RNA–Protein interactions for RNA: ENST00000341947.6

COL11A2-201, Transcript of collagen type XI alpha 2 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL11A2, Length 6,425 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-201ENST00000341947 CLNS1AP54105 237 aaKnown RBP16.63■□□□□ 0.25
COL11A2-201ENST00000341947 RUNDC3BQ96NL0 473 aa16.63■□□□□ 0.25
COL11A2-201ENST00000341947 MAD1L1Q9Y6D9 718 aa16.63■□□□□ 0.25
COL11A2-201ENST00000341947 H2AFZP0C0S5 128 aa16.63■□□□□ 0.25
COL11A2-201ENST00000341947 CMA1P23946 247 aa16.63■□□□□ 0.25
COL11A2-201ENST00000341947 H2AFVQ71UI9 128 aa16.63■□□□□ 0.25
COL11A2-201ENST00000341947 ZNF577Q9BSK1 485 aa16.63■□□□□ 0.25
COL11A2-201ENST00000341947 HNRNPDLO14979 420 aaKnown RBP16.63■□□□□ 0.25
COL11A2-201ENST00000341947 CYP4A11Q02928 519 aa16.63■□□□□ 0.25
COL11A2-201ENST00000341947 DPH5Q9H2P9 285 aa16.63■□□□□ 0.25
COL11A2-201ENST00000341947 LEMD3Q9Y2U8 911 aa16.63■□□□□ 0.25
COL11A2-201ENST00000341947 GOLGA8KD6RF30 607 aa16.63■□□□□ 0.25
COL11A2-201ENST00000341947 C17orf53Q8N3J3 647 aaPredicted RBP16.63■□□□□ 0.25
COL11A2-201ENST00000341947 SYMPKQ92797 1274 aaKnown RBP16.63■□□□□ 0.25
COL11A2-201ENST00000341947 NT5C1BQ96P26 610 aa16.63■□□□□ 0.25
COL11A2-201ENST00000341947 KIF9Q9HAQ2 790 aa16.63■□□□□ 0.25
COL11A2-201ENST00000341947 ZNF148Q9UQR1 794 aa16.63■□□□□ 0.25
COL11A2-201ENST00000341947 LRRC24Q50LG9 513 aa16.62■□□□□ 0.25
COL11A2-201ENST00000341947 PRKAG2Q9UGJ0 569 aa16.62■□□□□ 0.25
COL11A2-201ENST00000341947 ATP10DQ9P241 1426 aa16.62■□□□□ 0.25
COL11A2-201ENST00000341947 EXOC3L4Q17RC7 722 aa16.62■□□□□ 0.25
COL11A2-201ENST00000341947 GPATCH4Q5T3I0 446 aaKnown RBP16.62■□□□□ 0.25
COL11A2-201ENST00000341947 EXOC8Q8IYI6 725 aa16.62■□□□□ 0.25
COL11A2-201ENST00000341947 SSH3Q8TE77 659 aa16.62■□□□□ 0.25
COL11A2-201ENST00000341947 SNX25Q9H3E2 840 aa16.62■□□□□ 0.25
COL11A2-201ENST00000341947 IFT122Q9HBG6 1241 aa16.62■□□□□ 0.25
COL11A2-201ENST00000341947 ADD3Q9UEY8 706 aaKnown RBP16.62■□□□□ 0.25
COL11A2-201ENST00000341947 SOS2Q07890 1332 aaPredicted RBP16.62■□□□□ 0.25
COL11A2-201ENST00000341947 CLRN2A0PK11 232 aa16.62■□□□□ 0.25
COL11A2-201ENST00000341947 LAD1O00515 517 aa16.62■□□□□ 0.25
COL11A2-201ENST00000341947 PTH1RQ03431 593 aa16.62■□□□□ 0.25
COL11A2-201ENST00000341947 PTPROQ16827 1216 aa16.62■□□□□ 0.25
COL11A2-201ENST00000341947 NOP9Q86U38 636 aaKnown RBP16.62■□□□□ 0.25
COL11A2-201ENST00000341947 PASKQ96RG2 1323 aa16.62■□□□□ 0.25
COL11A2-201ENST00000341947 EIF3CLB5ME19 914 aaKnown RBP16.62■□□□□ 0.25
COL11A2-201ENST00000341947 ADD1P35611 737 aaKnown RBP16.62■□□□□ 0.25
COL11A2-201ENST00000341947 EIF3CQ99613 913 aaKnown RBP16.62■□□□□ 0.25
COL11A2-201ENST00000341947 KIAA1024Q9UPX6 916 aa16.62■□□□□ 0.25
COL11A2-201ENST00000341947 STK38LQ9Y2H1 464 aa16.62■□□□□ 0.25
COL11A2-201ENST00000341947 BRD3Q15059 726 aa16.62■□□□□ 0.25
COL11A2-201ENST00000341947 TAB3Q8N5C8 712 aaPredicted RBP16.62■□□□□ 0.25
COL11A2-201ENST00000341947 GJA10Q969M2 543 aa16.62■□□□□ 0.25
COL11A2-201ENST00000341947 CRKLP46109 303 aaKnown RBP16.61■□□□□ 0.25
COL11A2-201ENST00000341947 UBE3CQ15386 1083 aa16.61■□□□□ 0.25
COL11A2-201ENST00000341947 TTBK2Q6IQ55 1244 aa16.61■□□□□ 0.25
COL11A2-201ENST00000341947 RSRC2Q7L4I2 434 aaKnown RBP16.61■□□□□ 0.25
COL11A2-201ENST00000341947 USP28Q96RU2 1077 aa16.61■□□□□ 0.25
COL11A2-201ENST00000341947 LMBRD1Q9NUN5 540 aa16.61■□□□□ 0.25
COL11A2-201ENST00000341947 TPCN1Q9ULQ1 816 aa16.61■□□□□ 0.25
COL11A2-201ENST00000341947 GAP43P17677 238 aa16.61■□□□□ 0.25
COL11A2-201ENST00000341947 CCND2P30279 289 aa16.61■□□□□ 0.25
COL11A2-201ENST00000341947 CCDC93Q567U6 631 aa16.61■□□□□ 0.25
COL11A2-201ENST00000341947 TMC4Q7Z404 712 aa16.61■□□□□ 0.25
COL11A2-201ENST00000341947 RYBPQ8N488 228 aaPredicted RBP16.61■□□□□ 0.25
COL11A2-201ENST00000341947 SLC7A3Q8WY07 619 aa16.61■□□□□ 0.25
COL11A2-201ENST00000341947 KCNQ3O43525 872 aa16.61■□□□□ 0.25
COL11A2-201ENST00000341947 FGAP02671 866 aa16.61■□□□□ 0.25
COL11A2-201ENST00000341947 DBN1Q16643 649 aa16.61■□□□□ 0.25
COL11A2-201ENST00000341947 SUPT20HL1Q3ZLR7 823 aa16.61■□□□□ 0.25
COL11A2-201ENST00000341947 RAB44Q7Z6P3 723 aaPredicted RBP16.61■□□□□ 0.25
COL11A2-201ENST00000341947 TRIM11Q96F44 468 aa16.61■□□□□ 0.25
COL11A2-201ENST00000341947 GDAP1L1Q96MZ0 367 aa16.61■□□□□ 0.25
COL11A2-201ENST00000341947 ANGPTL3Q9Y5C1 460 aa16.61■□□□□ 0.25
COL11A2-201ENST00000341947 MLH3Q9UHC1 1453 aa16.61■□□□□ 0.25
COL11A2-201ENST00000341947 TCP1P17987 556 aaKnown RBP16.61■□□□□ 0.25
COL11A2-201ENST00000341947 ZNF449Q6P9G9 518 aa16.61■□□□□ 0.25
COL11A2-201ENST00000341947 PLEKHG3A1L390 1219 aa16.61■□□□□ 0.25
COL11A2-201ENST00000341947 TTLL1O95922 423 aa16.61■□□□□ 0.25
COL11A2-201ENST00000341947 SPATA1Q5VX52 437 aa16.61■□□□□ 0.25
COL11A2-201ENST00000341947 ARMC9Q7Z3E5 817 aa16.61■□□□□ 0.25
COL11A2-201ENST00000341947 NACC1Q96RE7 527 aa16.61■□□□□ 0.25
COL11A2-201ENST00000341947 GREM2Q9H772 168 aa16.61■□□□□ 0.25
COL11A2-201ENST00000341947 LOC102724428A0A0B4J2F2 783 aa16.6■□□□□ 0.25
COL11A2-201ENST00000341947 SIK1P57059 783 aa16.6■□□□□ 0.25
COL11A2-201ENST00000341947 PTGDRQ13258 359 aa16.6■□□□□ 0.25
COL11A2-201ENST00000341947 PHLDB3Q6NSJ2 640 aa16.6■□□□□ 0.25
COL11A2-201ENST00000341947 ATP7AQ04656 1500 aa16.6■□□□□ 0.25
COL11A2-201ENST00000341947 BRD1O95696 1058 aa16.6■□□□□ 0.25
COL11A2-201ENST00000341947 YWHAGP61981 247 aaKnown RBP eCLIP16.6■□□□□ 0.25
COL11A2-201ENST00000341947 LMNB2Q03252 620 aa16.6■□□□□ 0.25
COL11A2-201ENST00000341947 ADAT2Q7Z6V5 191 aaKnown RBP16.6■□□□□ 0.25
COL11A2-201ENST00000341947 EAF2Q96CJ1 260 aaPredicted RBP16.6■□□□□ 0.25
COL11A2-201ENST00000341947 CHMP6Q96FZ7 201 aa16.6■□□□□ 0.25
COL11A2-201ENST00000341947 ACCSQ96QU6 501 aa16.6■□□□□ 0.25
COL11A2-201ENST00000341947 DESI2Q9BSY9 194 aa16.6■□□□□ 0.25
COL11A2-201ENST00000341947 CUEDC2Q9H467 287 aa16.6■□□□□ 0.25
COL11A2-201ENST00000341947 TRPC5Q9UL62 973 aaPredicted RBP16.6■□□□□ 0.25
COL11A2-201ENST00000341947 PCDHA4Q9UN74 947 aa16.6■□□□□ 0.25
COL11A2-201ENST00000341947 BLMP54132 1417 aaPredicted RBP16.6■□□□□ 0.25
COL11A2-201ENST00000341947 RNASELQ05823 741 aaKnown RBP16.6■□□□□ 0.25
COL11A2-201ENST00000341947 SPICE1Q8N0Z3 855 aa16.6■□□□□ 0.25
COL11A2-201ENST00000341947 MYRIPQ8NFW9 859 aa16.6■□□□□ 0.25
COL11A2-201ENST00000341947 CACTINQ8WUQ7 758 aaKnown RBP16.6■□□□□ 0.25
COL11A2-201ENST00000341947 ABCC2Q92887 1545 aa16.6■□□□□ 0.25
COL11A2-201ENST00000341947 SDCCAG3Q96C92 435 aa16.6■□□□□ 0.25
COL11A2-201ENST00000341947 ZSWIM6Q9HCJ5 1215 aa16.6■□□□□ 0.25
COL11A2-201ENST00000341947 SLC12A6Q9UHW9 1150 aa16.6■□□□□ 0.25
COL11A2-201ENST00000341947 BZW2Q9Y6E2 419 aaKnown RBP16.6■□□□□ 0.25
COL11A2-201ENST00000341947 ATP8B3O60423 1300 aa16.6■□□□□ 0.25
COL11A2-201ENST00000341947 ZSCAN20P17040 1043 aaPredicted RBP16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms