RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 HEXIM1O94992 359 aaKnown RBP17.61■□□□□ 0.41
NPHP3-201ENST00000337331 POLA2Q14181 598 aa17.61■□□□□ 0.41
NPHP3-201ENST00000337331 PDCD2Q16342 344 aaPredicted RBP17.61■□□□□ 0.41
NPHP3-201ENST00000337331 RAD9BQ6WBX8 426 aa17.61■□□□□ 0.41
NPHP3-201ENST00000337331 INTS8Q75QN2 995 aaKnown RBP17.61■□□□□ 0.41
NPHP3-201ENST00000337331 MAEAQ7L5Y9 396 aa17.61■□□□□ 0.41
NPHP3-201ENST00000337331 DNM3Q9UQ16 869 aa17.61■□□□□ 0.41
NPHP3-201ENST00000337331 USP6P35125 1406 aa17.61■□□□□ 0.41
NPHP3-201ENST00000337331 APBA1Q02410 837 aa17.61■□□□□ 0.41
NPHP3-201ENST00000337331 NAA35Q5VZE5 725 aa17.61■□□□□ 0.41
NPHP3-201ENST00000337331 OSBP2Q969R2 916 aa17.61■□□□□ 0.41
NPHP3-201ENST00000337331 NAP1L3Q99457 506 aaPredicted RBP17.61■□□□□ 0.41
NPHP3-201ENST00000337331 STIM2Q9P246 746 aa17.61■□□□□ 0.41
NPHP3-201ENST00000337331 BIN2Q9UBW5 565 aaPredicted RBP17.61■□□□□ 0.41
NPHP3-201ENST00000337331 GMNCA6NCL1 334 aa17.61■□□□□ 0.41
NPHP3-201ENST00000337331 SCG2P13521 617 aa17.61■□□□□ 0.41
NPHP3-201ENST00000337331 CDC25CP30307 473 aa17.61■□□□□ 0.41
NPHP3-201ENST00000337331 DIXDC1Q155Q3 683 aa17.61■□□□□ 0.41
NPHP3-201ENST00000337331 GLT8D2Q9H1C3 349 aa17.61■□□□□ 0.41
NPHP3-201ENST00000337331 ARPP21Q9UBL0 812 aaPredicted RBP17.61■□□□□ 0.41
NPHP3-201ENST00000337331 MFAP3LO75121 409 aa17.6■□□□□ 0.41
NPHP3-201ENST00000337331 NDUFA10O95299 355 aa17.6■□□□□ 0.41
NPHP3-201ENST00000337331 CYP27A1Q02318 531 aa17.6■□□□□ 0.41
NPHP3-201ENST00000337331 SETDB1Q15047 1291 aa17.6■□□□□ 0.41
NPHP3-201ENST00000337331 ZYXQ15942 572 aaKnown RBP17.6■□□□□ 0.41
NPHP3-201ENST00000337331 RBM17Q96I25 401 aaKnown RBP17.6■□□□□ 0.41
NPHP3-201ENST00000337331 ACTN4O43707 911 aaKnown RBP17.6■□□□□ 0.41
NPHP3-201ENST00000337331 STAMBPO95630 424 aa17.6■□□□□ 0.41
NPHP3-201ENST00000337331 DNM2P50570 870 aa17.6■□□□□ 0.41
NPHP3-201ENST00000337331 HDLBPQ00341 1268 aaKnown RBP17.6■□□□□ 0.41
NPHP3-201ENST00000337331 GPKOWQ92917 476 aaPredicted RBP eCLIP17.6■□□□□ 0.41
NPHP3-201ENST00000337331 SLAIN2Q9P270 581 aa17.6■□□□□ 0.41
NPHP3-201ENST00000337331 SERPINA10Q9UK55 444 aa17.6■□□□□ 0.41
NPHP3-201ENST00000337331 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.6■□□□□ 0.41
NPHP3-201ENST00000337331 CCDC169A6NNP5 214 aa17.6■□□□□ 0.41
NPHP3-201ENST00000337331 CPP00450 1065 aa17.6■□□□□ 0.41
NPHP3-201ENST00000337331 RPS6KA1Q15418 735 aa17.6■□□□□ 0.41
NPHP3-201ENST00000337331 EMBQ6PCB8 327 aa17.6■□□□□ 0.41
NPHP3-201ENST00000337331 ZNF365Q70YC5 407 aa17.6■□□□□ 0.41
NPHP3-201ENST00000337331 OSBPL9Q96SU4 736 aa17.6■□□□□ 0.41
NPHP3-201ENST00000337331 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.6■□□□□ 0.417e-7■■■□□ 17.7
NPHP3-201ENST00000337331 NOVA2Q9UNW9 492 aaKnown RBP17.6■□□□□ 0.41
NPHP3-201ENST00000337331 ESYT3A0FGR9 886 aa17.59■□□□□ 0.41
NPHP3-201ENST00000337331 ARHGEF35A5YM69 484 aa17.59■□□□□ 0.41
NPHP3-201ENST00000337331 PREPLQ4J6C6 727 aaPredicted RBP17.59■□□□□ 0.41
NPHP3-201ENST00000337331 SFMBT2Q5VUG0 894 aa17.59■□□□□ 0.41
NPHP3-201ENST00000337331 CCNI2Q6ZMN8 369 aaPredicted RBP17.59■□□□□ 0.41
NPHP3-201ENST00000337331 DAAM2Q86T65 1068 aa17.59■□□□□ 0.41
NPHP3-201ENST00000337331 ENOX1Q8TC92 643 aaKnown RBP17.59■□□□□ 0.41
NPHP3-201ENST00000337331 SYMPKQ92797 1274 aaKnown RBP17.59■□□□□ 0.41
NPHP3-201ENST00000337331 MAN1B1Q9UKM7 699 aa17.59■□□□□ 0.41
NPHP3-201ENST00000337331 ASAP1Q9ULH1 1129 aa17.59■□□□□ 0.41
NPHP3-201ENST00000337331 HYOU1Q9Y4L1 999 aa17.59■□□□□ 0.41
NPHP3-201ENST00000337331 ARHGAP31Q2M1Z3 1444 aa17.59■□□□□ 0.41
NPHP3-201ENST00000337331 H7C1D1 291 aa17.59■□□□□ 0.41
NPHP3-201ENST00000337331 EVI5O60447 810 aa17.59■□□□□ 0.41
NPHP3-201ENST00000337331 HARSP12081 509 aaKnown RBP17.59■□□□□ 0.41
NPHP3-201ENST00000337331 KRT5P13647 590 aa17.59■□□□□ 0.41
NPHP3-201ENST00000337331 TECP42680 631 aa17.59■□□□□ 0.41
NPHP3-201ENST00000337331 KIF23Q02241 960 aaPredicted RBP17.59■□□□□ 0.41
NPHP3-201ENST00000337331 TCP10Q12799 353 aa17.59■□□□□ 0.41
NPHP3-201ENST00000337331 MIPOL1Q8TD10 442 aa17.59■□□□□ 0.41
NPHP3-201ENST00000337331 FAM114A2Q9NRY5 505 aa17.59■□□□□ 0.41
NPHP3-201ENST00000337331 VIRMAQ69YN4 1812 aaKnown RBP17.59■□□□□ 0.41
NPHP3-201ENST00000337331 FLOT1O75955 427 aa17.59■□□□□ 0.41
NPHP3-201ENST00000337331 GOLGA8HP0CJ92 632 aa17.59■□□□□ 0.41
NPHP3-201ENST00000337331 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.59■□□□□ 0.41
NPHP3-201ENST00000337331 FAM170AA1A519 330 aa17.58■□□□□ 0.41
NPHP3-201ENST00000337331 KLRF2D3W0D1 207 aa17.58■□□□□ 0.41
NPHP3-201ENST00000337331 ATP1A1P05023 1023 aaKnown RBP17.58■□□□□ 0.41
NPHP3-201ENST00000337331 TCP1P17987 556 aaKnown RBP17.58■□□□□ 0.41
NPHP3-201ENST00000337331 SLMAPQ14BN4 828 aa17.58■□□□□ 0.41
NPHP3-201ENST00000337331 USH1GQ495M9 461 aa17.58■□□□□ 0.41
NPHP3-201ENST00000337331 CTTNBP2NLQ9P2B4 639 aa17.58■□□□□ 0.41
NPHP3-201ENST00000337331 BUB1O43683 1085 aa17.58■□□□□ 0.41
NPHP3-201ENST00000337331 EXOC3O60645 756 aa17.58■□□□□ 0.41
NPHP3-201ENST00000337331 FNBP1Q96RU3 617 aa17.58■□□□□ 0.41
NPHP3-201ENST00000337331 KRT12Q99456 494 aa17.58■□□□□ 0.41
NPHP3-201ENST00000337331 GPHNQ9NQX3 736 aaPredicted RBP17.58■□□□□ 0.41
NPHP3-201ENST00000337331 GTPBP6O43824 516 aaPredicted RBP17.58■□□□□ 0.4
NPHP3-201ENST00000337331 CALUO43852 315 aaPredicted RBP17.58■□□□□ 0.4
NPHP3-201ENST00000337331 PEX26Q7Z412 305 aa17.58■□□□□ 0.4
NPHP3-201ENST00000337331 CSRNP2Q9H175 543 aa17.58■□□□□ 0.4
NPHP3-201ENST00000337331 RAB21Q9UL25 225 aa17.58■□□□□ 0.4
NPHP3-201ENST00000337331 PCDHB13Q9Y5F0 798 aa17.58■□□□□ 0.4
NPHP3-201ENST00000337331 MED23Q9ULK4 1368 aa17.58■□□□□ 0.4
NPHP3-201ENST00000337331 MAP3K15Q6ZN16 1313 aa17.58■□□□□ 0.4
NPHP3-201ENST00000337331 M0R2C6 588 aa17.58■□□□□ 0.4
NPHP3-201ENST00000337331 CCNHP51946 323 aaPredicted RBP17.58■□□□□ 0.4
NPHP3-201ENST00000337331 PTPROQ16827 1216 aa17.58■□□□□ 0.4
NPHP3-201ENST00000337331 ARHGEF2Q92974 986 aaKnown RBP17.58■□□□□ 0.4
NPHP3-201ENST00000337331 AIFM3Q96NN9 605 aa17.58■□□□□ 0.4
NPHP3-201ENST00000337331 ZNF185O15231 689 aa17.57■□□□□ 0.4
NPHP3-201ENST00000337331 CIAO1O76071 339 aa17.57■□□□□ 0.4
NPHP3-201ENST00000337331 GCNT3O95395 438 aa17.57■□□□□ 0.4
NPHP3-201ENST00000337331 CHRNDQ07001 517 aa17.57■□□□□ 0.4
NPHP3-201ENST00000337331 UHMK1Q8TAS1 419 aaKnown RBP17.57■□□□□ 0.4
NPHP3-201ENST00000337331 ARL8AQ96BM9 186 aa17.57■□□□□ 0.4
NPHP3-201ENST00000337331 UTP11Q9Y3A2 253 aaKnown RBP17.57■□□□□ 0.4
NPHP3-201ENST00000337331 CREB3O43889 395 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms