RNA–Protein interactions for RNA: ENST00000338963.6

NEDD4-201, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-201ENST00000338963 ABL2P42684 1182 aa4.54□□□□□ -1.68
NEDD4-201ENST00000338963 KRT32Q14532 448 aa4.54□□□□□ -1.68
NEDD4-201ENST00000338963 TRIM71Q2Q1W2 868 aaKnown RBP4.54□□□□□ -1.68
NEDD4-201ENST00000338963 CYP26C1Q6V0L0 522 aa4.54□□□□□ -1.68
NEDD4-201ENST00000338963 MIER3Q7Z3K6 550 aa4.54□□□□□ -1.68
NEDD4-201ENST00000338963 KRT28Q7Z3Y7 464 aa4.54□□□□□ -1.68
NEDD4-201ENST00000338963 BBOF1Q8ND07 529 aa4.54□□□□□ -1.68
NEDD4-201ENST00000338963 CDKL2Q92772 493 aa4.54□□□□□ -1.68
NEDD4-201ENST00000338963 SEC16BQ96JE7 1060 aa4.54□□□□□ -1.68
NEDD4-201ENST00000338963 HAUS7Q99871 368 aa4.54□□□□□ -1.68
NEDD4-201ENST00000338963 C10orf88Q9H8K7 445 aa4.54□□□□□ -1.68
NEDD4-201ENST00000338963 TRIM43BA6NCK2 446 aa4.54□□□□□ -1.68
NEDD4-201ENST00000338963 GOLGA8BA8MQT2 603 aa4.54□□□□□ -1.68
NEDD4-201ENST00000338963 ZNF202O95125 648 aa4.54□□□□□ -1.68
NEDD4-201ENST00000338963 PAEPP09466 180 aa4.54□□□□□ -1.68
NEDD4-201ENST00000338963 EXOSC9Q06265 439 aaKnown RBP4.54□□□□□ -1.68
NEDD4-201ENST00000338963 CDC37L1Q7L3B6 337 aa4.54□□□□□ -1.68
NEDD4-201ENST00000338963 LRRN4CLQ8ND94 238 aa4.54□□□□□ -1.68
NEDD4-201ENST00000338963 KCNG4Q8TDN1 519 aa4.54□□□□□ -1.68
NEDD4-201ENST00000338963 SLC35B4Q969S0 331 aa4.54□□□□□ -1.68
NEDD4-201ENST00000338963 EPB41L1Q9H4G0 881 aa4.54□□□□□ -1.68
NEDD4-201ENST00000338963 PREBQ9HCU5 417 aa4.54□□□□□ -1.68
NEDD4-201ENST00000338963 FKBP14Q9NWM8 211 aa4.54□□□□□ -1.68
NEDD4-201ENST00000338963 CFDP1Q9UEE9 299 aaPredicted RBP4.54□□□□□ -1.68
NEDD4-201ENST00000338963 SLC27A2O14975 620 aa4.54□□□□□ -1.68
NEDD4-201ENST00000338963 KRT14P02533 472 aa4.54□□□□□ -1.68
NEDD4-201ENST00000338963 ADARP55265 1226 aaKnown RBP4.54□□□□□ -1.68
NEDD4-201ENST00000338963 ZC3H6P61129 1189 aaKnown RBP4.54□□□□□ -1.68
NEDD4-201ENST00000338963 IRX4P78413 519 aa4.54□□□□□ -1.68
NEDD4-201ENST00000338963 TNIP1Q15025 636 aa4.54□□□□□ -1.68
NEDD4-201ENST00000338963 SPDYCQ5MJ68 293 aa4.54□□□□□ -1.68
NEDD4-201ENST00000338963 C11orf57Q6ZUT1 292 aaPredicted RBP4.54□□□□□ -1.68
NEDD4-201ENST00000338963 ZSWIM4Q9H7M6 989 aa4.54□□□□□ -1.68
NEDD4-201ENST00000338963 SLC38A10Q9HBR0 1119 aa4.54□□□□□ -1.68
NEDD4-201ENST00000338963 CNGB3Q9NQW8 809 aa4.54□□□□□ -1.68
NEDD4-201ENST00000338963 PTTG2Q9NZH5 202 aa4.54□□□□□ -1.68
NEDD4-201ENST00000338963 ANGPTL2Q9UKU9 493 aa4.54□□□□□ -1.68
NEDD4-201ENST00000338963 KDM6AO15550 1401 aaPredicted RBP4.54□□□□□ -1.68
NEDD4-201ENST00000338963 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.54□□□□□ -1.68
NEDD4-201ENST00000338963 PDGFRBP09619 1106 aa4.54□□□□□ -1.68
NEDD4-201ENST00000338963 ADAM9Q13443 819 aa4.54□□□□□ -1.68
NEDD4-201ENST00000338963 PARP6Q2NL67 630 aa4.54□□□□□ -1.68
NEDD4-201ENST00000338963 TBC1D1Q86TI0 1168 aaPredicted RBP4.54□□□□□ -1.68
NEDD4-201ENST00000338963 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.54□□□□□ -1.68
NEDD4-201ENST00000338963 GABPB2Q8TAK5 448 aaPredicted RBP4.54□□□□□ -1.68
NEDD4-201ENST00000338963 SLF1Q9BQI6 1058 aa4.54□□□□□ -1.68
NEDD4-201ENST00000338963 FAM167BQ9BTA0 163 aa4.54□□□□□ -1.68
NEDD4-201ENST00000338963 COMMD8Q9NX08 183 aa4.54□□□□□ -1.68
NEDD4-201ENST00000338963 MRPL11Q9Y3B7 192 aaKnown RBP4.54□□□□□ -1.68
NEDD4-201ENST00000338963 MYPNQ86TC9 1320 aa4.54□□□□□ -1.68
NEDD4-201ENST00000338963 TOP2BQ02880 1626 aa4.54□□□□□ -1.68
NEDD4-201ENST00000338963 NVLO15381 856 aaKnown RBP4.54□□□□□ -1.68
NEDD4-201ENST00000338963 SUN1O94901 812 aa4.54□□□□□ -1.68
NEDD4-201ENST00000338963 GSPT1P15170 499 aaKnown RBP4.54□□□□□ -1.68
NEDD4-201ENST00000338963 NOP14P78316 857 aaKnown RBP4.54□□□□□ -1.68
NEDD4-201ENST00000338963 ACCSLQ4AC99 568 aa4.54□□□□□ -1.68
NEDD4-201ENST00000338963 C3orf62Q6ZUJ4 267 aa4.54□□□□□ -1.68
NEDD4-201ENST00000338963 TERB1Q8NA31 727 aa4.54□□□□□ -1.68
NEDD4-201ENST00000338963 SUN5Q8TC36 379 aa4.54□□□□□ -1.68
NEDD4-201ENST00000338963 FAM129AQ9BZQ8 928 aa4.54□□□□□ -1.68
NEDD4-201ENST00000338963 IFT122Q9HBG6 1241 aa4.54□□□□□ -1.68
NEDD4-201ENST00000338963 AS3MTQ9HBK9 375 aa4.54□□□□□ -1.68
NEDD4-201ENST00000338963 N6AMT1Q9Y5N5 214 aa4.54□□□□□ -1.68
NEDD4-201ENST00000338963 ZC3H11AO75152 810 aaKnown RBP eCLIP4.54□□□□□ -1.68
NEDD4-201ENST00000338963 TCP1P17987 556 aaKnown RBP4.54□□□□□ -1.68
NEDD4-201ENST00000338963 PCYT1AP49585 367 aa4.54□□□□□ -1.68
NEDD4-201ENST00000338963 TBL3Q12788 808 aaKnown RBP4.54□□□□□ -1.68
NEDD4-201ENST00000338963 RRS1Q15050 365 aaKnown RBP4.54□□□□□ -1.68
NEDD4-201ENST00000338963 SYCP2LQ5T4T6 812 aa4.54□□□□□ -1.68
NEDD4-201ENST00000338963 TRIM68Q6AZZ1 485 aa4.54□□□□□ -1.68
NEDD4-201ENST00000338963 GALNT17Q6IS24 598 aa4.54□□□□□ -1.68
NEDD4-201ENST00000338963 VPS36Q86VN1 386 aa4.54□□□□□ -1.68
NEDD4-201ENST00000338963 GIPC2Q8TF65 315 aa4.54□□□□□ -1.68
NEDD4-201ENST00000338963 SSH1Q8WYL5 1049 aa4.54□□□□□ -1.68
NEDD4-201ENST00000338963 ZNF570Q96NI8 536 aa4.54□□□□□ -1.68
NEDD4-201ENST00000338963 TANGO6Q9C0B7 1094 aa4.54□□□□□ -1.68
NEDD4-201ENST00000338963 DLGAP2Q9P1A6 1054 aa4.54□□□□□ -1.68
NEDD4-201ENST00000338963 HESX1Q9UBX0 185 aa4.54□□□□□ -1.68
NEDD4-201ENST00000338963 STK17AQ9UEE5 414 aa4.54□□□□□ -1.68
NEDD4-201ENST00000338963 FANCAO15360 1455 aa4.53□□□□□ -1.68
NEDD4-201ENST00000338963 DPPA5A6NC42 116 aa4.53□□□□□ -1.68
NEDD4-201ENST00000338963 PPIP5K2O43314 1243 aa4.53□□□□□ -1.68
NEDD4-201ENST00000338963 DIAPH1O60610 1272 aaKnown RBP4.53□□□□□ -1.68
NEDD4-201ENST00000338963 SUPT3HO75486 399 aa4.53□□□□□ -1.68
NEDD4-201ENST00000338963 ITGA2BP08514 1039 aa4.53□□□□□ -1.68
NEDD4-201ENST00000338963 KCNA3P22001 575 aa4.53□□□□□ -1.68
NEDD4-201ENST00000338963 GSTM4Q03013 218 aa4.53□□□□□ -1.68
NEDD4-201ENST00000338963 DNAJC3Q13217 504 aa4.53□□□□□ -1.68
NEDD4-201ENST00000338963 XPO6Q96QU8 1125 aaKnown RBP4.53□□□□□ -1.68
NEDD4-201ENST00000338963 WDR24Q96S15 920 aa4.53□□□□□ -1.68
NEDD4-201ENST00000338963 PPP1R12CQ9BZL4 782 aa4.53□□□□□ -1.68
NEDD4-201ENST00000338963 DHX36Q9H2U1 1008 aaKnown RBP4.53□□□□□ -1.68
NEDD4-201ENST00000338963 DIABLOQ9NR28 239 aa4.53□□□□□ -1.68
NEDD4-201ENST00000338963 GOLGA8MH3BSY2 632 aa4.53□□□□□ -1.68
NEDD4-201ENST00000338963 TRPA1O75762 1119 aa4.53□□□□□ -1.68
NEDD4-201ENST00000338963 APOEP02649 317 aa4.53□□□□□ -1.68
NEDD4-201ENST00000338963 HMOX2P30519 316 aa4.53□□□□□ -1.68
NEDD4-201ENST00000338963 MAGEA10P43363 369 aaPredicted RBP4.53□□□□□ -1.68
NEDD4-201ENST00000338963 TNNI2P48788 182 aa4.53□□□□□ -1.68
NEDD4-201ENST00000338963 CACNA2D1P54289 1103 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms