RNA–Protein interactions for RNA: ENST00000328514.11

GINS3-202, Transcript of GINS complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GINS3, Length 1,932 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-202ENST00000328514 RNF10Q8N5U6 811 aaKnown RBP12.52□□□□□ -0.4
GINS3-202ENST00000328514 IFIH1Q9BYX4 1025 aaKnown RBP12.52□□□□□ -0.4
GINS3-202ENST00000328514 MAPK8IP1Q9UQF2 711 aa12.52□□□□□ -0.4
GINS3-202ENST00000328514 CNTNAP5Q8WYK1 1306 aa12.52□□□□□ -0.4
GINS3-202ENST00000328514 TMCO5BA8MYB1 307 aa12.52□□□□□ -0.41
GINS3-202ENST00000328514 HMGB1P1B2RPK0 211 aaPredicted RBP12.52□□□□□ -0.41
GINS3-202ENST00000328514 PLEKHA8P1O95397 391 aa12.52□□□□□ -0.41
GINS3-202ENST00000328514 FAM107AO95990 144 aa12.52□□□□□ -0.41
GINS3-202ENST00000328514 CCNE1P24864 410 aa12.52□□□□□ -0.41
GINS3-202ENST00000328514 PAK2Q13177 524 aa12.52□□□□□ -0.41
GINS3-202ENST00000328514 CCDC96Q2M329 555 aa12.52□□□□□ -0.41
GINS3-202ENST00000328514 PREPLQ4J6C6 727 aaPredicted RBP12.52□□□□□ -0.41
GINS3-202ENST00000328514 WLSQ5T9L3 541 aa12.52□□□□□ -0.41
GINS3-202ENST00000328514 PPP4R3AQ6IN85 833 aa12.52□□□□□ -0.41
GINS3-202ENST00000328514 C8orf74Q6P047 294 aa12.52□□□□□ -0.41
GINS3-202ENST00000328514 TMED8Q6PL24 325 aaPredicted RBP12.52□□□□□ -0.41
GINS3-202ENST00000328514 GIGYF2Q6Y7W6 1299 aaKnown RBP12.52□□□□□ -0.41
GINS3-202ENST00000328514 KIF6Q6ZMV9 814 aa12.52□□□□□ -0.41
GINS3-202ENST00000328514 CSGALNACT2Q8N6G5 542 aa12.52□□□□□ -0.41
GINS3-202ENST00000328514 MAGEC3Q8TD91 643 aa12.52□□□□□ -0.41
GINS3-202ENST00000328514 ZNF473Q8WTR7 871 aaKnown RBP12.52□□□□□ -0.41
GINS3-202ENST00000328514 RNPC3Q96LT9 517 aaKnown RBP12.52□□□□□ -0.41
GINS3-202ENST00000328514 CCSER1Q9C0I3 900 aa12.52□□□□□ -0.41
GINS3-202ENST00000328514 CUEDC2Q9H467 287 aa12.52□□□□□ -0.41
GINS3-202ENST00000328514 H0YHG0 523 aa12.51□□□□□ -0.41
GINS3-202ENST00000328514 MYO1FO00160 1098 aa12.51□□□□□ -0.41
GINS3-202ENST00000328514 MDH1P40925 334 aaKnown RBP12.51□□□□□ -0.41
GINS3-202ENST00000328514 CFAP58Q5T655 872 aa12.51□□□□□ -0.41
GINS3-202ENST00000328514 NLRP10Q86W26 655 aa12.51□□□□□ -0.41
GINS3-202ENST00000328514 WHAMMQ8TF30 809 aa12.51□□□□□ -0.41
GINS3-202ENST00000328514 PIK3R5Q8WYR1 880 aa12.51□□□□□ -0.41
GINS3-202ENST00000328514 TLR10Q9BXR5 811 aa12.51□□□□□ -0.41
GINS3-202ENST00000328514 ARHGAP20Q9P2F6 1191 aa12.51□□□□□ -0.41
GINS3-202ENST00000328514 ABCB11O95342 1321 aa12.51□□□□□ -0.41
GINS3-202ENST00000328514 DUOX1Q9NRD9 1551 aa12.51□□□□□ -0.41
GINS3-202ENST00000328514 SLC5A1P13866 664 aa12.5□□□□□ -0.41
GINS3-202ENST00000328514 NR1D1P20393 614 aa12.5□□□□□ -0.41
GINS3-202ENST00000328514 KIF11P52732 1056 aa12.5□□□□□ -0.41
GINS3-202ENST00000328514 SLC7A5Q01650 507 aa12.5□□□□□ -0.41
GINS3-202ENST00000328514 NEDD9Q14511 834 aa12.5□□□□□ -0.41
GINS3-202ENST00000328514 CFAP221Q4G0U5 840 aa12.5□□□□□ -0.41
GINS3-202ENST00000328514 CCDC181Q5TID7 509 aa12.5□□□□□ -0.41
GINS3-202ENST00000328514 TTC19Q6DKK2 380 aaPredicted RBP12.5□□□□□ -0.41
GINS3-202ENST00000328514 NFRKBQ6P4R8 1299 aa12.5□□□□□ -0.41
GINS3-202ENST00000328514 PIK3AP1Q6ZUJ8 805 aa12.5□□□□□ -0.41
GINS3-202ENST00000328514 TAX1BP1Q86VP1 789 aa12.5□□□□□ -0.41
GINS3-202ENST00000328514 NLRP14Q86W24 1093 aa12.5□□□□□ -0.41
GINS3-202ENST00000328514 MYCBPAPQ8TBZ2 947 aa12.5□□□□□ -0.41
GINS3-202ENST00000328514 P2RX5Q93086 422 aa12.5□□□□□ -0.41
GINS3-202ENST00000328514 ZKSCAN4Q969J2 545 aaPredicted RBP12.5□□□□□ -0.41
GINS3-202ENST00000328514 ATP6V1G3Q96LB4 118 aa12.5□□□□□ -0.41
GINS3-202ENST00000328514 CCT8L2Q96SF2 557 aa12.5□□□□□ -0.41
GINS3-202ENST00000328514 EDEM3Q9BZQ6 932 aa12.5□□□□□ -0.41
GINS3-202ENST00000328514 ACTR5Q9H9F9 607 aaPredicted RBP12.5□□□□□ -0.41
GINS3-202ENST00000328514 KLC4Q9NSK0 619 aa12.5□□□□□ -0.41
GINS3-202ENST00000328514 GRID2IPA4D2P6 1211 aa12.5□□□□□ -0.41
GINS3-202ENST00000328514 PES1O00541 588 aaKnown RBP12.5□□□□□ -0.41
GINS3-202ENST00000328514 KRT14P02533 472 aa12.5□□□□□ -0.41
GINS3-202ENST00000328514 SCG2P13521 617 aa12.5□□□□□ -0.41
GINS3-202ENST00000328514 CALML3P27482 149 aa12.5□□□□□ -0.41
GINS3-202ENST00000328514 MCM7P33993 719 aa12.5□□□□□ -0.41
GINS3-202ENST00000328514 ITGB3BPQ13352 177 aaPredicted RBP12.5□□□□□ -0.41
GINS3-202ENST00000328514 PFKFB3Q16875 520 aaPredicted RBP12.5□□□□□ -0.41
GINS3-202ENST00000328514 ASTE1Q2TB18 679 aaPredicted RBP12.5□□□□□ -0.41
GINS3-202ENST00000328514 FKBP15Q5T1M5 1219 aa12.5□□□□□ -0.41
GINS3-202ENST00000328514 IFIT1BQ5T764 474 aaKnown RBP12.5□□□□□ -0.41
GINS3-202ENST00000328514 LRIG3Q6UXM1 1119 aa12.5□□□□□ -0.41
GINS3-202ENST00000328514 KRT26Q7Z3Y9 468 aa12.5□□□□□ -0.41
GINS3-202ENST00000328514 CNOT6LQ96LI5 555 aaKnown RBP12.5□□□□□ -0.41
GINS3-202ENST00000328514 JPH2Q9BR39 696 aaPredicted RBP12.5□□□□□ -0.41
GINS3-202ENST00000328514 MLXIPQ9HAP2 919 aa12.5□□□□□ -0.41
GINS3-202ENST00000328514 RBM12Q9NTZ6 932 aaKnown RBP12.5□□□□□ -0.41
GINS3-202ENST00000328514 SLAIN2Q9P270 581 aa12.5□□□□□ -0.41
GINS3-202ENST00000328514 MCM8Q9UJA3 840 aa12.5□□□□□ -0.41
GINS3-202ENST00000328514 SIK3Q9Y2K2 1263 aa12.5□□□□□ -0.41
GINS3-202ENST00000328514 RBAK-RBAKDNI3L0D1 243 aa12.49□□□□□ -0.41
GINS3-202ENST00000328514 LAD1O00515 517 aa12.49□□□□□ -0.41
GINS3-202ENST00000328514 MOCS3O95396 460 aa12.49□□□□□ -0.41
GINS3-202ENST00000328514 KLK7P49862 253 aa12.49□□□□□ -0.41
GINS3-202ENST00000328514 CCDC40Q4G0X9 1142 aa12.49□□□□□ -0.41
GINS3-202ENST00000328514 PROSER2Q86WR7 435 aaPredicted RBP12.49□□□□□ -0.41
GINS3-202ENST00000328514 CCDC50Q8IVM0 306 aa12.49□□□□□ -0.41
GINS3-202ENST00000328514 CCDC13Q8IYE1 715 aa12.49□□□□□ -0.41
GINS3-202ENST00000328514 SH2D3CQ8N5H7 860 aa12.49□□□□□ -0.41
GINS3-202ENST00000328514 ARFGAP2Q8N6H7 521 aa12.49□□□□□ -0.41
GINS3-202ENST00000328514 ZCRB1Q8TBF4 217 aaKnown RBP12.49□□□□□ -0.41
GINS3-202ENST00000328514 SMCR8Q8TEV9 937 aaPredicted RBP12.49□□□□□ -0.41
GINS3-202ENST00000328514 NOC4LQ9BVI4 516 aaKnown RBP12.49□□□□□ -0.41
GINS3-202ENST00000328514 RABEP2Q9H5N1 569 aa12.49□□□□□ -0.41
GINS3-202ENST00000328514 SH3GLB2Q9NR46 395 aa12.49□□□□□ -0.41
GINS3-202ENST00000328514 SSU72P8A0A1W2PR75 194 aa12.49□□□□□ -0.41
GINS3-202ENST00000328514 IRS4O14654 1257 aaPredicted RBP12.49□□□□□ -0.41
GINS3-202ENST00000328514 CLGNO14967 610 aa12.49□□□□□ -0.41
GINS3-202ENST00000328514 PDE8AO60658 829 aa12.49□□□□□ -0.41
GINS3-202ENST00000328514 GLI1P08151 1106 aa12.49□□□□□ -0.41
GINS3-202ENST00000328514 PLEKP08567 350 aaPredicted RBP12.49□□□□□ -0.41
GINS3-202ENST00000328514 HSPA9P38646 679 aaKnown RBP12.49□□□□□ -0.41
GINS3-202ENST00000328514 PRPHP41219 470 aa12.49□□□□□ -0.41
GINS3-202ENST00000328514 GUCY1A3Q02108 690 aa12.49□□□□□ -0.41
GINS3-202ENST00000328514 KLHDC7AQ5VTJ3 777 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 641.1 ms