RNA–Protein interactions for RNA: ENST00000340157.8

VRK2-201, Transcript of vaccinia related kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK2, Length 1,888 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-201ENST00000340157 C11orf57Q6ZUT1 292 aaPredicted RBP24.04■■□□□ 1.44
VRK2-201ENST00000340157 LDHDQ86WU2 507 aa24.04■■□□□ 1.44
VRK2-201ENST00000340157 ZC3H15Q8WU90 426 aaKnown RBP24.04■■□□□ 1.44
VRK2-201ENST00000340157 TBC1D5Q92609 795 aa24.04■■□□□ 1.44
VRK2-201ENST00000340157 DHX58Q96C10 678 aa24.04■■□□□ 1.44
VRK2-201ENST00000340157 TANGO6Q9C0B7 1094 aa24.04■■□□□ 1.44
VRK2-201ENST00000340157 TAF1DQ9H5J8 278 aaPredicted RBP24.04■■□□□ 1.44
VRK2-201ENST00000340157 TUBE1Q9UJT0 475 aa24.04■■□□□ 1.44
VRK2-201ENST00000340157 E2F4Q16254 413 aa24.03■■□□□ 1.44
VRK2-201ENST00000340157 STX1AQ16623 288 aa24.03■■□□□ 1.44
VRK2-201ENST00000340157 FAM200AQ8TCP9 573 aa24.03■■□□□ 1.44
VRK2-201ENST00000340157 C12orf42Q96LP6 360 aa24.03■■□□□ 1.44
VRK2-201ENST00000340157 AFG3L2Q9Y4W6 797 aa24.03■■□□□ 1.44
VRK2-201ENST00000340157 PRR29P0C7W0 189 aa24.02■■□□□ 1.44
VRK2-201ENST00000340157 HMGCS2P54868 508 aa24.02■■□□□ 1.44
VRK2-201ENST00000340157 GRAMD1CQ8IYS0 662 aa24.02■■□□□ 1.44
VRK2-201ENST00000340157 AGBL1Q96MI9 1066 aa24.02■■□□□ 1.44
VRK2-201ENST00000340157 PPP1R9AQ9ULJ8 1098 aa24.02■■□□□ 1.44
VRK2-201ENST00000340157 FLOT1O75955 427 aa24.02■■□□□ 1.44
VRK2-201ENST00000340157 ICAM1P05362 532 aa24.02■■□□□ 1.44
VRK2-201ENST00000340157 MAP3K9P80192 1104 aa24.02■■□□□ 1.44
VRK2-201ENST00000340157 CDCA5Q96FF9 252 aa24.02■■□□□ 1.44
VRK2-201ENST00000340157 SLC38A10Q9HBR0 1119 aa24.02■■□□□ 1.44
VRK2-201ENST00000340157 CBX8Q9HC52 389 aa24.02■■□□□ 1.44
VRK2-201ENST00000340157 RBBP6Q7Z6E9 1792 aaKnown RBP24.02■■□□□ 1.44
VRK2-201ENST00000340157 TRAF1Q13077 416 aa24.01■■□□□ 1.43
VRK2-201ENST00000340157 CALCRLQ16602 461 aa24.01■■□□□ 1.43
VRK2-201ENST00000340157 SLFN14P0C7P3 912 aa24■■□□□ 1.43
VRK2-201ENST00000340157 POSTNQ15063 836 aa24■■□□□ 1.43
VRK2-201ENST00000340157 UVSSAQ2YD98 709 aa24■■□□□ 1.43
VRK2-201ENST00000340157 SH3RF1Q7Z6J0 888 aa24■■□□□ 1.43
VRK2-201ENST00000340157 WNK4Q96J92 1243 aa24■■□□□ 1.43
VRK2-201ENST00000340157 MBOAT7Q96N66 472 aa24■■□□□ 1.43
VRK2-201ENST00000340157 DDX25Q9UHL0 483 aaKnown RBP24■■□□□ 1.43
VRK2-201ENST00000340157 ABCB11O95342 1321 aa24■■□□□ 1.43
VRK2-201ENST00000340157 C19orf81C9J6K1 198 aa24■■□□□ 1.43
VRK2-201ENST00000340157 BIN1O00499 593 aa24■■□□□ 1.43
VRK2-201ENST00000340157 SREBF1P36956 1147 aa24■■□□□ 1.43
VRK2-201ENST00000340157 USP11P51784 963 aa24■■□□□ 1.43
VRK2-201ENST00000340157 ARHGAP4P98171 946 aa24■■□□□ 1.43
VRK2-201ENST00000340157 DPCR1Q3MIW9 517 aa24■■□□□ 1.43
VRK2-201ENST00000340157 LUZP1Q86V48 1076 aa24■■□□□ 1.43
VRK2-201ENST00000340157 CNKSR2Q8WXI2 1034 aa24■■□□□ 1.43
VRK2-201ENST00000340157 HAS1Q92839 578 aa24■■□□□ 1.43
VRK2-201ENST00000340157 MRPL11Q9Y3B7 192 aaKnown RBP24■■□□□ 1.43
VRK2-201ENST00000340157 PCDHA5Q9Y5H7 936 aa24■■□□□ 1.43
VRK2-201ENST00000340157 FOSP01100 380 aaPredicted RBP23.99■■□□□ 1.43
VRK2-201ENST00000340157 GCFC2P16383 781 aaKnown RBP23.99■■□□□ 1.43
VRK2-201ENST00000340157 MCTP2Q6DN12 878 aa23.99■■□□□ 1.43
VRK2-201ENST00000340157 PDXDC2PQ6P474 469 aa23.99■■□□□ 1.43
VRK2-201ENST00000340157 IGSF22Q8N9C0 903 aa23.99■■□□□ 1.43
VRK2-201ENST00000340157 ANO10Q9NW15 660 aa23.99■■□□□ 1.43
VRK2-201ENST00000340157 CCPG1Q9ULG6 757 aa23.99■■□□□ 1.43
VRK2-201ENST00000340157 CYP3A7-CYP3A51PA0A087WV96 503 aa23.98■■□□□ 1.43
VRK2-201ENST00000340157 SPDYE3A6NKU9 549 aa23.98■■□□□ 1.43
VRK2-201ENST00000340157 PPP1R12BO60237 982 aaPredicted RBP23.98■■□□□ 1.43
VRK2-201ENST00000340157 CFBP00751 764 aa23.98■■□□□ 1.43
VRK2-201ENST00000340157 CYP3A7P24462 503 aa23.98■■□□□ 1.43
VRK2-201ENST00000340157 TECP42680 631 aa23.98■■□□□ 1.43
VRK2-201ENST00000340157 TXKP42681 527 aa23.98■■□□□ 1.43
VRK2-201ENST00000340157 ZNF165P49910 485 aa23.98■■□□□ 1.43
VRK2-201ENST00000340157 KARSQ15046 597 aaKnown RBP23.98■■□□□ 1.43
VRK2-201ENST00000340157 EAPPQ56P03 285 aaPredicted RBP23.98■■□□□ 1.43
VRK2-201ENST00000340157 MOB2Q70IA6 237 aa23.98■■□□□ 1.43
VRK2-201ENST00000340157 CCSER1Q9C0I3 900 aa23.98■■□□□ 1.43
VRK2-201ENST00000340157 TEX2Q8IWB9 1127 aa23.98■■□□□ 1.43
VRK2-201ENST00000340157 LRRC15Q8TF66 581 aa23.98■■□□□ 1.43
VRK2-201ENST00000340157 CLEC4DQ8WXI8 215 aa23.98■■□□□ 1.43
VRK2-201ENST00000340157 GJA10Q969M2 543 aa23.98■■□□□ 1.43
VRK2-201ENST00000340157 ATG4CQ96DT6 458 aa23.98■■□□□ 1.43
VRK2-201ENST00000340157 PAGE5Q96GU1 130 aa23.98■■□□□ 1.43
VRK2-201ENST00000340157 RAVER2Q9HCJ3 691 aaKnown RBP23.98■■□□□ 1.43
VRK2-201ENST00000340157 LOC285556D6RIA3 1793 aa23.97■■□□□ 1.43
VRK2-201ENST00000340157 IQCA1LA6NCM1 817 aa23.97■■□□□ 1.43
VRK2-201ENST00000340157 FXR2P51116 673 aaKnown RBP eCLIP23.97■■□□□ 1.43
VRK2-201ENST00000340157 NLRP12P59046 1061 aa23.97■■□□□ 1.43
VRK2-201ENST00000340157 IQCB1Q15051 598 aa23.97■■□□□ 1.43
VRK2-201ENST00000340157 NAALADL2Q58DX5 795 aa23.97■■□□□ 1.43
VRK2-201ENST00000340157 NT5DC1Q5TFE4 455 aa23.97■■□□□ 1.43
VRK2-201ENST00000340157 MOXD1Q6UVY6 613 aa23.97■■□□□ 1.43
VRK2-201ENST00000340157 AK8Q96MA6 479 aa23.97■■□□□ 1.43
VRK2-201ENST00000340157 MTRQ99707 1265 aa23.97■■□□□ 1.43
VRK2-201ENST00000340157 MMTAG2Q9BU76 263 aaKnown RBP23.97■■□□□ 1.43
VRK2-201ENST00000340157 DISC1Q9NRI5 854 aa23.97■■□□□ 1.43
VRK2-201ENST00000340157 USP25Q9UHP3 1055 aa23.97■■□□□ 1.43
VRK2-201ENST00000340157 GCOM1H8Y6P7 765 aaPredicted RBP23.96■■□□□ 1.43
VRK2-201ENST00000340157 VWA5AO00534 786 aa23.96■■□□□ 1.43
VRK2-201ENST00000340157 POLR2MP0CAP2 368 aa23.96■■□□□ 1.43
VRK2-201ENST00000340157 SARSP49591 514 aaKnown RBP23.96■■□□□ 1.43
VRK2-201ENST00000340157 SH3D19Q5HYK7 790 aa23.96■■□□□ 1.43
VRK2-201ENST00000340157 ISM2Q6H9L7 571 aa23.96■■□□□ 1.43
VRK2-201ENST00000340157 KANK3Q6NY19 840 aa23.96■■□□□ 1.43
VRK2-201ENST00000340157 FCHSD1Q86WN1 690 aa23.96■■□□□ 1.43
VRK2-201ENST00000340157 CPXCR1Q8N123 301 aa23.96■■□□□ 1.43
VRK2-201ENST00000340157 IQUBQ8NA54 791 aa23.96■■□□□ 1.43
VRK2-201ENST00000340157 SPATA20Q8TB22 786 aa23.96■■□□□ 1.43
VRK2-201ENST00000340157 NFIBO00712 420 aa23.96■■□□□ 1.43
VRK2-201ENST00000340157 CAVIN2O95810 425 aa23.96■■□□□ 1.43
VRK2-201ENST00000340157 POTEIP0CG38 1075 aa23.96■■□□□ 1.43
VRK2-201ENST00000340157 POTEJP0CG39 1038 aa23.96■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms