RNA–Protein interactions for RNA: ENST00000330943.8

SNX20-202, Transcript of sorting nexin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX20, Length 2,904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-202ENST00000330943 P2RX5Q93086 422 aa16.06■□□□□ 0.16
SNX20-202ENST00000330943 DHTKD1Q96HY7 919 aaPredicted RBP16.06■□□□□ 0.16
SNX20-202ENST00000330943 ALS2CR12Q96Q35 445 aa16.06■□□□□ 0.16
SNX20-202ENST00000330943 ARHGAP20Q9P2F6 1191 aa16.06■□□□□ 0.16
SNX20-202ENST00000330943 LRP5O75197 1615 aa16.06■□□□□ 0.16
SNX20-202ENST00000330943 KIAA0754O94854 1291 aa16.05■□□□□ 0.16
SNX20-202ENST00000330943 KIF11P52732 1056 aa16.05■□□□□ 0.16
SNX20-202ENST00000330943 MIIPQ5JXC2 388 aa16.05■□□□□ 0.16
SNX20-202ENST00000330943 BLIDQ8IZY5 108 aa16.05■□□□□ 0.16
SNX20-202ENST00000330943 TMEM60Q9H2L4 133 aa16.05■□□□□ 0.16
SNX20-202ENST00000330943 H0YHG0 523 aa16.05■□□□□ 0.16
SNX20-202ENST00000330943 CCNE1P24864 410 aa16.05■□□□□ 0.16
SNX20-202ENST00000330943 USP8P40818 1118 aa16.05■□□□□ 0.16
SNX20-202ENST00000330943 PAFAH1B1P43034 410 aa16.05■□□□□ 0.16
SNX20-202ENST00000330943 CDK17Q00537 523 aa16.05■□□□□ 0.16
SNX20-202ENST00000330943 EVX2Q03828 476 aa16.05■□□□□ 0.16
SNX20-202ENST00000330943 NNTQ13423 1086 aa16.05■□□□□ 0.16
SNX20-202ENST00000330943 FAM114A1Q8IWE2 563 aa16.05■□□□□ 0.16
SNX20-202ENST00000330943 ANKRD13CQ8N6S4 541 aa16.05■□□□□ 0.16
SNX20-202ENST00000330943 FAM207AQ9NSI2 230 aaPredicted RBP16.05■□□□□ 0.16
SNX20-202ENST00000330943 AKR1B10O60218 316 aa16.05■□□□□ 0.16
SNX20-202ENST00000330943 EIF4A3P38919 411 aaKnown RBP16.05■□□□□ 0.16
SNX20-202ENST00000330943 PDE4DQ08499 809 aa16.05■□□□□ 0.16
SNX20-202ENST00000330943 FAM47AQ5JRC9 791 aa16.05■□□□□ 0.16
SNX20-202ENST00000330943 FAM182BQ5T319 152 aa16.05■□□□□ 0.16
SNX20-202ENST00000330943 B4GALNT4Q76KP1 1039 aa16.05■□□□□ 0.16
SNX20-202ENST00000330943 CNPY4Q8N129 248 aa16.05■□□□□ 0.16
SNX20-202ENST00000330943 OTUD6BQ8N6M0 293 aa16.05■□□□□ 0.16
SNX20-202ENST00000330943 LRRC15Q8TF66 581 aa16.05■□□□□ 0.16
SNX20-202ENST00000330943 RBM12Q9NTZ6 932 aaKnown RBP16.05■□□□□ 0.16
SNX20-202ENST00000330943 KBTBD4Q9NVX7 518 aa16.05■□□□□ 0.16
SNX20-202ENST00000330943 A0A1W2PQJ5 194 aa16.04■□□□□ 0.16
SNX20-202ENST00000330943 BICDL2A1A5D9 508 aa16.04■□□□□ 0.16
SNX20-202ENST00000330943 PRLRP16471 622 aa16.04■□□□□ 0.16
SNX20-202ENST00000330943 CAVIN3Q969G5 261 aa16.04■□□□□ 0.16
SNX20-202ENST00000330943 CCDC43Q96MW1 224 aaKnown RBP16.04■□□□□ 0.16
SNX20-202ENST00000330943 ERGIC2Q96RQ1 377 aa16.04■□□□□ 0.16
SNX20-202ENST00000330943 RIOK1Q9BRS2 568 aaKnown RBP16.04■□□□□ 0.16
SNX20-202ENST00000330943 MYO1FO00160 1098 aa16.04■□□□□ 0.16
SNX20-202ENST00000330943 EPHB6O15197 1021 aa16.04■□□□□ 0.16
SNX20-202ENST00000330943 CALML3P27482 149 aa16.04■□□□□ 0.16
SNX20-202ENST00000330943 PLAGL2Q9UPG8 496 aa16.04■□□□□ 0.16
SNX20-202ENST00000330943 ANKRD36CQ5JPF3 1778 aa16.03■□□□□ 0.16
SNX20-202ENST00000330943 CCDC194A0A1B0GVG4 234 aa16.03■□□□□ 0.16
SNX20-202ENST00000330943 STK4Q13043 487 aa16.03■□□□□ 0.16
SNX20-202ENST00000330943 FIGNQ5HY92 759 aa16.03■□□□□ 0.16
SNX20-202ENST00000330943 MS4A14Q96JA4 679 aa16.03■□□□□ 0.16
SNX20-202ENST00000330943 TOGARAM1Q9Y4F4 1720 aa16.03■□□□□ 0.16
SNX20-202ENST00000330943 ESYT3A0FGR9 886 aa16.03■□□□□ 0.16
SNX20-202ENST00000330943 USP17L12C9JPN9 530 aa16.03■□□□□ 0.16
SNX20-202ENST00000330943 USP17L21D6R901 530 aa16.03■□□□□ 0.16
SNX20-202ENST00000330943 MYL1P05976 194 aa16.03■□□□□ 0.16
SNX20-202ENST00000330943 FCER1AP12319 257 aa16.03■□□□□ 0.16
SNX20-202ENST00000330943 ASIC1P78348 528 aa16.03■□□□□ 0.16
SNX20-202ENST00000330943 CFAP58Q5T655 872 aa16.03■□□□□ 0.16
SNX20-202ENST00000330943 PAXIP1Q6ZW49 1069 aaPredicted RBP16.03■□□□□ 0.16
SNX20-202ENST00000330943 PRPF38AQ8NAV1 312 aaKnown RBP16.03■□□□□ 0.16
SNX20-202ENST00000330943 SALL4Q9UJQ4 1053 aa16.03■□□□□ 0.16
SNX20-202ENST00000330943 NFU1Q9UMS0 254 aa16.03■□□□□ 0.16
SNX20-202ENST00000330943 A6NNZ2 444 aa16.02■□□□□ 0.16
SNX20-202ENST00000330943 GUCY1A3Q02108 690 aa16.02■□□□□ 0.16
SNX20-202ENST00000330943 TUBB8Q3ZCM7 444 aa16.02■□□□□ 0.16
SNX20-202ENST00000330943 DZIP3Q86Y13 1208 aaKnown RBP16.02■□□□□ 0.16
SNX20-202ENST00000330943 ZSCAN29Q8IWY8 852 aaPredicted RBP16.02■□□□□ 0.16
SNX20-202ENST00000330943 IFT81Q8WYA0 676 aa16.02■□□□□ 0.16
SNX20-202ENST00000330943 CCDC47Q96A33 483 aaKnown RBP16.02■□□□□ 0.16
SNX20-202ENST00000330943 RNPC3Q96LT9 517 aaKnown RBP16.02■□□□□ 0.16
SNX20-202ENST00000330943 ZSCAN5CA6NGD5 496 aaPredicted RBP16.02■□□□□ 0.15
SNX20-202ENST00000330943 MEFVO15553 781 aaPredicted RBP16.02■□□□□ 0.15
SNX20-202ENST00000330943 BUB1O43683 1085 aa16.02■□□□□ 0.15
SNX20-202ENST00000330943 FAM153BP0C7A2 387 aa16.02■□□□□ 0.15
SNX20-202ENST00000330943 PLCG1P19174 1290 aa16.02■□□□□ 0.15
SNX20-202ENST00000330943 CARSP49589 748 aaKnown RBP16.02■□□□□ 0.15
SNX20-202ENST00000330943 DNA2P51530 1060 aa16.02■□□□□ 0.15
SNX20-202ENST00000330943 APBA1Q02410 837 aa16.02■□□□□ 0.15
SNX20-202ENST00000330943 INF2Q27J81 1249 aa16.02■□□□□ 0.15
SNX20-202ENST00000330943 FAM153CQ494X1 144 aa16.02■□□□□ 0.15
SNX20-202ENST00000330943 MMRN2Q9H8L6 949 aa16.02■□□□□ 0.15
SNX20-202ENST00000330943 FAM153AQ9UHL3 310 aa16.02■□□□□ 0.15
SNX20-202ENST00000330943 GLI1P08151 1106 aa16.01■□□□□ 0.15
SNX20-202ENST00000330943 LSP1P33241 339 aa16.01■□□□□ 0.15
SNX20-202ENST00000330943 MAGEA1P43355 309 aa16.01■□□□□ 0.15
SNX20-202ENST00000330943 NAP1L1P55209 391 aaKnown RBP16.01■□□□□ 0.15
SNX20-202ENST00000330943 HPS3Q969F9 1004 aa16.01■□□□□ 0.15
SNX20-202ENST00000330943 TLR10Q9BXR5 811 aa16.01■□□□□ 0.15
SNX20-202ENST00000330943 PCDHA4Q9UN74 947 aa16.01■□□□□ 0.15
SNX20-202ENST00000330943 CICQ96RK0 1608 aaPredicted RBP16.01■□□□□ 0.15
SNX20-202ENST00000330943 ZNF233A6NK53 670 aa16.01■□□□□ 0.15
SNX20-202ENST00000330943 TNFRSF8P28908 595 aa16.01■□□□□ 0.15
SNX20-202ENST00000330943 SF3B2Q13435 895 aaKnown RBP16.01■□□□□ 0.15
SNX20-202ENST00000330943 RRAGAQ7L523 313 aa16.01■□□□□ 0.15
SNX20-202ENST00000330943 IFT20Q8IY31 132 aa16.01■□□□□ 0.15
SNX20-202ENST00000330943 CCDC24Q8N4L8 307 aa16.01■□□□□ 0.15
SNX20-202ENST00000330943 CABS1Q96KC9 395 aa16.01■□□□□ 0.15
SNX20-202ENST00000330943 BRIP1Q9BX63 1249 aa16.01■□□□□ 0.15
SNX20-202ENST00000330943 TRIM9Q9C026 710 aa16.01■□□□□ 0.15
SNX20-202ENST00000330943 CCSER1Q9C0I3 900 aa16.01■□□□□ 0.15
SNX20-202ENST00000330943 SHANK3Q9BYB0 1731 aa16.01■□□□□ 0.15
SNX20-202ENST00000330943 NUP98P52948 1817 aa16.01■□□□□ 0.15
SNX20-202ENST00000330943 XIRP1Q702N8 1843 aaKnown RBP16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms