RNA–Protein interactions for RNA: ENST00000336648.8

HLCS-201, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-201ENST00000336648 CTSWP56202 376 aa14.25□□□□□ -0.13
HLCS-201ENST00000336648 ARMCX5Q6P1M9 558 aa14.25□□□□□ -0.13
HLCS-201ENST00000336648 FBXO11Q86XK2 927 aa14.25□□□□□ -0.13
HLCS-201ENST00000336648 BCAS4Q8TDM0 211 aa14.25□□□□□ -0.13
HLCS-201ENST00000336648 EPS15L1Q9UBC2 864 aa14.25□□□□□ -0.13
HLCS-201ENST00000336648 CSADQ9Y600 493 aa14.25□□□□□ -0.13
HLCS-201ENST00000336648 PPP6R2O75170 966 aa14.25□□□□□ -0.13
HLCS-201ENST00000336648 LRMPQ12912 555 aa14.25□□□□□ -0.13
HLCS-201ENST00000336648 DDX25Q9UHL0 483 aaKnown RBP14.25□□□□□ -0.13
HLCS-201ENST00000336648 CDC23Q9UJX2 597 aa14.25□□□□□ -0.13
HLCS-201ENST00000336648 PNMA6EA0A0J9YXQ4 647 aa14.25□□□□□ -0.13
HLCS-201ENST00000336648 A6NJR5 290 aa14.25□□□□□ -0.13
HLCS-201ENST00000336648 NEURL1BA8MQ27 555 aa14.25□□□□□ -0.13
HLCS-201ENST00000336648 SEMA3EO15041 775 aa14.25□□□□□ -0.13
HLCS-201ENST00000336648 C10orf76Q5T2E6 689 aa14.25□□□□□ -0.13
HLCS-201ENST00000336648 SCYL2Q6P3W7 929 aa14.25□□□□□ -0.13
HLCS-201ENST00000336648 RGS12O14924 1447 aa14.25□□□□□ -0.13
HLCS-201ENST00000336648 ATP10BO94823 1461 aa14.25□□□□□ -0.13
HLCS-201ENST00000336648 STX1BP61266 288 aa14.25□□□□□ -0.13
HLCS-201ENST00000336648 CCDC197Q8NCU1 140 aa14.25□□□□□ -0.13
HLCS-201ENST00000336648 RRAGDQ9NQL2 400 aaPredicted RBP14.25□□□□□ -0.13
HLCS-201ENST00000336648 TMEM63CQ9P1W3 806 aa14.25□□□□□ -0.13
HLCS-201ENST00000336648 TAF5LO75529 589 aa14.25□□□□□ -0.13
HLCS-201ENST00000336648 INHBAP08476 426 aa14.25□□□□□ -0.13
HLCS-201ENST00000336648 PTPREP23469 700 aa14.25□□□□□ -0.13
HLCS-201ENST00000336648 POLR2FP61218 127 aaKnown RBP14.25□□□□□ -0.13
HLCS-201ENST00000336648 EXOC3L4Q17RC7 722 aa14.25□□□□□ -0.13
HLCS-201ENST00000336648 ANKRD35Q8N283 1001 aa14.25□□□□□ -0.13
HLCS-201ENST00000336648 SCHIP1Q9P0W5 487 aaPredicted RBP14.25□□□□□ -0.13
HLCS-201ENST00000336648 MID2Q9UJV3 735 aa14.25□□□□□ -0.13
HLCS-201ENST00000336648 CCPG1Q9ULG6 757 aa14.25□□□□□ -0.13
HLCS-201ENST00000336648 ESYT2A0FGR8 921 aa14.24□□□□□ -0.13
HLCS-201ENST00000336648 EIF4A1P60842 406 aaKnown RBP14.24□□□□□ -0.13
HLCS-201ENST00000336648 EFHD1Q9BUP0 239 aa14.24□□□□□ -0.13
HLCS-201ENST00000336648 ZNF148Q9UQR1 794 aa14.24□□□□□ -0.13
HLCS-201ENST00000336648 CLTAP09496 248 aa14.24□□□□□ -0.13
HLCS-201ENST00000336648 RAP1GDS1P52306 607 aa14.24□□□□□ -0.13
HLCS-201ENST00000336648 EPHB4P54760 987 aa14.24□□□□□ -0.13
HLCS-201ENST00000336648 UBE3CQ15386 1083 aa14.24□□□□□ -0.13
HLCS-201ENST00000336648 MMEL1Q495T6 779 aa14.24□□□□□ -0.13
HLCS-201ENST00000336648 PNMA1Q8ND90 353 aa14.24□□□□□ -0.13
HLCS-201ENST00000336648 SCOCQ9UIL1 159 aa14.24□□□□□ -0.13
HLCS-201ENST00000336648 ABCC4O15439 1325 aa14.24□□□□□ -0.13
HLCS-201ENST00000336648 IKBKBO14920 756 aa14.24□□□□□ -0.13
HLCS-201ENST00000336648 PER1O15534 1290 aaPredicted RBP14.24□□□□□ -0.13
HLCS-201ENST00000336648 TTI1O43156 1089 aa14.24□□□□□ -0.13
HLCS-201ENST00000336648 RFX1P22670 979 aa14.24□□□□□ -0.13
HLCS-201ENST00000336648 COPB1P53618 953 aaKnown RBP14.24□□□□□ -0.13
HLCS-201ENST00000336648 SF3A3Q12874 501 aaKnown RBP eCLIP14.24□□□□□ -0.13
HLCS-201ENST00000336648 CCDC124Q96CT7 223 aaKnown RBP14.24□□□□□ -0.13
HLCS-201ENST00000336648 CCDC17Q96LX7 622 aa14.24□□□□□ -0.13
HLCS-201ENST00000336648 CNOT10Q9H9A5 744 aaKnown RBP14.24□□□□□ -0.13
HLCS-201ENST00000336648 TECP42680 631 aa14.24□□□□□ -0.13
HLCS-201ENST00000336648 NT5C1BQ96P26 610 aa14.24□□□□□ -0.13
HLCS-201ENST00000336648 USP28Q96RU2 1077 aa14.24□□□□□ -0.13
HLCS-201ENST00000336648 GPR108Q9NPR9 543 aa14.24□□□□□ -0.13
HLCS-201ENST00000336648 MYO1FO00160 1098 aa14.24□□□□□ -0.13
HLCS-201ENST00000336648 GCFC2P16383 781 aaKnown RBP14.24□□□□□ -0.13
HLCS-201ENST00000336648 EEF1DP29692 281 aaKnown RBP14.24□□□□□ -0.13
HLCS-201ENST00000336648 MTMR6Q9Y217 621 aa14.24□□□□□ -0.13
HLCS-201ENST00000336648 ORC6Q9Y5N6 252 aa14.24□□□□□ -0.13
HLCS-201ENST00000336648 USP17L12C9JPN9 530 aa14.23□□□□□ -0.13
HLCS-201ENST00000336648 USP17L21D6R901 530 aa14.23□□□□□ -0.13
HLCS-201ENST00000336648 RDH13Q8NBN7 331 aa14.23□□□□□ -0.13
HLCS-201ENST00000336648 FBXO41Q8TF61 875 aa14.23□□□□□ -0.13
HLCS-201ENST00000336648 FOXP1Q9H334 677 aaPredicted RBP14.23□□□□□ -0.13
HLCS-201ENST00000336648 ANAPC5Q9UJX4 755 aa14.23□□□□□ -0.13
HLCS-201ENST00000336648 ARHGEF37A1IGU5 675 aa14.23□□□□□ -0.13
HLCS-201ENST00000336648 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.23□□□□□ -0.13
HLCS-201ENST00000336648 ZNF233A6NK53 670 aa14.23□□□□□ -0.13
HLCS-201ENST00000336648 KRT10P13645 584 aa14.23□□□□□ -0.13
HLCS-201ENST00000336648 SMCR8Q8TEV9 937 aaPredicted RBP14.23□□□□□ -0.13
HLCS-201ENST00000336648 CEP19Q96LK0 163 aa14.23□□□□□ -0.13
HLCS-201ENST00000336648 TNKSO95271 1327 aa14.23□□□□□ -0.13
HLCS-201ENST00000336648 KLRF2D3W0D1 207 aa14.23□□□□□ -0.13
HLCS-201ENST00000336648 MYL7Q01449 175 aa14.23□□□□□ -0.13
HLCS-201ENST00000336648 FAM47AQ5JRC9 791 aa14.23□□□□□ -0.13
HLCS-201ENST00000336648 GPATCH4Q5T3I0 446 aaKnown RBP14.23□□□□□ -0.13
HLCS-201ENST00000336648 PLA2G4DQ86XP0 818 aa14.23□□□□□ -0.13
HLCS-201ENST00000336648 SRRM1Q8IYB3 904 aaKnown RBP14.23□□□□□ -0.13
HLCS-201ENST00000336648 STAMQ92783 540 aa14.23□□□□□ -0.13
HLCS-201ENST00000336648 INTS9Q9NV88 658 aaKnown RBP14.23□□□□□ -0.13
HLCS-201ENST00000336648 SEPT2Q15019 361 aa14.23□□□□□ -0.13
HLCS-201ENST00000336648 CCDC92Q53HC0 331 aaPredicted RBP14.23□□□□□ -0.13
HLCS-201ENST00000336648 ARHGEF18Q6ZSZ5 1173 aa14.23□□□□□ -0.13
HLCS-201ENST00000336648 HDAC11Q96DB2 347 aa14.23□□□□□ -0.13
HLCS-201ENST00000336648 DPH5Q9H2P9 285 aa14.23□□□□□ -0.13
HLCS-201ENST00000336648 TESPA1A2RU30 521 aaPredicted RBP14.22□□□□□ -0.13
HLCS-201ENST00000336648 F8W8V4 182 aa14.22□□□□□ -0.13
HLCS-201ENST00000336648 MFSD14BQ5SR56 506 aa14.22□□□□□ -0.13
HLCS-201ENST00000336648 SPOUT1Q5T280 376 aaKnown RBP14.22□□□□□ -0.13
HLCS-201ENST00000336648 TTC1Q99614 292 aa14.22□□□□□ -0.13
HLCS-201ENST00000336648 TLR3O15455 904 aaKnown RBP14.22□□□□□ -0.13
HLCS-201ENST00000336648 MAN1A2O60476 641 aa14.22□□□□□ -0.13
HLCS-201ENST00000336648 RPSAP08865 295 aaKnown RBP14.22□□□□□ -0.13
HLCS-201ENST00000336648 RSBN1LQ6PCB5 846 aaPredicted RBP14.22□□□□□ -0.13
HLCS-201ENST00000336648 PPM1KQ8N3J5 372 aa14.22□□□□□ -0.13
HLCS-201ENST00000336648 TDRD7Q8NHU6 1098 aaKnown RBP14.22□□□□□ -0.13
HLCS-201ENST00000336648 USP6NLQ92738 828 aa14.22□□□□□ -0.13
HLCS-201ENST00000336648 PDE6AP16499 860 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms