RNA–Protein interactions for RNA: ENST00000330687.8

CMTM4-201, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene CMTM4, Length 3,414 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-201ENST00000330687 ZBED6P86452 979 aa22.76■■□□□ 1.23
CMTM4-201ENST00000330687 SNX1Q13596 522 aa22.76■■□□□ 1.23
CMTM4-201ENST00000330687 WLSQ5T9L3 541 aa22.76■■□□□ 1.23
CMTM4-201ENST00000330687 ARMC3Q5W041 872 aa22.76■■□□□ 1.23
CMTM4-201ENST00000330687 AP1M1Q9BXS5 423 aa22.76■■□□□ 1.23
CMTM4-201ENST00000330687 TSGA10Q9BZW7 698 aa22.76■■□□□ 1.23
CMTM4-201ENST00000330687 IQSEC3Q9UPP2 1182 aaPredicted RBP22.76■■□□□ 1.23
CMTM4-201ENST00000330687 CD2APQ9Y5K6 639 aa22.76■■□□□ 1.23
CMTM4-201ENST00000330687 DIAPH2O60879 1101 aa22.76■■□□□ 1.23
CMTM4-201ENST00000330687 CEBPAP49715 358 aaPredicted RBP22.76■■□□□ 1.23
CMTM4-201ENST00000330687 RMND1Q9NWS8 449 aa22.76■■□□□ 1.23
CMTM4-201ENST00000330687 SYNE4Q8N205 404 aa22.75■■□□□ 1.23
CMTM4-201ENST00000330687 RASGRP4Q8TDF6 673 aa22.75■■□□□ 1.23
CMTM4-201ENST00000330687 SH2D4AQ9H788 454 aa22.75■■□□□ 1.23
CMTM4-201ENST00000330687 HMGB1P1B2RPK0 211 aaPredicted RBP22.75■■□□□ 1.23
CMTM4-201ENST00000330687 SMIM22K7EJ46 135 aa22.75■■□□□ 1.23
CMTM4-201ENST00000330687 PLEKHA8P1O95397 391 aa22.75■■□□□ 1.23
CMTM4-201ENST00000330687 ITGB3BPQ13352 177 aaPredicted RBP22.75■■□□□ 1.23
CMTM4-201ENST00000330687 LMBR1Q8WVP7 490 aa22.75■■□□□ 1.23
CMTM4-201ENST00000330687 MTMR8Q96EF0 704 aa22.75■■□□□ 1.23
CMTM4-201ENST00000330687 PXDNQ92626 1479 aa22.75■■□□□ 1.23
CMTM4-201ENST00000330687 CTNND1O60716 968 aaKnown RBP22.75■■□□□ 1.23
CMTM4-201ENST00000330687 SLC1A4P43007 532 aa22.75■■□□□ 1.23
CMTM4-201ENST00000330687 DNAAF5Q86Y56 855 aa22.75■■□□□ 1.23
CMTM4-201ENST00000330687 ELOA2Q8IYF1 753 aaPredicted RBP22.75■■□□□ 1.23
CMTM4-201ENST00000330687 VIMP08670 466 aaKnown RBP22.74■■□□□ 1.23
CMTM4-201ENST00000330687 ZKSCAN8Q15776 578 aaPredicted RBP22.74■■□□□ 1.23
CMTM4-201ENST00000330687 SH3RF1Q7Z6J0 888 aa22.74■■□□□ 1.23
CMTM4-201ENST00000330687 IFNL3Q8IZI9 196 aa22.74■■□□□ 1.23
CMTM4-201ENST00000330687 NOX5Q96PH1 765 aa22.74■■□□□ 1.23
CMTM4-201ENST00000330687 DPH5Q9H2P9 285 aa22.74■■□□□ 1.23
CMTM4-201ENST00000330687 TMCO5BA8MYB1 307 aa22.74■■□□□ 1.23
CMTM4-201ENST00000330687 ANP32DO95626 131 aa22.74■■□□□ 1.23
CMTM4-201ENST00000330687 PDE6AP16499 860 aa22.74■■□□□ 1.23
CMTM4-201ENST00000330687 RAPGEF5Q92565 580 aa22.74■■□□□ 1.23
CMTM4-201ENST00000330687 FERMT2Q96AC1 680 aa22.74■■□□□ 1.23
CMTM4-201ENST00000330687 TULP1O00294 542 aaPredicted RBP22.73■■□□□ 1.23
CMTM4-201ENST00000330687 ADD2P35612 726 aa22.73■■□□□ 1.23
CMTM4-201ENST00000330687 UBA7P41226 1012 aa22.73■■□□□ 1.23
CMTM4-201ENST00000330687 THEMIS2Q5TEJ8 643 aa22.73■■□□□ 1.23
CMTM4-201ENST00000330687 YTHDF3Q7Z739 585 aaKnown RBP22.73■■□□□ 1.23
CMTM4-201ENST00000330687 ARHGAP20Q9P2F6 1191 aa22.73■■□□□ 1.23
CMTM4-201ENST00000330687 EPHB6O15197 1021 aa22.73■■□□□ 1.23
CMTM4-201ENST00000330687 RAD51CO43502 376 aa22.73■■□□□ 1.23
CMTM4-201ENST00000330687 ATP6V1G2O95670 118 aa22.73■■□□□ 1.23
CMTM4-201ENST00000330687 MRPL12P52815 198 aaKnown RBP22.73■■□□□ 1.23
CMTM4-201ENST00000330687 IRX1P78414 480 aaPredicted RBP22.73■■□□□ 1.23
CMTM4-201ENST00000330687 CAPRIN2Q6IMN6 1127 aaKnown RBP22.73■■□□□ 1.23
CMTM4-201ENST00000330687 SPDYE1Q8NFV5 336 aaPredicted RBP22.73■■□□□ 1.23
CMTM4-201ENST00000330687 TBC1D22AQ8WUA7 517 aa22.73■■□□□ 1.23
CMTM4-201ENST00000330687 AKNAD1Q5T1N1 836 aa22.73■■□□□ 1.23
CMTM4-201ENST00000330687 CCDC170Q8IYT3 715 aa22.73■■□□□ 1.23
CMTM4-201ENST00000330687 CAVIN3Q969G5 261 aa22.73■■□□□ 1.23
CMTM4-201ENST00000330687 SAAL1Q96ER3 474 aa22.73■■□□□ 1.23
CMTM4-201ENST00000330687 TLR10Q9BXR5 811 aa22.73■■□□□ 1.23
CMTM4-201ENST00000330687 PALMO75781 387 aa22.72■■□□□ 1.23
CMTM4-201ENST00000330687 IFIT5Q13325 482 aaKnown RBP22.72■■□□□ 1.23
CMTM4-201ENST00000330687 GNPTABQ3T906 1256 aa22.72■■□□□ 1.23
CMTM4-201ENST00000330687 PLBD2Q8NHP8 589 aa22.72■■□□□ 1.23
CMTM4-201ENST00000330687 TAF4BQ92750 862 aa22.72■■□□□ 1.23
CMTM4-201ENST00000330687 ATP6V0A4Q9HBG4 840 aa22.72■■□□□ 1.23
CMTM4-201ENST00000330687 KCNK3O14649 394 aa22.72■■□□□ 1.23
CMTM4-201ENST00000330687 CEP104O60308 925 aa22.72■■□□□ 1.23
CMTM4-201ENST00000330687 ASIC1P78348 528 aa22.72■■□□□ 1.23
CMTM4-201ENST00000330687 PDE4DQ08499 809 aa22.72■■□□□ 1.23
CMTM4-201ENST00000330687 KSR1Q8IVT5 923 aa22.72■■□□□ 1.23
CMTM4-201ENST00000330687 CCDC155Q8N6L0 562 aa22.72■■□□□ 1.23
CMTM4-201ENST00000330687 DIP2CQ9Y2E4 1556 aa22.72■■□□□ 1.23
CMTM4-201ENST00000330687 ADAT2Q7Z6V5 191 aaKnown RBP22.72■■□□□ 1.23
CMTM4-201ENST00000330687 KIF2BQ8N4N8 673 aa22.72■■□□□ 1.23
CMTM4-201ENST00000330687 PRCCQ92733 491 aaPredicted RBP22.72■■□□□ 1.23
CMTM4-201ENST00000330687 CUL5Q93034 780 aa22.72■■□□□ 1.23
CMTM4-201ENST00000330687 SLC52A2Q9HAB3 445 aa22.72■■□□□ 1.23
CMTM4-201ENST00000330687 CNOT8Q9UFF9 292 aaKnown RBP22.72■■□□□ 1.23
CMTM4-201ENST00000330687 PHF8Q9UPP1 1060 aa22.72■■□□□ 1.23
CMTM4-201ENST00000330687 HSD17B3P37058 310 aa22.71■■□□□ 1.23
CMTM4-201ENST00000330687 ELF3P78545 371 aaPredicted RBP22.71■■□□□ 1.23
CMTM4-201ENST00000330687 TMED8Q6PL24 325 aaPredicted RBP22.71■■□□□ 1.23
CMTM4-201ENST00000330687 SGMS1Q86VZ5 419 aa22.71■■□□□ 1.23
CMTM4-201ENST00000330687 PIK3R5Q8WYR1 880 aa22.71■■□□□ 1.23
CMTM4-201ENST00000330687 SPAG5Q96R06 1193 aa22.71■■□□□ 1.23
CMTM4-201ENST00000330687 ELAC2Q9BQ52 826 aaKnown RBP22.71■■□□□ 1.23
CMTM4-201ENST00000330687 LRRC53A6NM62 1247 aa22.71■■□□□ 1.23
CMTM4-201ENST00000330687 PHKA1P46020 1223 aa22.71■■□□□ 1.23
CMTM4-201ENST00000330687 KANSL2Q9H9L4 492 aa22.71■■□□□ 1.23
CMTM4-201ENST00000330687 CABP4P57796 275 aa22.7■■□□□ 1.23
CMTM4-201ENST00000330687 ZNF483Q8TF39 744 aaPredicted RBP22.7■■□□□ 1.23
CMTM4-201ENST00000330687 IRAK4Q9NWZ3 460 aa22.7■■□□□ 1.22
CMTM4-201ENST00000330687 FBXL5Q9UKA1 691 aa22.7■■□□□ 1.22
CMTM4-201ENST00000330687 RIMBP3CA6NJZ7 1639 aa22.7■■□□□ 1.22
CMTM4-201ENST00000330687 RIMBP3BA6NNM3 1639 aa22.7■■□□□ 1.22
CMTM4-201ENST00000330687 RIMBP3Q9UFD9 1639 aa22.7■■□□□ 1.22
CMTM4-201ENST00000330687 PLCB4Q15147 1175 aa22.7■■□□□ 1.22
CMTM4-201ENST00000330687 TACC3Q9Y6A5 838 aa22.7■■□□□ 1.22
CMTM4-201ENST00000330687 SRGNP10124 158 aa22.69■■□□□ 1.22
CMTM4-201ENST00000330687 EEF1GP26641 437 aaKnown RBP22.69■■□□□ 1.22
CMTM4-201ENST00000330687 LIFRP42702 1097 aa22.69■■□□□ 1.22
CMTM4-201ENST00000330687 ADSSL1Q8N142 457 aa22.69■■□□□ 1.22
CMTM4-201ENST00000330687 EPB41L4AQ9HCS5 686 aaPredicted RBP22.69■■□□□ 1.22
CMTM4-201ENST00000330687 MGARPQ8TDB4 240 aa22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms