CCDC102AQ96A19 550 aa8.13□□□□□ -1.11
PTPRR-202ENST00000342084 NOC4LQ9BVI4 516 aaKnown RBP8.13□□□□□ -1.11
PTPRR-202ENST00000342084 FAM207AQ9NSI2 230 aaPredicted RBP8.13□□□□□ -1.11
PTPRR-202ENST00000342084 TCP11L1Q9NUJ3 509 aa8.13□□□□□ -1.11
PTPRR-202ENST00000342084 SMARCAL1Q9NZC9 954 aa8.13□□□□□ -1.11
PTPRR-202ENST00000342084 MYH1P12882 1939 aa8.13□□□□□ -1.11
PTPRR-202ENST00000342084 COL24A1Q17RW2 1714 aa8.13□□□□□ -1.11
PTPRR-202ENST00000342084 POTEMA6NI47 508 aa8.12□□□□□ -1.11
PTPRR-202ENST00000342084 POTEB2H3BUK9 544 aa8.12□□□□□ -1.11
PTPRR-202ENST00000342084 PDE2AO00408 941 aaPredicted RBP8.12□□□□□ -1.11
PTPRR-202ENST00000342084 ERLIN1O75477 346 aa8.12□□□□□ -1.11
PTPRR-202ENST00000342084 BAG3O95817 575 aa8.12□□□□□ -1.11
PTPRR-202ENST00000342084 SLURP2P0DP57 97 aa8.12□□□□□ -1.11
PTPRR-202ENST00000342084 CCNE1P24864 410 aa8.12□□□□□ -1.11
PTPRR-202ENST00000342084 GNAQP50148 359 aa8.12□□□□□ -1.11
PTPRR-202ENST00000342084 PIP4K2BP78356 416 aa8.12□□□□□ -1.11
PTPRR-202ENST00000342084 GRB10Q13322 594 aa8.12□□□□□ -1.11
PTPRR-202ENST00000342084 LRRC41Q15345 812 aa8.12□□□□□ -1.11
PTPRR-202ENST00000342084 NEK8Q86SG6 692 aa8.12□□□□□ -1.11
PTPRR-202ENST00000342084 CCDC155Q8N6L0 562 aa8.12□□□□□ -1.11
PTPRR-202ENST00000342084 WDR66Q8TBY9 1149 aa8.12□□□□□ -1.11
PTPRR-202ENST00000342084 DHTKD1Q96HY7 919 aaPredicted RBP8.12□□□□□ -1.11
PTPRR-202ENST00000342084 PSMB7Q99436 277 aa8.12□□□□□ -1.11
PTPRR-202ENST00000342084 NUDT12Q9BQG2 462 aa8.12□□□□□ -1.11
PTPRR-202ENST00000342084 ZMYND12Q9H0C1 365 aa8.12□□□□□ -1.11
PTPRR-202ENST00000342084 HAUS4Q9H6D7 363 aa8.12□□□□□ -1.11
PTPRR-202ENST00000342084 MLXIPQ9HAP2 919 aa8.12□□□□□ -1.11
PTPRR-202ENST00000342084 CALCOCO1Q9P1Z2 691 aa8.12□□□□□ -1.11
PTPRR-202ENST00000342084 MYO1AQ9UBC5 1043 aa8.12□□□□□ -1.11
PTPRR-202ENST00000342084 LRWD1Q9UFC0 647 aa8.12□□□□□ -1.11
PTPRR-202ENST00000342084 CCNL1Q9UK58 526 aaPredicted RBP8.12□□□□□ -1.11
PTPRR-202ENST00000342084 MYMKA6NI61 221 aa8.12□□□□□ -1.11
PTPRR-202ENST00000342084 UFL1O94874 794 aa8.12□□□□□ -1.11
PTPRR-202ENST00000342084 MYBL2P10244 700 aa8.12□□□□□ -1.11
PTPRR-202ENST00000342084 USP14P54578 494 aa8.12□□□□□ -1.11
PTPRR-202ENST00000342084 PICALMQ13492 652 aa8.12□□□□□ -1.11
PTPRR-202ENST00000342084 GRAPQ13588 217 aa8.12□□□□□ -1.11
PTPRR-202ENST00000342084 MEA1Q16626 185 aa8.12□□□□□ -1.11
PTPRR-202ENST00000342084 SOGA3Q5TF21 947 aa8.12□□□□□ -1.11
PTPRR-202ENST00000342084 TAF3Q5VWG9 929 aa8.12□□□□□ -1.11
PTPRR-202ENST00000342084 FOXR1Q6PIV2 292 aa8.12□□□□□ -1.11
PTPRR-202ENST00000342084 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.12□□□□□ -1.11
PTPRR-202ENST00000342084 KRT25Q7Z3Z0 450 aa8.12□□□□□ -1.11
PTPRR-202ENST00000342084 KCNK18Q7Z418 384 aa8.12□□□□□ -1.11
PTPRR-202ENST00000342084 TXLNBQ8N3L3 684 aa8.12□□□□□ -1.11
PTPRR-202ENST00000342084 GRAPLQ8TC17 118 aaPredicted RBP8.12□□□□□ -1.11
PTPRR-202ENST00000342084 CAGE1Q8TC20 777 aa8.12□□□□□ -1.11
PTPRR-202ENST00000342084 RIN2Q8WYP3 895 aaPredicted RBP8.12□□□□□ -1.11
PTPRR-202ENST00000342084 RRP36Q96EU6 259 aaKnown RBP8.12□□□□□ -1.11
PTPRR-202ENST00000342084 PNMA5Q96PV4 448 aa8.12□□□□□ -1.11
PTPRR-202ENST00000342084 C7orf25Q9BPX7 421 aa8.12□□□□□ -1.11
PTPRR-202ENST00000342084 C6orf50Q9HD87 102 aa8.12□□□□□ -1.11
PTPRR-202ENST00000342084 GPCPD1Q9NPB8 672 aa8.12□□□□□ -1.11
PTPRR-202ENST00000342084 EHD2Q9NZN4 543 aa8.12□□□□□ -1.11
PTPRR-202ENST00000342084 RTCBQ9Y3I0 505 aaKnown RBP8.12□□□□□ -1.11
PTPRR-202ENST00000342084 SAR1BQ9Y6B6 198 aa8.12□□□□□ -1.11
PTPRR-202ENST00000342084 CAPN6Q9Y6Q1 641 aa8.12□□□□□ -1.11
PTPRR-202ENST00000342084 EDIL3O43854 480 aa8.11□□□□□ -1.11
PTPRR-202ENST00000342084 IDEP14735 1019 aa8.11□□□□□ -1.11
PTPRR-202ENST00000342084 CYLC1P35663 651 aaPredicted RBP8.11□□□□□ -1.11
PTPRR-202ENST00000342084 PRPHP41219 470 aa8.11□□□□□ -1.11
PTPRR-202ENST00000342084 FAM193AP78312 1265 aa8.11□□□□□ -1.11
PTPRR-202ENST00000342084 IRX5P78411 483 aaPredicted RBP8.11□□□□□ -1.11
PTPRR-202ENST00000342084 GSTO1P78417 241 aa8.11□□□□□ -1.11
PTPRR-202ENST00000342084 ZBED6P86452 979 aa8.11□□□□□ -1.11
PTPRR-202ENST00000342084 RAD51AP2Q09MP3 1159 aa8.11□□□□□ -1.11
PTPRR-202ENST00000342084 TUBB2AQ13885 445 aa8.11□□□□□ -1.11
PTPRR-202ENST00000342084 EZH2Q15910 746 aaKnown RBP8.11□□□□□ -1.11
PTPRR-202ENST00000342084 CALCRLQ16602 461 aa8.11□□□□□ -1.11
PTPRR-202ENST00000342084 ECM1Q16610 540 aa8.11□□□□□ -1.11
PTPRR-202ENST00000342084 ZSCAN26Q16670 478 aa8.11□□□□□ -1.11
PTPRR-202ENST00000342084 UBE2SQ16763 222 aa8.11□□□□□ -1.11
PTPRR-202ENST00000342084 CCDC96Q2M329 555 aa8.11□□□□□ -1.11
PTPRR-202ENST00000342084 C16orf86Q6ZW13 317 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms