RNA–Protein interactions for RNA: ENST00000339255.2

NIPAL3-202, Transcript of NIPA like domain containing 3, humanhuman

TSL 5 BASIC

Gene NIPAL3, Length 1,676 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-202ENST00000339255 YEATS4O95619 227 aa16.59■□□□□ 0.25
NIPAL3-202ENST00000339255 CFBP00751 764 aa16.59■□□□□ 0.25
NIPAL3-202ENST00000339255 NASPP49321 788 aaPredicted RBP16.59■□□□□ 0.25
NIPAL3-202ENST00000339255 CCNA1P78396 465 aa16.59■□□□□ 0.25
NIPAL3-202ENST00000339255 ORC2Q13416 577 aaPredicted RBP16.59■□□□□ 0.25
NIPAL3-202ENST00000339255 UBE2SQ16763 222 aa16.59■□□□□ 0.25
NIPAL3-202ENST00000339255 JAKMIP3Q5VZ66 844 aa16.59■□□□□ 0.25
NIPAL3-202ENST00000339255 USP17L6PQ6QN14 398 aa16.59■□□□□ 0.25
NIPAL3-202ENST00000339255 NAP1L4Q99733 375 aaKnown RBP16.59■□□□□ 0.25
NIPAL3-202ENST00000339255 PAGR1Q9BTK6 254 aa16.59■□□□□ 0.25
NIPAL3-202ENST00000339255 BTBD7Q9P203 1132 aa16.59■□□□□ 0.25
NIPAL3-202ENST00000339255 CEP131Q9UPN4 1083 aa16.59■□□□□ 0.25
NIPAL3-202ENST00000339255 CNPY2Q9Y2B0 182 aa16.59■□□□□ 0.25
NIPAL3-202ENST00000339255 ELP1O95163 1332 aa16.58■□□□□ 0.25
NIPAL3-202ENST00000339255 ADAMTS3O15072 1205 aa16.58■□□□□ 0.24
NIPAL3-202ENST00000339255 CYP2C8P10632 490 aa16.58■□□□□ 0.24
NIPAL3-202ENST00000339255 TAL1P17542 331 aaPredicted RBP16.58■□□□□ 0.24
NIPAL3-202ENST00000339255 EARS2Q5JPH6 523 aaKnown RBP16.58■□□□□ 0.24
NIPAL3-202ENST00000339255 ANO1Q5XXA6 986 aa16.58■□□□□ 0.24
NIPAL3-202ENST00000339255 POTEEQ6S8J3 1075 aa16.58■□□□□ 0.24
NIPAL3-202ENST00000339255 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.58■□□□□ 0.24
NIPAL3-202ENST00000339255 NEK8Q86SG6 692 aa16.58■□□□□ 0.24
NIPAL3-202ENST00000339255 TMEM87AQ8NBN3 555 aa16.58■□□□□ 0.24
NIPAL3-202ENST00000339255 SPATA32Q96LK8 384 aa16.58■□□□□ 0.24
NIPAL3-202ENST00000339255 USP28Q96RU2 1077 aa16.58■□□□□ 0.24
NIPAL3-202ENST00000339255 RBPJLQ9UBG7 517 aa16.58■□□□□ 0.24
NIPAL3-202ENST00000339255 PFASO15067 1338 aa16.58■□□□□ 0.24
NIPAL3-202ENST00000339255 FAM205CA6NFA0 338 aa16.57■□□□□ 0.24
NIPAL3-202ENST00000339255 FIBPO43427 364 aa16.57■□□□□ 0.24
NIPAL3-202ENST00000339255 MCM4P33991 863 aa16.57■□□□□ 0.24
NIPAL3-202ENST00000339255 TOB1P50616 345 aaPredicted RBP16.57■□□□□ 0.24
NIPAL3-202ENST00000339255 INF2Q27J81 1249 aa16.57■□□□□ 0.24
NIPAL3-202ENST00000339255 DEFB115Q30KQ5 88 aa16.57■□□□□ 0.24
NIPAL3-202ENST00000339255 MUM1L1Q5H9M0 696 aa16.57■□□□□ 0.24
NIPAL3-202ENST00000339255 TTC38Q5R3I4 469 aa16.57■□□□□ 0.24
NIPAL3-202ENST00000339255 IFNL1Q8IU54 200 aa16.57■□□□□ 0.24
NIPAL3-202ENST00000339255 SHCBP1Q8NEM2 672 aa16.57■□□□□ 0.24
NIPAL3-202ENST00000339255 GPRC5AQ8NFJ5 357 aa16.57■□□□□ 0.24
NIPAL3-202ENST00000339255 KCNG4Q8TDN1 519 aa16.57■□□□□ 0.24
NIPAL3-202ENST00000339255 TBCKQ8TEA7 893 aa16.57■□□□□ 0.24
NIPAL3-202ENST00000339255 ANO3Q9BYT9 981 aa16.57■□□□□ 0.24
NIPAL3-202ENST00000339255 TMEM260Q9NX78 707 aa16.57■□□□□ 0.24
NIPAL3-202ENST00000339255 TFIP11Q9UBB9 837 aaKnown RBP16.57■□□□□ 0.24
NIPAL3-202ENST00000339255 MORF4L1Q9UBU8 362 aa16.57■□□□□ 0.24
NIPAL3-202ENST00000339255 RIPK3Q9Y572 518 aa16.57■□□□□ 0.24
NIPAL3-202ENST00000339255 MORC2Q9Y6X9 1032 aaPredicted RBP16.57■□□□□ 0.24
NIPAL3-202ENST00000339255 IGF2BP3O00425 579 aaKnown RBP eCLIP16.56■□□□□ 0.24
NIPAL3-202ENST00000339255 CNMDO75829 334 aa16.56■□□□□ 0.24
NIPAL3-202ENST00000339255 HOXA13P31271 388 aaPredicted RBP16.56■□□□□ 0.24
NIPAL3-202ENST00000339255 TM4SF4P48230 202 aa16.56■□□□□ 0.24
NIPAL3-202ENST00000339255 ERVK-9P63128 1117 aa16.56■□□□□ 0.24
NIPAL3-202ENST00000339255 ERVK-24P63145 666 aa16.56■□□□□ 0.24
NIPAL3-202ENST00000339255 RNF207Q6ZRF8 634 aa16.56■□□□□ 0.24
NIPAL3-202ENST00000339255 JMYQ8N9B5 988 aa16.56■□□□□ 0.24
NIPAL3-202ENST00000339255 CAPNS2Q96L46 248 aa16.56■□□□□ 0.24
NIPAL3-202ENST00000339255 MOV10L1Q9BXT6 1211 aaKnown RBP16.56■□□□□ 0.24
NIPAL3-202ENST00000339255 MROH8Q9H579 483 aa16.56■□□□□ 0.24
NIPAL3-202ENST00000339255 TXNRD2Q9NNW7 524 aa16.56■□□□□ 0.24
NIPAL3-202ENST00000339255 ZNFX1Q9P2E3 1918 aaKnown RBP16.56■□□□□ 0.24
NIPAL3-202ENST00000339255 ALDH1A1P00352 501 aa16.56■□□□□ 0.24
NIPAL3-202ENST00000339255 GCFC2P16383 781 aaKnown RBP16.56■□□□□ 0.24
NIPAL3-202ENST00000339255 SREBF1P36956 1147 aa16.56■□□□□ 0.24
NIPAL3-202ENST00000339255 USP11P51784 963 aa16.56■□□□□ 0.24
NIPAL3-202ENST00000339255 STK38Q15208 465 aa16.56■□□□□ 0.24
NIPAL3-202ENST00000339255 FAM110CQ1W6H9 321 aa16.56■□□□□ 0.24
NIPAL3-202ENST00000339255 NOM1Q5C9Z4 860 aaKnown RBP16.56■□□□□ 0.24
NIPAL3-202ENST00000339255 CYP4F22Q6NT55 531 aa16.56■□□□□ 0.24
NIPAL3-202ENST00000339255 NSMFQ6X4W1 530 aa16.56■□□□□ 0.24
NIPAL3-202ENST00000339255 LEO1Q8WVC0 666 aaPredicted RBP16.56■□□□□ 0.24
NIPAL3-202ENST00000339255 RCOR1Q9UKL0 485 aa16.56■□□□□ 0.24
NIPAL3-202ENST00000339255 LCTP09848 1927 aa16.55■□□□□ 0.24
NIPAL3-202ENST00000339255 PLXNB2O15031 1838 aa16.55■□□□□ 0.24
NIPAL3-202ENST00000339255 RPS6P62753 249 aaKnown RBP16.55■□□□□ 0.24
NIPAL3-202ENST00000339255 SLC39A14Q15043 492 aa16.55■□□□□ 0.24
NIPAL3-202ENST00000339255 SF3A1Q15459 793 aaKnown RBP16.55■□□□□ 0.24
NIPAL3-202ENST00000339255 TAF1CQ15572 869 aaPredicted RBP16.55■□□□□ 0.24
NIPAL3-202ENST00000339255 MOXD1Q6UVY6 613 aa16.55■□□□□ 0.24
NIPAL3-202ENST00000339255 LINC00301Q8NCQ3 95 aa16.55■□□□□ 0.24
NIPAL3-202ENST00000339255 CHAMP1Q96JM3 812 aa16.55■□□□□ 0.24
NIPAL3-202ENST00000339255 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.55■□□□□ 0.24
NIPAL3-202ENST00000339255 CLIC4Q9Y696 253 aa16.55■□□□□ 0.24
NIPAL3-202ENST00000339255 THSD7BQ9C0I4 1608 aa16.54■□□□□ 0.24
NIPAL3-202ENST00000339255 LAD1O00515 517 aa16.54■□□□□ 0.24
NIPAL3-202ENST00000339255 CEBPZQ03701 1054 aaKnown RBP16.54■□□□□ 0.24
NIPAL3-202ENST00000339255 PPP4R3AQ6IN85 833 aa16.54■□□□□ 0.24
NIPAL3-202ENST00000339255 FCHSD1Q86WN1 690 aa16.54■□□□□ 0.24
NIPAL3-202ENST00000339255 NCAPG2Q86XI2 1143 aa16.54■□□□□ 0.24
NIPAL3-202ENST00000339255 ANKRD13CQ8N6S4 541 aa16.54■□□□□ 0.24
NIPAL3-202ENST00000339255 CRYGNQ8WXF5 182 aa16.54■□□□□ 0.24
NIPAL3-202ENST00000339255 FTOQ9C0B1 505 aaKnown RBP eCLIP16.54■□□□□ 0.24
NIPAL3-202ENST00000339255 A1CFQ9NQ94 594 aaKnown RBP16.54■□□□□ 0.24
NIPAL3-202ENST00000339255 CYP39A1Q9NYL5 469 aa16.54■□□□□ 0.24
NIPAL3-202ENST00000339255 PCDHB6Q9Y5E3 794 aa16.54■□□□□ 0.24
NIPAL3-202ENST00000339255 ADGRA2Q96PE1 1338 aa16.54■□□□□ 0.24
NIPAL3-202ENST00000339255 SPTLC2O15270 562 aa16.53■□□□□ 0.24
NIPAL3-202ENST00000339255 PPP6R2O75170 966 aa16.53■□□□□ 0.24
NIPAL3-202ENST00000339255 ERCC3P19447 782 aa16.53■□□□□ 0.24
NIPAL3-202ENST00000339255 ATP2B1P20020 1258 aa16.53■□□□□ 0.24
NIPAL3-202ENST00000339255 ARHGAP4P98171 946 aa16.53■□□□□ 0.24
NIPAL3-202ENST00000339255 GRM1Q13255 1194 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms