RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 C6orf222P0C671 652 aaPredicted RBP14.23□□□□□ -0.13
LIN54-201ENST00000340417 KCNJ6P48051 423 aa14.23□□□□□ -0.13
LIN54-201ENST00000340417 CYP2J2P51589 502 aa14.23□□□□□ -0.13
LIN54-201ENST00000340417 IFRD2Q12894 506 aaPredicted RBP14.23□□□□□ -0.13
LIN54-201ENST00000340417 CHADLQ6NUI6 762 aa14.23□□□□□ -0.13
LIN54-201ENST00000340417 MRPS9P82933 396 aaKnown RBP14.23□□□□□ -0.13
LIN54-201ENST00000340417 NBPF9Q3BBW0 867 aa14.23□□□□□ -0.13
LIN54-201ENST00000340417 SPATA33Q96N06 139 aa14.23□□□□□ -0.13
LIN54-201ENST00000340417 ZMYND15Q9H091 742 aa14.23□□□□□ -0.13
LIN54-201ENST00000340417 BTBD18B2RXH4 712 aa14.23□□□□□ -0.13
LIN54-201ENST00000340417 STK25O00506 426 aa14.23□□□□□ -0.13
LIN54-201ENST00000340417 DEFB115Q30KQ5 88 aa14.23□□□□□ -0.13
LIN54-201ENST00000340417 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.23□□□□□ -0.13
LIN54-201ENST00000340417 COL4A3BPQ9Y5P4 624 aa14.23□□□□□ -0.13
LIN54-201ENST00000340417 IGSF3O75054 1194 aa14.22□□□□□ -0.13
LIN54-201ENST00000340417 ARPP19P56211 112 aa14.22□□□□□ -0.13
LIN54-201ENST00000340417 KIAA1024Q9UPX6 916 aa14.22□□□□□ -0.13
LIN54-201ENST00000340417 ABCC12Q96J65 1359 aa14.22□□□□□ -0.13
LIN54-201ENST00000340417 LUZP1Q86V48 1076 aa14.22□□□□□ -0.13
LIN54-201ENST00000340417 AOPEPQ8N6M6 819 aa14.22□□□□□ -0.13
LIN54-201ENST00000340417 NOC4LQ9BVI4 516 aaKnown RBP14.22□□□□□ -0.13
LIN54-201ENST00000340417 SLC25A27O95847 323 aa14.22□□□□□ -0.13
LIN54-201ENST00000340417 ANKRD13CQ8N6S4 541 aa14.22□□□□□ -0.13
LIN54-201ENST00000340417 RIOK1Q9BRS2 568 aaKnown RBP14.22□□□□□ -0.13
LIN54-201ENST00000340417 SPDYE2BA6NHP3 402 aa14.22□□□□□ -0.13
LIN54-201ENST00000340417 SPDYE6P0CI01 402 aa14.22□□□□□ -0.13
LIN54-201ENST00000340417 ANO6Q4KMQ2 910 aa14.22□□□□□ -0.13
LIN54-201ENST00000340417 FAM167AQ96KS9 214 aa14.22□□□□□ -0.13
LIN54-201ENST00000340417 NLRP4Q96MN2 994 aa14.22□□□□□ -0.13
LIN54-201ENST00000340417 PCDHA6Q9UN73 950 aa14.22□□□□□ -0.13
LIN54-201ENST00000340417 PCDHA8Q9Y5H6 950 aa14.22□□□□□ -0.13
LIN54-201ENST00000340417 CYLC1P35663 651 aaPredicted RBP14.22□□□□□ -0.13
LIN54-201ENST00000340417 CATSPER4Q7RTX7 472 aa14.22□□□□□ -0.13
LIN54-201ENST00000340417 OPTNQ96CV9 577 aa14.22□□□□□ -0.13
LIN54-201ENST00000340417 GBP3Q9H0R5 595 aa14.22□□□□□ -0.13
LIN54-201ENST00000340417 GRPEL1Q9HAV7 217 aa14.22□□□□□ -0.13
LIN54-201ENST00000340417 NMT2O60551 498 aa14.21□□□□□ -0.13
LIN54-201ENST00000340417 PAFAH1B1P43034 410 aa14.21□□□□□ -0.13
LIN54-201ENST00000340417 ZFP91Q96JP5 570 aaPredicted RBP14.21□□□□□ -0.13
LIN54-201ENST00000340417 KMT5AQ9NQR1 393 aa14.21□□□□□ -0.13
LIN54-201ENST00000340417 ADM5C9JUS6 153 aa14.21□□□□□ -0.13
LIN54-201ENST00000340417 KLRK1P26718 216 aa14.21□□□□□ -0.13
LIN54-201ENST00000340417 ELF1P32519 619 aa14.21□□□□□ -0.13
LIN54-201ENST00000340417 RGS2P41220 211 aa14.21□□□□□ -0.13
LIN54-201ENST00000340417 AP3B2Q13367 1082 aa14.21□□□□□ -0.13
LIN54-201ENST00000340417 LDHDQ86WU2 507 aa14.21□□□□□ -0.13
LIN54-201ENST00000340417 CSGALNACT2Q8N6G5 542 aa14.21□□□□□ -0.13
LIN54-201ENST00000340417 SRGAP2CP0DJJ0 459 aa14.21□□□□□ -0.13
LIN54-201ENST00000340417 C12orf60Q5U649 245 aa14.21□□□□□ -0.13
LIN54-201ENST00000340417 TICAM2Q86XR7 235 aa14.21□□□□□ -0.13
LIN54-201ENST00000340417 STAMQ92783 540 aa14.21□□□□□ -0.13
LIN54-201ENST00000340417 PANK4Q9NVE7 773 aa14.21□□□□□ -0.13
LIN54-201ENST00000340417 RGL2O15211 777 aa14.21□□□□□ -0.14
LIN54-201ENST00000340417 FAM160A1Q05DH4 1040 aa14.21□□□□□ -0.14
LIN54-201ENST00000340417 TKFCQ3LXA3 575 aa14.21□□□□□ -0.14
LIN54-201ENST00000340417 ARMCX5Q6P1M9 558 aa14.21□□□□□ -0.14
LIN54-201ENST00000340417 OTUD6BQ8N6M0 293 aa14.21□□□□□ -0.14
LIN54-201ENST00000340417 POMGNT1Q8WZA1 660 aa14.21□□□□□ -0.14
LIN54-201ENST00000340417 TPCN1Q9ULQ1 816 aa14.21□□□□□ -0.14
LIN54-201ENST00000340417 HNRNPDLO14979 420 aaKnown RBP14.21□□□□□ -0.14
LIN54-201ENST00000340417 DAPK3O43293 454 aa14.21□□□□□ -0.14
LIN54-201ENST00000340417 SEC24BO95487 1268 aa14.21□□□□□ -0.14
LIN54-201ENST00000340417 CCDC84Q86UT8 332 aaPredicted RBP14.21□□□□□ -0.14
LIN54-201ENST00000340417 GOLGA5Q8TBA6 731 aa14.21□□□□□ -0.14
LIN54-201ENST00000340417 PI4K2BQ8TCG2 481 aa14.21□□□□□ -0.14
LIN54-201ENST00000340417 KIF28PB7ZC32 967 aa14.2□□□□□ -0.14
LIN54-201ENST00000340417 BIRC2Q13490 618 aa14.2□□□□□ -0.14
LIN54-201ENST00000340417 SLC17A8Q8NDX2 589 aa14.2□□□□□ -0.14
LIN54-201ENST00000340417 BLZF1Q9H2G9 400 aa14.2□□□□□ -0.14
LIN54-201ENST00000340417 JAK3P52333 1124 aa14.2□□□□□ -0.14
LIN54-201ENST00000340417 PXDNQ92626 1479 aa14.2□□□□□ -0.14
LIN54-201ENST00000340417 DYNC1LI2O43237 492 aaPredicted RBP14.2□□□□□ -0.14
LIN54-201ENST00000340417 TRPA1O75762 1119 aa14.2□□□□□ -0.14
LIN54-201ENST00000340417 TXNP10599 105 aaKnown RBP14.2□□□□□ -0.14
LIN54-201ENST00000340417 FAM173BQ6P4H8 233 aa14.2□□□□□ -0.14
LIN54-201ENST00000340417 NEDD1Q8NHV4 660 aa14.2□□□□□ -0.14
LIN54-201ENST00000340417 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.2□□□□□ -0.14
LIN54-201ENST00000340417 ARHGEF37A1IGU5 675 aa14.2□□□□□ -0.14
LIN54-201ENST00000340417 PRPF3O43395 683 aaKnown RBP14.2□□□□□ -0.14
LIN54-201ENST00000340417 CCDC50Q8IVM0 306 aa14.2□□□□□ -0.14
LIN54-201ENST00000340417 TCP11Q8WWU5 503 aa14.2□□□□□ -0.14
LIN54-201ENST00000340417 MAK16Q9BXY0 300 aaKnown RBP14.19□□□□□ -0.14
LIN54-201ENST00000340417 CPVLQ9H3G5 476 aa14.19□□□□□ -0.14
LIN54-201ENST00000340417 GINM1Q9NU53 330 aa14.19□□□□□ -0.14
LIN54-201ENST00000340417 ARHGEF28Q8N1W1 1705 aaKnown RBP14.19□□□□□ -0.14
LIN54-201ENST00000340417 PTGDRQ13258 359 aa14.19□□□□□ -0.14
LIN54-201ENST00000340417 NBPF12Q5TAG4 269 aaPredicted RBP14.19□□□□□ -0.14
LIN54-201ENST00000340417 MYSM1Q5VVJ2 828 aa14.19□□□□□ -0.14
LIN54-201ENST00000340417 KCNV1Q6PIU1 500 aa14.19□□□□□ -0.14
LIN54-201ENST00000340417 ERO1AQ96HE7 468 aa14.19□□□□□ -0.14
LIN54-201ENST00000340417 DNAJC25Q9H1X3 360 aa14.19□□□□□ -0.14
LIN54-201ENST00000340417 EFCC1Q9HA90 598 aa14.19□□□□□ -0.14
LIN54-201ENST00000340417 NEDD4P46934 1319 aa14.19□□□□□ -0.14
LIN54-201ENST00000340417 GSG1L2A8MUP6 293 aa14.19□□□□□ -0.14
LIN54-201ENST00000340417 PTGS1P23219 599 aa14.19□□□□□ -0.14
LIN54-201ENST00000340417 PRPHP41219 470 aa14.19□□□□□ -0.14
LIN54-201ENST00000340417 LIFRP42702 1097 aa14.19□□□□□ -0.14
LIN54-201ENST00000340417 GSDMDP57764 484 aa14.19□□□□□ -0.14
LIN54-201ENST00000340417 RNF180Q86T96 592 aa14.19□□□□□ -0.14
LIN54-201ENST00000340417 SIRT2Q8IXJ6 389 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms