RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 TBCKQ8TEA7 893 aa16.03■□□□□ 0.16
CPSF7-201ENST00000340437 COA7Q96BR5 231 aa16.03■□□□□ 0.16
CPSF7-201ENST00000340437 CALML4Q96GE6 196 aa16.03■□□□□ 0.16
CPSF7-201ENST00000340437 CENPHQ9H3R5 247 aa16.03■□□□□ 0.16
CPSF7-201ENST00000340437 SEC63Q9UGP8 760 aaKnown RBP16.03■□□□□ 0.16
CPSF7-201ENST00000340437 TULP2O00295 520 aa16.03■□□□□ 0.16
CPSF7-201ENST00000340437 OR52Z1P0C646 297 aa16.03■□□□□ 0.16
CPSF7-201ENST00000340437 RASSF7Q02833 373 aa16.03■□□□□ 0.16
CPSF7-201ENST00000340437 CKAP4Q07065 602 aaKnown RBP16.03■□□□□ 0.16
CPSF7-201ENST00000340437 SLC35G1Q2M3R5 365 aa16.03■□□□□ 0.16
CPSF7-201ENST00000340437 KCTD16Q68DU8 428 aa16.03■□□□□ 0.16
CPSF7-201ENST00000340437 LRRC31Q6UY01 552 aa16.03■□□□□ 0.16
CPSF7-201ENST00000340437 POTEDQ86YR6 584 aa16.03■□□□□ 0.16
CPSF7-201ENST00000340437 MARCH10Q8NA82 808 aaPredicted RBP16.03■□□□□ 0.16
CPSF7-201ENST00000340437 PIGSQ96S52 555 aa16.03■□□□□ 0.16
CPSF7-201ENST00000340437 SETDB2Q96T68 719 aa16.03■□□□□ 0.16
CPSF7-201ENST00000340437 THAP9Q9H5L6 903 aa16.03■□□□□ 0.16
CPSF7-201ENST00000340437 MAD2L2Q9UI95 211 aa16.03■□□□□ 0.16
CPSF7-201ENST00000340437 SLIT2O94813 1529 aa16.03■□□□□ 0.16
CPSF7-201ENST00000340437 ORC4O43929 436 aa16.03■□□□□ 0.16
CPSF7-201ENST00000340437 TACC1O75410 805 aa16.03■□□□□ 0.16
CPSF7-201ENST00000340437 CCNE1P24864 410 aa16.03■□□□□ 0.16
CPSF7-201ENST00000340437 MEX3CQ5U5Q3 659 aaKnown RBP16.03■□□□□ 0.16
CPSF7-201ENST00000340437 CERS3Q8IU89 383 aa16.03■□□□□ 0.16
CPSF7-201ENST00000340437 CLEC10AQ8IUN9 316 aa16.03■□□□□ 0.16
CPSF7-201ENST00000340437 GIMAP8Q8ND71 665 aaPredicted RBP16.03■□□□□ 0.16
CPSF7-201ENST00000340437 ZNF507Q8TCN5 953 aa16.03■□□□□ 0.16
CPSF7-201ENST00000340437 RUFY1Q96T51 708 aa16.03■□□□□ 0.16
CPSF7-201ENST00000340437 DNAJC7Q99615 494 aa16.03■□□□□ 0.16
CPSF7-201ENST00000340437 TRIM9Q9C026 710 aa16.03■□□□□ 0.16
CPSF7-201ENST00000340437 DMGDHQ9UI17 866 aaKnown RBP16.03■□□□□ 0.16
CPSF7-201ENST00000340437 HPCAL4Q9UM19 191 aa16.03■□□□□ 0.16
CPSF7-201ENST00000340437 GOLGA6BA6NDN3 693 aa16.02■□□□□ 0.16
CPSF7-201ENST00000340437 POTEMA6NI47 508 aa16.02■□□□□ 0.16
CPSF7-201ENST00000340437 PSMD14O00487 310 aa16.02■□□□□ 0.16
CPSF7-201ENST00000340437 SRGNP10124 158 aa16.02■□□□□ 0.16
CPSF7-201ENST00000340437 APBA1Q02410 837 aa16.02■□□□□ 0.16
CPSF7-201ENST00000340437 NONOQ15233 471 aaKnown RBP eCLIP16.02■□□□□ 0.16
CPSF7-201ENST00000340437 NELFCDQ8IXH7 590 aa16.02■□□□□ 0.16
CPSF7-201ENST00000340437 GLIS3Q8NEA6 775 aa16.02■□□□□ 0.16
CPSF7-201ENST00000340437 MS4A14Q96JA4 679 aa16.02■□□□□ 0.16
CPSF7-201ENST00000340437 ZNF804BA4D1E1 1349 aa16.02■□□□□ 0.16
CPSF7-201ENST00000340437 PARP4Q9UKK3 1724 aaKnown RBP16.02■□□□□ 0.15
CPSF7-201ENST00000340437 ESYT3A0FGR9 886 aa16.02■□□□□ 0.15
CPSF7-201ENST00000340437 TNNI2P48788 182 aa16.02■□□□□ 0.15
CPSF7-201ENST00000340437 ZBED6P86452 979 aa16.02■□□□□ 0.15
CPSF7-201ENST00000340437 PICALMQ13492 652 aa16.02■□□□□ 0.15
CPSF7-201ENST00000340437 GPCPD1Q9NPB8 672 aa16.02■□□□□ 0.15
CPSF7-201ENST00000340437 PDS5AQ29RF7 1337 aaKnown RBP16.02■□□□□ 0.15
CPSF7-201ENST00000340437 SYF2O95926 243 aaKnown RBP16.01■□□□□ 0.15
CPSF7-201ENST00000340437 IVLP07476 585 aa16.01■□□□□ 0.15
CPSF7-201ENST00000340437 MAGEA1P43355 309 aa16.01■□□□□ 0.15
CPSF7-201ENST00000340437 PDE4CQ08493 712 aa16.01■□□□□ 0.15
CPSF7-201ENST00000340437 MUM1L1Q5H9M0 696 aa16.01■□□□□ 0.15
CPSF7-201ENST00000340437 PROCA1Q8NCQ7 364 aaPredicted RBP16.01■□□□□ 0.15
CPSF7-201ENST00000340437 BICDL2A1A5D9 508 aa16.01■□□□□ 0.15
CPSF7-201ENST00000340437 GOLGA6CA6NDK9 693 aa16.01■□□□□ 0.15
CPSF7-201ENST00000340437 RASSF10A6NK89 507 aa16.01■□□□□ 0.15
CPSF7-201ENST00000340437 RHOBTB3O94955 611 aa16.01■□□□□ 0.15
CPSF7-201ENST00000340437 GOLGA6DP0CG33 693 aa16.01■□□□□ 0.15
CPSF7-201ENST00000340437 GFPT1Q06210 699 aaPredicted RBP16.01■□□□□ 0.15
CPSF7-201ENST00000340437 FBXO33Q7Z6M2 555 aa16.01■□□□□ 0.15
CPSF7-201ENST00000340437 EHBP1Q8NDI1 1231 aa16.01■□□□□ 0.15
CPSF7-201ENST00000340437 GOLGA6AQ9NYA3 693 aa16.01■□□□□ 0.15
CPSF7-201ENST00000340437 ZNF263O14978 683 aa16.01■□□□□ 0.15
CPSF7-201ENST00000340437 SV2BQ7L1I2 683 aa16.01■□□□□ 0.15
CPSF7-201ENST00000340437 PACSIN2Q9UNF0 486 aaPredicted RBP16.01■□□□□ 0.15
CPSF7-201ENST00000340437 PCDHA13Q9Y5I0 950 aa16.01■□□□□ 0.15
CPSF7-201ENST00000340437 TAF1P21675 1872 aa16■□□□□ 0.15
CPSF7-201ENST00000340437 STXBP3O00186 592 aa16■□□□□ 0.15
CPSF7-201ENST00000340437 ATP1A2P50993 1020 aa16■□□□□ 0.15
CPSF7-201ENST00000340437 PTF1AQ7RTS3 328 aa16■□□□□ 0.15
CPSF7-201ENST00000340437 DNAAF5Q86Y56 855 aa16■□□□□ 0.15
CPSF7-201ENST00000340437 LRP6O75581 1613 aa16■□□□□ 0.15
CPSF7-201ENST00000340437 UBR2Q8IWV8 1755 aa16■□□□□ 0.15
CPSF7-201ENST00000340437 LRRC53A6NM62 1247 aa16■□□□□ 0.15
CPSF7-201ENST00000340437 CCT5P48643 541 aa16■□□□□ 0.15
CPSF7-201ENST00000340437 KIF11P52732 1056 aa16■□□□□ 0.15
CPSF7-201ENST00000340437 CCDC40Q4G0X9 1142 aa16■□□□□ 0.15
CPSF7-201ENST00000340437 C12orf60Q5U649 245 aa16■□□□□ 0.15
CPSF7-201ENST00000340437 FAM114A1Q8IWE2 563 aa16■□□□□ 0.15
CPSF7-201ENST00000340437 FAM76AQ8TAV0 307 aa16■□□□□ 0.15
CPSF7-201ENST00000340437 C6orf50Q9HD87 102 aa16■□□□□ 0.15
CPSF7-201ENST00000340437 KBTBD4Q9NVX7 518 aa16■□□□□ 0.15
CPSF7-201ENST00000340437 DCCP43146 1447 aa16■□□□□ 0.15
CPSF7-201ENST00000340437 CHD4Q14839 1912 aa16■□□□□ 0.15
CPSF7-201ENST00000340437 LRRC47Q8N1G4 583 aaKnown RBP16■□□□□ 0.15
CPSF7-201ENST00000340437 DHTKD1Q96HY7 919 aaPredicted RBP16■□□□□ 0.15
CPSF7-201ENST00000340437 EYA3Q99504 573 aa16■□□□□ 0.15
CPSF7-201ENST00000340437 SEMA6BQ9H3T3 888 aa16■□□□□ 0.15
CPSF7-201ENST00000340437 SAMM50Q9Y512 469 aa16■□□□□ 0.15
CPSF7-201ENST00000340437 ZNF142P52746 1687 aaPredicted RBP16■□□□□ 0.15
CPSF7-201ENST00000340437 A0A1W2PQC6 194 aa15.99■□□□□ 0.15
CPSF7-201ENST00000340437 ZEB2O60315 1214 aa15.99■□□□□ 0.15
CPSF7-201ENST00000340437 GNAQP50148 359 aa15.99■□□□□ 0.15
CPSF7-201ENST00000340437 GUCY2FP51841 1108 aa15.99■□□□□ 0.15
CPSF7-201ENST00000340437 FAM107BQ9H098 131 aa15.99■□□□□ 0.15
CPSF7-201ENST00000340437 NDST4Q9H3R1 872 aa15.99■□□□□ 0.15
CPSF7-201ENST00000340437 MED4Q9NPJ6 270 aa15.99■□□□□ 0.15
CPSF7-201ENST00000340437 BARHL2Q9NY43 387 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms