RNA–Protein interactions for RNA: ENST00000340457.8

UPK3BL1-201, Transcript of uroplakin 3B like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPK3BL1, Length 1,342 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BL1-201ENST00000340457 ATXN2LQ8WWM7 1075 aaKnown RBP16.33■□□□□ 0.2
UPK3BL1-201ENST00000340457 VWCEQ96DN2 955 aa16.33■□□□□ 0.2
UPK3BL1-201ENST00000340457 TRMT13Q9NUP7 481 aaKnown RBP16.33■□□□□ 0.2
UPK3BL1-201ENST00000340457 SLC4A7Q9Y6M7 1214 aa16.33■□□□□ 0.2
UPK3BL1-201ENST00000340457 PRRC2BQ5JSZ5 2229 aaKnown RBP16.32■□□□□ 0.2
UPK3BL1-201ENST00000340457 BAATQ14032 418 aaPredicted RBP16.32■□□□□ 0.2
UPK3BL1-201ENST00000340457 ALDH8A1Q9H2A2 487 aaPredicted RBP16.32■□□□□ 0.2
UPK3BL1-201ENST00000340457 TCF20Q9UGU0 1960 aaKnown RBP16.32■□□□□ 0.2
UPK3BL1-201ENST00000340457 NFIBO00712 420 aa16.31■□□□□ 0.2
UPK3BL1-201ENST00000340457 ERC2O15083 957 aa16.31■□□□□ 0.2
UPK3BL1-201ENST00000340457 PLA2G6O60733 806 aa16.31■□□□□ 0.2
UPK3BL1-201ENST00000340457 MRPS5P82675 430 aaKnown RBP16.31■□□□□ 0.2
UPK3BL1-201ENST00000340457 TTLL4Q14679 1199 aa16.31■□□□□ 0.2
UPK3BL1-201ENST00000340457 VPS53Q5VIR6 699 aa16.31■□□□□ 0.2
UPK3BL1-201ENST00000340457 PPP2R2DQ66LE6 453 aa16.31■□□□□ 0.2
UPK3BL1-201ENST00000340457 DEFB128Q7Z7B8 93 aa16.31■□□□□ 0.2
UPK3BL1-201ENST00000340457 VTA1Q9NP79 307 aa16.31■□□□□ 0.2
UPK3BL1-201ENST00000340457 SCN5AQ14524 2016 aa16.31■□□□□ 0.2
UPK3BL1-201ENST00000340457 FRMPD2Q68DX3 1309 aaPredicted RBP16.31■□□□□ 0.2
UPK3BL1-201ENST00000340457 TTC41PQ6P2S7 1318 aa16.31■□□□□ 0.2
UPK3BL1-201ENST00000340457 RFXAPO00287 272 aa16.3■□□□□ 0.2
UPK3BL1-201ENST00000340457 ICAM1P05362 532 aa16.3■□□□□ 0.2
UPK3BL1-201ENST00000340457 MYL3P08590 195 aa16.3■□□□□ 0.2
UPK3BL1-201ENST00000340457 RPUSD2Q8IZ73 545 aaKnown RBP16.3■□□□□ 0.2
UPK3BL1-201ENST00000340457 NECAB3Q96P71 396 aaPredicted RBP16.3■□□□□ 0.2
UPK3BL1-201ENST00000340457 WDR11Q9BZH6 1224 aa16.3■□□□□ 0.2
UPK3BL1-201ENST00000340457 GPCPD1Q9NPB8 672 aa16.3■□□□□ 0.2
UPK3BL1-201ENST00000340457 TOMM22Q9NS69 142 aa16.3■□□□□ 0.2
UPK3BL1-201ENST00000340457 Q9Y3F1 56 aa16.3■□□□□ 0.2
UPK3BL1-201ENST00000340457 PCDHB15Q9Y5E8 787 aa16.3■□□□□ 0.2
UPK3BL1-201ENST00000340457 PTPDC1A2A3K4 754 aa16.29■□□□□ 0.2
UPK3BL1-201ENST00000340457 ATP2A2P16615 1042 aaKnown RBP16.29■□□□□ 0.2
UPK3BL1-201ENST00000340457 ALDH5A1P51649 535 aaPredicted RBP16.29■□□□□ 0.2
UPK3BL1-201ENST00000340457 DUSP28Q4G0W2 176 aa16.29■□□□□ 0.2
UPK3BL1-201ENST00000340457 RRP12Q5JTH9 1297 aaKnown RBP16.29■□□□□ 0.2
UPK3BL1-201ENST00000340457 SLC30A10Q6XR72 485 aa16.29■□□□□ 0.2
UPK3BL1-201ENST00000340457 MORC4Q8TE76 937 aa16.29■□□□□ 0.2
UPK3BL1-201ENST00000340457 UHRF1Q96T88 793 aaPredicted RBP16.29■□□□□ 0.2
UPK3BL1-201ENST00000340457 RANBP17Q9H2T7 1088 aaKnown RBP16.29■□□□□ 0.2
UPK3BL1-201ENST00000340457 CERS4Q9HA82 394 aa16.29■□□□□ 0.2
UPK3BL1-201ENST00000340457 TNKSO95271 1327 aa16.29■□□□□ 0.2
UPK3BL1-201ENST00000340457 MX1P20591 662 aa16.28■□□□□ 0.2
UPK3BL1-201ENST00000340457 CALML3P27482 149 aa16.28■□□□□ 0.2
UPK3BL1-201ENST00000340457 PURAQ00577 322 aaKnown RBP16.28■□□□□ 0.2
UPK3BL1-201ENST00000340457 TFF2Q03403 129 aa16.28■□□□□ 0.2
UPK3BL1-201ENST00000340457 FAM47CQ5HY64 1035 aa16.28■□□□□ 0.2
UPK3BL1-201ENST00000340457 PPP4R3BQ5MIZ7 849 aa16.28■□□□□ 0.2
UPK3BL1-201ENST00000340457 SYDE2Q5VT97 1194 aa16.28■□□□□ 0.2
UPK3BL1-201ENST00000340457 IL27Q8NEV9 243 aa16.28■□□□□ 0.2
UPK3BL1-201ENST00000340457 OR6J1Q8NGC5 347 aa16.28■□□□□ 0.2
UPK3BL1-201ENST00000340457 DCAF4Q8WV16 495 aa16.28■□□□□ 0.2
UPK3BL1-201ENST00000340457 PCDHA11Q9Y5I1 949 aa16.28■□□□□ 0.2
UPK3BL1-201ENST00000340457 RBAK-RBAKDNI3L0D1 243 aa16.27■□□□□ 0.2
UPK3BL1-201ENST00000340457 NEFLP07196 543 aa16.27■□□□□ 0.2
UPK3BL1-201ENST00000340457 CHMP4BP1P59074 171 aa16.27■□□□□ 0.2
UPK3BL1-201ENST00000340457 SKIV2LQ15477 1246 aaKnown RBP16.27■□□□□ 0.2
UPK3BL1-201ENST00000340457 NBPF20Q3BBV1 942 aa16.27■□□□□ 0.2
UPK3BL1-201ENST00000340457 COPS5Q92905 334 aa16.27■□□□□ 0.2
UPK3BL1-201ENST00000340457 SEZ6LQ9BYH1 1024 aa16.27■□□□□ 0.2
UPK3BL1-201ENST00000340457 POLR3EQ9NVU0 708 aa16.27■□□□□ 0.2
UPK3BL1-201ENST00000340457 ADD3Q9UEY8 706 aaKnown RBP16.27■□□□□ 0.2
UPK3BL1-201ENST00000340457 TET1Q8NFU7 2136 aa16.26■□□□□ 0.19
UPK3BL1-201ENST00000340457 CA3P07451 260 aa16.26■□□□□ 0.19
UPK3BL1-201ENST00000340457 KRT40Q6A162 431 aa16.26■□□□□ 0.19
UPK3BL1-201ENST00000340457 CLEC4DQ8WXI8 215 aa16.26■□□□□ 0.19
UPK3BL1-201ENST00000340457 TMEM47Q9BQJ4 181 aa16.26■□□□□ 0.19
UPK3BL1-201ENST00000340457 GPHNQ9NQX3 736 aaPredicted RBP16.26■□□□□ 0.19
UPK3BL1-201ENST00000340457 ANAPC4Q9UJX5 808 aa16.26■□□□□ 0.19
UPK3BL1-201ENST00000340457 EPOPA6NHQ4 379 aa16.25■□□□□ 0.19
UPK3BL1-201ENST00000340457 ORC4O43929 436 aa16.25■□□□□ 0.19
UPK3BL1-201ENST00000340457 ARHGEF15O94989 841 aa16.25■□□□□ 0.19
UPK3BL1-201ENST00000340457 SUPT20HL2P0C7V6 817 aa16.25■□□□□ 0.19
UPK3BL1-201ENST00000340457 NOVP48745 357 aa16.25■□□□□ 0.19
UPK3BL1-201ENST00000340457 CPT1AP50416 773 aa16.25■□□□□ 0.19
UPK3BL1-201ENST00000340457 KCNQ1P51787 676 aa16.25■□□□□ 0.19
UPK3BL1-201ENST00000340457 TMEM67Q5HYA8 995 aa16.25■□□□□ 0.19
UPK3BL1-201ENST00000340457 BTNL9Q6UXG8 535 aa16.25■□□□□ 0.19
UPK3BL1-201ENST00000340457 MTG1Q9BT17 334 aaPredicted RBP16.25■□□□□ 0.19
UPK3BL1-201ENST00000340457 SCN10AQ9Y5Y9 1956 aa16.24■□□□□ 0.19
UPK3BL1-201ENST00000340457 RBM47A0AV96 593 aaKnown RBP16.24■□□□□ 0.19
UPK3BL1-201ENST00000340457 TOP1P11387 765 aaKnown RBP16.24■□□□□ 0.19
UPK3BL1-201ENST00000340457 HAND2P61296 217 aa16.24■□□□□ 0.19
UPK3BL1-201ENST00000340457 PDE4DQ08499 809 aa16.24■□□□□ 0.19
UPK3BL1-201ENST00000340457 PPP2R5BQ15173 497 aa16.24■□□□□ 0.19
UPK3BL1-201ENST00000340457 RNF207Q6ZRF8 634 aa16.24■□□□□ 0.19
UPK3BL1-201ENST00000340457 FAM227BQ96M60 508 aa16.24■□□□□ 0.19
UPK3BL1-201ENST00000340457 FTOQ9C0B1 505 aaKnown RBP eCLIP16.24■□□□□ 0.19
UPK3BL1-201ENST00000340457 TSPYL2Q9H2G4 693 aaPredicted RBP16.24■□□□□ 0.19
UPK3BL1-201ENST00000340457 TRIP12Q14669 1992 aaPredicted RBP16.24■□□□□ 0.19
UPK3BL1-201ENST00000340457 FGAP02671 866 aa16.23■□□□□ 0.19
UPK3BL1-201ENST00000340457 BMP1P13497 986 aa16.23■□□□□ 0.19
UPK3BL1-201ENST00000340457 RPS6P62753 249 aaKnown RBP16.23■□□□□ 0.19
UPK3BL1-201ENST00000340457 SPRED2Q7Z698 418 aa16.23■□□□□ 0.19
UPK3BL1-201ENST00000340457 CPVLQ9H3G5 476 aa16.23■□□□□ 0.19
UPK3BL1-201ENST00000340457 MTCH2Q9Y6C9 303 aa16.23■□□□□ 0.19
UPK3BL1-201ENST00000340457 SALL3Q9BXA9 1300 aa16.23■□□□□ 0.19
UPK3BL1-201ENST00000340457 BRWD1Q9NSI6 2320 aa16.23■□□□□ 0.19
UPK3BL1-201ENST00000340457 A0A0D9SFI3 127 aa16.22■□□□□ 0.19
UPK3BL1-201ENST00000340457 ARIH2O95376 493 aa16.22■□□□□ 0.19
UPK3BL1-201ENST00000340457 PFKMP08237 780 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms