RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 CDC37Q16543 378 aaPredicted RBP6.97□□□□□ -1.29
PRKDC-202ENST00000338368 FMNL3Q8IVF7 1028 aa6.97□□□□□ -1.29
PRKDC-202ENST00000338368 RTKN2Q8IZC4 609 aa6.97□□□□□ -1.29
PRKDC-202ENST00000338368 CTNNBL1Q8WYA6 563 aaPredicted RBP6.97□□□□□ -1.29
PRKDC-202ENST00000338368 B4DLN1 442 aa6.97□□□□□ -1.29
PRKDC-202ENST00000338368 NEFHP12036 1026 aa6.97□□□□□ -1.29
PRKDC-202ENST00000338368 GYS1P13807 737 aa6.97□□□□□ -1.29
PRKDC-202ENST00000338368 GTF2F1P35269 517 aaKnown RBP eCLIP6.97□□□□□ -1.29
PRKDC-202ENST00000338368 COL9A3Q14050 684 aaPredicted RBP6.97□□□□□ -1.29
PRKDC-202ENST00000338368 METTL16Q86W50 562 aaKnown RBP6.97□□□□□ -1.29
PRKDC-202ENST00000338368 PLVAPQ9BX97 442 aa6.97□□□□□ -1.29
PRKDC-202ENST00000338368 NLRX1Q86UT6 975 aa6.97□□□□□ -1.29
PRKDC-202ENST00000338368 ANKRD13CQ8N6S4 541 aa6.97□□□□□ -1.29
PRKDC-202ENST00000338368 ANO3Q9BYT9 981 aa6.97□□□□□ -1.29
PRKDC-202ENST00000338368 TAOK3Q9H2K8 898 aa6.97□□□□□ -1.29
PRKDC-202ENST00000338368 RABGAP1Q9Y3P9 1069 aa6.97□□□□□ -1.29
PRKDC-202ENST00000338368 USP17L15C9J2P7 530 aa6.97□□□□□ -1.29
PRKDC-202ENST00000338368 USP17L13C9JLJ4 530 aa6.97□□□□□ -1.29
PRKDC-202ENST00000338368 USP17L11C9JVI0 530 aa6.97□□□□□ -1.29
PRKDC-202ENST00000338368 USP17L18D6R9N7 530 aa6.97□□□□□ -1.29
PRKDC-202ENST00000338368 USP17L22D6RA61 530 aa6.97□□□□□ -1.29
PRKDC-202ENST00000338368 USP17L17D6RBQ6 530 aa6.97□□□□□ -1.29
PRKDC-202ENST00000338368 USP17L19D6RCP7 530 aa6.97□□□□□ -1.29
PRKDC-202ENST00000338368 USP17L20D6RJB6 530 aa6.97□□□□□ -1.29
PRKDC-202ENST00000338368 ZBTB5O15062 677 aa6.97□□□□□ -1.29
PRKDC-202ENST00000338368 LMAN1P49257 510 aa6.97□□□□□ -1.29
PRKDC-202ENST00000338368 USP17L24Q0WX57 530 aa6.97□□□□□ -1.29
PRKDC-202ENST00000338368 USP17L6PQ6QN14 398 aa6.97□□□□□ -1.29
PRKDC-202ENST00000338368 C3orf67Q6ZVT6 689 aa6.97□□□□□ -1.29
PRKDC-202ENST00000338368 CNKSR2Q8WXI2 1034 aa6.97□□□□□ -1.29
PRKDC-202ENST00000338368 SPZ1Q9BXG8 430 aa6.97□□□□□ -1.29
PRKDC-202ENST00000338368 TCRBV5S4A2TA0A5A2 114 aa6.97□□□□□ -1.29
PRKDC-202ENST00000338368 PPP4CP60510 307 aa6.97□□□□□ -1.29
PRKDC-202ENST00000338368 TMEM260Q9NX78 707 aa6.97□□□□□ -1.29
PRKDC-202ENST00000338368 CCPG1Q9ULG6 757 aa6.97□□□□□ -1.29
PRKDC-202ENST00000338368 GH2P01242 217 aa6.97□□□□□ -1.29
PRKDC-202ENST00000338368 PRPHP41219 470 aa6.97□□□□□ -1.29
PRKDC-202ENST00000338368 NTRK3Q16288 839 aa6.97□□□□□ -1.29
PRKDC-202ENST00000338368 DCAF15Q66K64 600 aa6.97□□□□□ -1.29
PRKDC-202ENST00000338368 TESPA1A2RU30 521 aaPredicted RBP6.96□□□□□ -1.29
PRKDC-202ENST00000338368 FBXL16Q8N461 479 aa6.96□□□□□ -1.29
PRKDC-202ENST00000338368 IFT81Q8WYA0 676 aa6.96□□□□□ -1.29
PRKDC-202ENST00000338368 KIF20BQ96Q89 1820 aa6.96□□□□□ -1.29
PRKDC-202ENST00000338368 XRCC5P13010 732 aaKnown RBP6.96□□□□□ -1.29
PRKDC-202ENST00000338368 SFMBT2Q5VUG0 894 aa6.96□□□□□ -1.29
PRKDC-202ENST00000338368 SMCR8Q8TEV9 937 aaPredicted RBP6.96□□□□□ -1.29
PRKDC-202ENST00000338368 PSMB7Q99436 277 aa6.96□□□□□ -1.29
PRKDC-202ENST00000338368 KAT6AQ92794 2004 aa6.96□□□□□ -1.29
PRKDC-202ENST00000338368 ECE2O60344 883 aa6.96□□□□□ -1.29
PRKDC-202ENST00000338368 IBSPP21815 317 aaPredicted RBP6.96□□□□□ -1.29
PRKDC-202ENST00000338368 MIGA2Q7L4E1 593 aa6.96□□□□□ -1.29
PRKDC-202ENST00000338368 FNBP1Q96RU3 617 aa6.96□□□□□ -1.29
PRKDC-202ENST00000338368 SUGT1Q9Y2Z0 365 aa6.96□□□□□ -1.29
PRKDC-202ENST00000338368 RASA1P20936 1047 aa6.96□□□□□ -1.3
PRKDC-202ENST00000338368 KMT5BQ4FZB7 885 aa6.96□□□□□ -1.3
PRKDC-202ENST00000338368 FAM212AQ96EL1 285 aa6.96□□□□□ -1.3
PRKDC-202ENST00000338368 BPIFA3Q9BQP9 254 aa6.96□□□□□ -1.3
PRKDC-202ENST00000338368 CCDC113Q9H0I3 377 aa6.96□□□□□ -1.3
PRKDC-202ENST00000338368 SHTN1A0MZ66 631 aa6.96□□□□□ -1.3
PRKDC-202ENST00000338368 F5H6K3 240 aa6.96□□□□□ -1.3
PRKDC-202ENST00000338368 KLRC3Q07444 240 aa6.96□□□□□ -1.3
PRKDC-202ENST00000338368 SYDE2Q5VT97 1194 aa6.96□□□□□ -1.3
PRKDC-202ENST00000338368 EMILIN3Q9NT22 766 aa6.96□□□□□ -1.3
PRKDC-202ENST00000338368 EEF2P13639 858 aaKnown RBP6.96□□□□□ -1.3
PRKDC-202ENST00000338368 AKR1B1P15121 316 aa6.96□□□□□ -1.3
PRKDC-202ENST00000338368 VAV2P52735 878 aa6.96□□□□□ -1.3
PRKDC-202ENST00000338368 FKBP3Q00688 224 aaKnown RBP6.96□□□□□ -1.3
PRKDC-202ENST00000338368 GRIN1Q05586 938 aa6.96□□□□□ -1.3
PRKDC-202ENST00000338368 AP3B2Q13367 1082 aa6.96□□□□□ -1.3
PRKDC-202ENST00000338368 IFIH1Q9BYX4 1025 aaKnown RBP6.96□□□□□ -1.3
PRKDC-202ENST00000338368 MTMR4Q9NYA4 1195 aa6.96□□□□□ -1.3
PRKDC-202ENST00000338368 USP17L10C9JJH3 530 aa6.96□□□□□ -1.3
PRKDC-202ENST00000338368 GNPTABQ3T906 1256 aa6.96□□□□□ -1.3
PRKDC-202ENST00000338368 MAATS1Q7Z4T9 603 aa6.96□□□□□ -1.3
PRKDC-202ENST00000338368 TNFAIP3P21580 790 aa6.96□□□□□ -1.3
PRKDC-202ENST00000338368 TNNC1P63316 161 aa6.96□□□□□ -1.3
PRKDC-202ENST00000338368 RGS22Q8NE09 1264 aa6.96□□□□□ -1.3
PRKDC-202ENST00000338368 FUCA2Q9BTY2 467 aa6.96□□□□□ -1.3
PRKDC-202ENST00000338368 SAR1BQ9Y6B6 198 aa6.96□□□□□ -1.3
PRKDC-202ENST00000338368 HSF2BPO75031 334 aa6.96□□□□□ -1.3
PRKDC-202ENST00000338368 SNAP25P60880 206 aa6.96□□□□□ -1.3
PRKDC-202ENST00000338368 DDX12PQ92771 950 aa6.96□□□□□ -1.3
PRKDC-202ENST00000338368 NOX5Q96PH1 765 aa6.96□□□□□ -1.3
PRKDC-202ENST00000338368 NDST4Q9H3R1 872 aa6.96□□□□□ -1.3
PRKDC-202ENST00000338368 METTL14Q9HCE5 456 aaKnown RBP6.96□□□□□ -1.3
PRKDC-202ENST00000338368 PCDHA6Q9UN73 950 aa6.96□□□□□ -1.3
PRKDC-202ENST00000338368 PCDHA8Q9Y5H6 950 aa6.96□□□□□ -1.3
PRKDC-202ENST00000338368 EFCAB8A8MWE9 144 aa6.96□□□□□ -1.3
PRKDC-202ENST00000338368 KIAA0754O94854 1291 aa6.96□□□□□ -1.3
PRKDC-202ENST00000338368 CTNNA2P26232 953 aa6.96□□□□□ -1.3
PRKDC-202ENST00000338368 MAN2A1Q16706 1144 aa6.96□□□□□ -1.3
PRKDC-202ENST00000338368 AOC3Q16853 763 aa6.96□□□□□ -1.3
PRKDC-202ENST00000338368 ARHGAP44Q17R89 818 aa6.96□□□□□ -1.3
PRKDC-202ENST00000338368 TTBK2Q6IQ55 1244 aa6.95□□□□□ -1.3
PRKDC-202ENST00000338368 RCSD1Q6JBY9 416 aa6.95□□□□□ -1.3
PRKDC-202ENST00000338368 ADGRA1Q86SQ6 560 aa6.95□□□□□ -1.3
PRKDC-202ENST00000338368 GPR161Q8N6U8 529 aaKnown RBP6.95□□□□□ -1.3
PRKDC-202ENST00000338368 BCCIPQ9P287 314 aaKnown RBP eCLIP6.95□□□□□ -1.3
PRKDC-202ENST00000338368 EXOC7Q9UPT5 735 aa6.95□□□□□ -1.3
PRKDC-202ENST00000338368 HMGB3O15347 200 aaKnown RBP6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms