RNA–Protein interactions for RNA: ENST00000340650.5

NHLRC1-201, Transcript of NHL repeat containing E3 ubiquitin protein ligase 1, humanhuman

APPRIS P1 BASIC

Gene NHLRC1, Length 2,248 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1-201ENST00000340650 FAM198AQ9UFP1 575 aa22■■□□□ 1.11
NHLRC1-201ENST00000340650 LIMA1Q9UHB6 759 aaKnown RBP22■■□□□ 1.11
NHLRC1-201ENST00000340650 PRPF3O43395 683 aaKnown RBP21.99■■□□□ 1.11
NHLRC1-201ENST00000340650 ATP2B1P20020 1258 aa21.99■■□□□ 1.11
NHLRC1-201ENST00000340650 CASP8Q14790 479 aa21.99■■□□□ 1.11
NHLRC1-201ENST00000340650 RSBN1LQ6PCB5 846 aaPredicted RBP21.99■■□□□ 1.11
NHLRC1-201ENST00000340650 FAM71BQ8TC56 605 aa21.99■■□□□ 1.11
NHLRC1-201ENST00000340650 EPSTI1Q96J88 318 aa21.99■■□□□ 1.11
NHLRC1-201ENST00000340650 PRMT6Q96LA8 375 aaPredicted RBP21.99■■□□□ 1.11
NHLRC1-201ENST00000340650 FAN1Q9Y2M0 1017 aa21.99■■□□□ 1.11
NHLRC1-201ENST00000340650 LRRC10BA6NIK2 292 aa21.99■■□□□ 1.11
NHLRC1-201ENST00000340650 N4BP1O75113 896 aaKnown RBP21.99■■□□□ 1.11
NHLRC1-201ENST00000340650 HLA-DOAP06340 250 aa21.99■■□□□ 1.11
NHLRC1-201ENST00000340650 RHOXF2BP0C7M4 288 aa21.99■■□□□ 1.11
NHLRC1-201ENST00000340650 AKR1B1P15121 316 aa21.99■■□□□ 1.11
NHLRC1-201ENST00000340650 KIF5BP33176 963 aa21.99■■□□□ 1.11
NHLRC1-201ENST00000340650 AMPD2Q01433 879 aa21.99■■□□□ 1.11
NHLRC1-201ENST00000340650 CLEC10AQ8IUN9 316 aa21.99■■□□□ 1.11
NHLRC1-201ENST00000340650 RHOXF2Q9BQY4 288 aa21.99■■□□□ 1.11
NHLRC1-201ENST00000340650 SUGCTQ9HAC7 445 aa21.99■■□□□ 1.11
NHLRC1-201ENST00000340650 ABHD10Q9NUJ1 306 aa21.99■■□□□ 1.11
NHLRC1-201ENST00000340650 RRP15Q9Y3B9 282 aaKnown RBP21.99■■□□□ 1.11
NHLRC1-201ENST00000340650 BAZ2BQ9UIF8 2168 aaKnown RBP21.98■■□□□ 1.11
NHLRC1-201ENST00000340650 FAM196BA6NMK8 535 aa21.98■■□□□ 1.11
NHLRC1-201ENST00000340650 SOGA3Q5TF21 947 aa21.98■■□□□ 1.11
NHLRC1-201ENST00000340650 WDR93Q6P2C0 686 aa21.98■■□□□ 1.11
NHLRC1-201ENST00000340650 CYP26C1Q6V0L0 522 aa21.98■■□□□ 1.11
NHLRC1-201ENST00000340650 ZSCAN29Q8IWY8 852 aaPredicted RBP21.98■■□□□ 1.11
NHLRC1-201ENST00000340650 UPF1Q92900 1129 aaKnown RBP eCLIP21.98■■□□□ 1.11
NHLRC1-201ENST00000340650 FERMT2Q96AC1 680 aa21.98■■□□□ 1.11
NHLRC1-201ENST00000340650 DDTLA6NHG4 134 aaPredicted RBP21.98■■□□□ 1.11
NHLRC1-201ENST00000340650 EIF6P56537 245 aaKnown RBP21.98■■□□□ 1.11
NHLRC1-201ENST00000340650 TRIM14Q14142 442 aa21.98■■□□□ 1.11
NHLRC1-201ENST00000340650 NIM1KQ8IY84 436 aa21.98■■□□□ 1.11
NHLRC1-201ENST00000340650 SYMPKQ92797 1274 aaKnown RBP21.98■■□□□ 1.11
NHLRC1-201ENST00000340650 BMP15O95972 392 aa21.97■■□□□ 1.11
NHLRC1-201ENST00000340650 ABL1P00519 1130 aa21.97■■□□□ 1.11
NHLRC1-201ENST00000340650 GOLGA8HP0CJ92 632 aa21.97■■□□□ 1.11
NHLRC1-201ENST00000340650 CASP1P29466 404 aa21.97■■□□□ 1.11
NHLRC1-201ENST00000340650 SHMT1P34896 483 aa21.97■■□□□ 1.11
NHLRC1-201ENST00000340650 KRT31Q15323 416 aa21.97■■□□□ 1.11
NHLRC1-201ENST00000340650 MAD2L2Q9UI95 211 aa21.97■■□□□ 1.11
NHLRC1-201ENST00000340650 TFRCP02786 760 aaKnown RBP21.96■■□□□ 1.11
NHLRC1-201ENST00000340650 VEGFAP15692 232 aaPredicted RBP21.96■■□□□ 1.11
NHLRC1-201ENST00000340650 GRM4Q14833 912 aa21.96■■□□□ 1.11
NHLRC1-201ENST00000340650 SMYD4Q8IYR2 804 aaPredicted RBP21.96■■□□□ 1.11
NHLRC1-201ENST00000340650 IDI2Q9BXS1 227 aa21.96■■□□□ 1.11
NHLRC1-201ENST00000340650 ACBD3Q9H3P7 528 aa21.96■■□□□ 1.11
NHLRC1-201ENST00000340650 MED4Q9NPJ6 270 aa21.96■■□□□ 1.11
NHLRC1-201ENST00000340650 MYO6Q9UM54 1294 aa21.96■■□□□ 1.11
NHLRC1-201ENST00000340650 BCS1LQ9Y276 419 aa21.96■■□□□ 1.11
NHLRC1-201ENST00000340650 FAM205CA6NFA0 338 aa21.96■■□□□ 1.11
NHLRC1-201ENST00000340650 TRIM66O15016 1216 aa21.96■■□□□ 1.11
NHLRC1-201ENST00000340650 VIL1P09327 827 aaKnown RBP21.96■■□□□ 1.11
NHLRC1-201ENST00000340650 SH3BP5LQ7L8J4 393 aa21.96■■□□□ 1.11
NHLRC1-201ENST00000340650 SGIP1Q9BQI5 828 aa21.96■■□□□ 1.11
NHLRC1-201ENST00000340650 ZNRF3Q9ULT6 936 aa21.96■■□□□ 1.11
NHLRC1-201ENST00000340650 CTNND2Q9UQB3 1225 aa21.96■■□□□ 1.11
NHLRC1-201ENST00000340650 MYH6P13533 1939 aa21.96■■□□□ 1.11
NHLRC1-201ENST00000340650 SPAG1Q07617 926 aa21.95■■□□□ 1.1
NHLRC1-201ENST00000340650 C10orf67Q8IYJ2 551 aa21.95■■□□□ 1.1
NHLRC1-201ENST00000340650 PHF20Q9BVI0 1012 aa21.95■■□□□ 1.1
NHLRC1-201ENST00000340650 TAOK3Q9H2K8 898 aa21.95■■□□□ 1.1
NHLRC1-201ENST00000340650 DNAJC18Q9H819 358 aa21.95■■□□□ 1.1
NHLRC1-201ENST00000340650 SWAP70Q9UH65 585 aa21.95■■□□□ 1.1
NHLRC1-201ENST00000340650 MYH8P13535 1937 aa21.95■■□□□ 1.1
NHLRC1-201ENST00000340650 MPHOSPH10O00566 681 aaKnown RBP21.95■■□□□ 1.1
NHLRC1-201ENST00000340650 KRT2P35908 639 aa21.95■■□□□ 1.1
NHLRC1-201ENST00000340650 HSP90B2PQ58FF3 399 aa21.95■■□□□ 1.1
NHLRC1-201ENST00000340650 WWC2Q6AWC2 1192 aa21.95■■□□□ 1.1
NHLRC1-201ENST00000340650 NOA1Q8NC60 698 aaKnown RBP21.95■■□□□ 1.1
NHLRC1-201ENST00000340650 CPVLQ9H3G5 476 aa21.95■■□□□ 1.1
NHLRC1-201ENST00000340650 VIPAS39Q9H9C1 493 aa21.95■■□□□ 1.1
NHLRC1-201ENST00000340650 N4BP3O15049 544 aa21.94■■□□□ 1.1
NHLRC1-201ENST00000340650 XBP1P17861 261 aa21.94■■□□□ 1.1
NHLRC1-201ENST00000340650 CCT6AP40227 531 aaKnown RBP21.94■■□□□ 1.1
NHLRC1-201ENST00000340650 COPB1P53618 953 aaKnown RBP21.94■■□□□ 1.1
NHLRC1-201ENST00000340650 GMLQ99445 158 aa21.94■■□□□ 1.1
NHLRC1-201ENST00000340650 MTMR4Q9NYA4 1195 aa21.94■■□□□ 1.1
NHLRC1-201ENST00000340650 RWDD2AQ9UIY3 292 aa21.94■■□□□ 1.1
NHLRC1-201ENST00000340650 MYO3BQ8WXR4 1341 aa21.94■■□□□ 1.1
NHLRC1-201ENST00000340650 CLRN2A0PK11 232 aa21.94■■□□□ 1.1
NHLRC1-201ENST00000340650 RNF225M0QZC1 329 aaPredicted RBP21.94■■□□□ 1.1
NHLRC1-201ENST00000340650 SLC35G1Q2M3R5 365 aa21.94■■□□□ 1.1
NHLRC1-201ENST00000340650 EARS2Q5JPH6 523 aaKnown RBP21.94■■□□□ 1.1
NHLRC1-201ENST00000340650 USP17L2Q6R6M4 530 aa21.94■■□□□ 1.1
NHLRC1-201ENST00000340650 LRRC47Q8N1G4 583 aaKnown RBP21.94■■□□□ 1.1
NHLRC1-201ENST00000340650 LRRIQ3A6PVS8 624 aaPredicted RBP21.93■■□□□ 1.1
NHLRC1-201ENST00000340650 SHROOM1Q2M3G4 852 aaPredicted RBP21.93■■□□□ 1.1
NHLRC1-201ENST00000340650 OGFOD1Q8N543 542 aa21.93■■□□□ 1.1
NHLRC1-201ENST00000340650 DHX36Q9H2U1 1008 aaKnown RBP21.93■■□□□ 1.1
NHLRC1-201ENST00000340650 SPDYE2BA6NHP3 402 aa21.92■■□□□ 1.1
NHLRC1-201ENST00000340650 NFKBIEO00221 500 aa21.92■■□□□ 1.1
NHLRC1-201ENST00000340650 SPDYE6P0CI01 402 aa21.92■■□□□ 1.1
NHLRC1-201ENST00000340650 SCG2P13521 617 aa21.92■■□□□ 1.1
NHLRC1-201ENST00000340650 PTGER2P43116 358 aa21.92■■□□□ 1.1
NHLRC1-201ENST00000340650 AARSP49588 968 aaKnown RBP eCLIP21.92■■□□□ 1.1
NHLRC1-201ENST00000340650 CXCL9Q07325 125 aa21.92■■□□□ 1.1
NHLRC1-201ENST00000340650 TRAPPC11Q7Z392 1133 aa21.92■■□□□ 1.1
NHLRC1-201ENST00000340650 CCDC102AQ96A19 550 aa21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 114.3 ms