RNA–Protein interactions for RNA: ENST00000329151.5

TMEM54-201, Transcript of transmembrane protein 54, humanhuman

TSL 1 (best) BASIC

Gene TMEM54, Length 871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-201ENST00000329151 TIFAQ96CG3 184 aa27.37■■□□□ 1.97
TMEM54-201ENST00000329151 YTHDC1Q96MU7 727 aaKnown RBP27.37■■□□□ 1.97
TMEM54-201ENST00000329151 DDX49Q9Y6V7 483 aaKnown RBP27.37■■□□□ 1.97
TMEM54-201ENST00000329151 RAD50Q92878 1312 aa27.37■■□□□ 1.97
TMEM54-201ENST00000329151 NFIBO00712 420 aa27.36■■□□□ 1.97
TMEM54-201ENST00000329151 CYP2C18P33260 490 aa27.36■■□□□ 1.97
TMEM54-201ENST00000329151 CPT1AP50416 773 aa27.36■■□□□ 1.97
TMEM54-201ENST00000329151 CCDC178Q5BJE1 867 aa27.36■■□□□ 1.97
TMEM54-201ENST00000329151 TMEM240Q5SV17 173 aa27.36■■□□□ 1.97
TMEM54-201ENST00000329151 IQCA1Q86XH1 822 aa27.36■■□□□ 1.97
TMEM54-201ENST00000329151 WDR11Q9BZH6 1224 aa27.36■■□□□ 1.97
TMEM54-201ENST00000329151 POLR3EQ9NVU0 708 aa27.36■■□□□ 1.97
TMEM54-201ENST00000329151 HIP1O00291 1037 aa27.35■■□□□ 1.97
TMEM54-201ENST00000329151 ACRP10323 421 aa27.35■■□□□ 1.97
TMEM54-201ENST00000329151 SDSP20132 328 aa27.35■■□□□ 1.97
TMEM54-201ENST00000329151 NT5C2P49902 561 aa27.35■■□□□ 1.97
TMEM54-201ENST00000329151 ZNF543Q08ER8 600 aa27.35■■□□□ 1.97
TMEM54-201ENST00000329151 DUSP28Q4G0W2 176 aa27.35■■□□□ 1.97
TMEM54-201ENST00000329151 GPATCH4Q5T3I0 446 aaKnown RBP27.35■■□□□ 1.97
TMEM54-201ENST00000329151 ZNF365Q70YC5 407 aa27.35■■□□□ 1.97
TMEM54-201ENST00000329151 PURBQ96QR8 312 aaKnown RBP27.35■■□□□ 1.97
TMEM54-201ENST00000329151 IL23AQ9NPF7 189 aa27.35■■□□□ 1.97
TMEM54-201ENST00000329151 CD4P01730 458 aa27.34■■□□□ 1.97
TMEM54-201ENST00000329151 CHD1LQ86WJ1 897 aa27.34■■□□□ 1.97
TMEM54-201ENST00000329151 OR6J1Q8NGC5 347 aa27.34■■□□□ 1.97
TMEM54-201ENST00000329151 MORC4Q8TE76 937 aa27.34■■□□□ 1.97
TMEM54-201ENST00000329151 ZNF576Q9H609 170 aa27.34■■□□□ 1.97
TMEM54-201ENST00000329151 MSRAQ9UJ68 235 aa27.34■■□□□ 1.97
TMEM54-201ENST00000329151 MYH6P13533 1939 aa27.33■■□□□ 1.97
TMEM54-201ENST00000329151 MYL3P08590 195 aa27.33■■□□□ 1.97
TMEM54-201ENST00000329151 PPP2R5BQ15173 497 aa27.33■■□□□ 1.97
TMEM54-201ENST00000329151 SLC30A10Q6XR72 485 aa27.33■■□□□ 1.97
TMEM54-201ENST00000329151 SLC43A3Q8NBI5 491 aa27.33■■□□□ 1.97
TMEM54-201ENST00000329151 GAS2L1Q99501 681 aaPredicted RBP27.33■■□□□ 1.97
TMEM54-201ENST00000329151 ZKSCAN3Q9BRR0 538 aa27.33■■□□□ 1.97
TMEM54-201ENST00000329151 KAT14Q9H8E8 782 aa27.33■■□□□ 1.97
TMEM54-201ENST00000329151 WDR19Q8NEZ3 1342 aa27.33■■□□□ 1.97
TMEM54-201ENST00000329151 FGBP02675 491 aa27.32■■□□□ 1.96
TMEM54-201ENST00000329151 PSMC6P62333 389 aa27.32■■□□□ 1.96
TMEM54-201ENST00000329151 USH1GQ495M9 461 aa27.32■■□□□ 1.96
TMEM54-201ENST00000329151 CWC27Q6UX04 472 aaKnown RBP27.32■■□□□ 1.96
TMEM54-201ENST00000329151 TBC1D10CQ8IV04 446 aa27.32■■□□□ 1.96
TMEM54-201ENST00000329151 SMC5Q8IY18 1101 aa27.32■■□□□ 1.96
TMEM54-201ENST00000329151 RPUSD2Q8IZ73 545 aaKnown RBP27.32■■□□□ 1.96
TMEM54-201ENST00000329151 COL25A1Q9BXS0 654 aaPredicted RBP27.32■■□□□ 1.96
TMEM54-201ENST00000329151 LAMA4Q16363 1823 aa27.32■■□□□ 1.96
TMEM54-201ENST00000329151 DHX16O60231 1041 aaKnown RBP27.31■■□□□ 1.96
TMEM54-201ENST00000329151 SUPT20HL2P0C7V6 817 aa27.31■■□□□ 1.96
TMEM54-201ENST00000329151 PTGS1P23219 599 aa27.31■■□□□ 1.96
TMEM54-201ENST00000329151 CCL23P55773 120 aa27.31■■□□□ 1.96
TMEM54-201ENST00000329151 RAB30Q15771 203 aa27.31■■□□□ 1.96
TMEM54-201ENST00000329151 DGKHQ86XP1 1220 aa27.31■■□□□ 1.96
TMEM54-201ENST00000329151 TRPV6Q9H1D0 765 aa27.31■■□□□ 1.96
TMEM54-201ENST00000329151 NKRFO15226 690 aaKnown RBP eCLIP27.3■■□□□ 1.96
TMEM54-201ENST00000329151 RPS6P62753 249 aaKnown RBP27.3■■□□□ 1.96
TMEM54-201ENST00000329151 GRIN2CQ14957 1233 aa27.3■■□□□ 1.96
TMEM54-201ENST00000329151 FAM47CQ5HY64 1035 aa27.3■■□□□ 1.96
TMEM54-201ENST00000329151 C16orf59Q7L2K0 433 aa27.3■■□□□ 1.96
TMEM54-201ENST00000329151 DNERQ8NFT8 737 aa27.3■■□□□ 1.96
TMEM54-201ENST00000329151 SCFD2Q8WU76 684 aa27.3■■□□□ 1.96
TMEM54-201ENST00000329151 B4GALT4O60513 344 aa27.29■■□□□ 1.96
TMEM54-201ENST00000329151 KDM4AO75164 1064 aa27.29■■□□□ 1.96
TMEM54-201ENST00000329151 GOLGA8HP0CJ92 632 aa27.29■■□□□ 1.96
TMEM54-201ENST00000329151 IMMTQ16891 758 aaKnown RBP27.29■■□□□ 1.96
TMEM54-201ENST00000329151 PNMA1Q8ND90 353 aa27.29■■□□□ 1.96
TMEM54-201ENST00000329151 CLEC4DQ8WXI8 215 aa27.29■■□□□ 1.96
TMEM54-201ENST00000329151 MTG1Q9BT17 334 aaPredicted RBP27.29■■□□□ 1.96
TMEM54-201ENST00000329151 CTNNA3Q9UI47 895 aa27.29■■□□□ 1.96
TMEM54-201ENST00000329151 NEDD4P46934 1319 aa27.29■■□□□ 1.96
TMEM54-201ENST00000329151 GRXCR1A8MXD5 290 aa27.28■■□□□ 1.96
TMEM54-201ENST00000329151 SNHG28P0DPA3 235 aa27.28■■□□□ 1.96
TMEM54-201ENST00000329151 TMEM63BQ5T3F8 832 aa27.28■■□□□ 1.96
TMEM54-201ENST00000329151 OTOP2Q7RTS6 562 aa27.28■■□□□ 1.96
TMEM54-201ENST00000329151 PLEKHM2Q8IWE5 1019 aa27.28■■□□□ 1.96
TMEM54-201ENST00000329151 HERVK_113Q902F9 699 aa27.28■■□□□ 1.96
TMEM54-201ENST00000329151 NOC4LQ9BVI4 516 aaKnown RBP27.28■■□□□ 1.96
TMEM54-201ENST00000329151 PBX4Q9BYU1 374 aa27.28■■□□□ 1.96
TMEM54-201ENST00000329151 ALDH8A1Q9H2A2 487 aaPredicted RBP27.28■■□□□ 1.96
TMEM54-201ENST00000329151 CDH23Q9H251 3354 aa27.28■■□□□ 1.96
TMEM54-201ENST00000329151 KPNA6O60684 536 aa27.27■■□□□ 1.96
TMEM54-201ENST00000329151 NUCB1Q02818 461 aa27.27■■□□□ 1.96
TMEM54-201ENST00000329151 UBA5Q9GZZ9 404 aa27.27■■□□□ 1.96
TMEM54-201ENST00000329151 OSBPL3Q9H4L5 887 aa27.27■■□□□ 1.96
TMEM54-201ENST00000329151 GRIN2DO15399 1336 aa27.26■■□□□ 1.95
TMEM54-201ENST00000329151 ABCB11O95342 1321 aa27.26■■□□□ 1.95
TMEM54-201ENST00000329151 RBM47A0AV96 593 aaKnown RBP27.26■■□□□ 1.95
TMEM54-201ENST00000329151 ZBBXA8MT70 800 aa27.26■■□□□ 1.95
TMEM54-201ENST00000329151 PURAQ00577 322 aaKnown RBP27.26■■□□□ 1.95
TMEM54-201ENST00000329151 TTLL4Q14679 1199 aa27.26■■□□□ 1.95
TMEM54-201ENST00000329151 CDC37Q16543 378 aaPredicted RBP27.26■■□□□ 1.95
TMEM54-201ENST00000329151 RASIP1Q5U651 963 aa27.26■■□□□ 1.95
TMEM54-201ENST00000329151 UBAC1Q9BSL1 405 aa27.26■■□□□ 1.95
TMEM54-201ENST00000329151 KRT23Q9C075 422 aa27.26■■□□□ 1.95
TMEM54-201ENST00000329151 NOD1Q9Y239 953 aa27.26■■□□□ 1.95
TMEM54-201ENST00000329151 TNKSO95271 1327 aa27.25■■□□□ 1.95
TMEM54-201ENST00000329151 UMODL1Q5DID0 1318 aa27.25■■□□□ 1.95
TMEM54-201ENST00000329151 TXNP10599 105 aaKnown RBP27.25■■□□□ 1.95
TMEM54-201ENST00000329151 PBX2P40425 430 aa27.25■■□□□ 1.95
TMEM54-201ENST00000329151 CHMP4BP1P59074 171 aa27.25■■□□□ 1.95
TMEM54-201ENST00000329151 ASPRV1Q53RT3 343 aa27.25■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms