RNA–Protein interactions for RNA: ENST00000327047.5

CLRN1-202, Transcript of clarin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLRN1, Length 2,359 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-202ENST00000327047 KCNJ12Q14500 433 aa8.18□□□□□ -1.1
CLRN1-202ENST00000327047 MFSD10Q14728 455 aa8.18□□□□□ -1.1
CLRN1-202ENST00000327047 TTF1Q15361 905 aaPredicted RBP8.18□□□□□ -1.1
CLRN1-202ENST00000327047 TSR1Q2NL82 804 aaKnown RBP8.18□□□□□ -1.1
CLRN1-202ENST00000327047 RRAGBQ5VZM2 374 aa8.18□□□□□ -1.1
CLRN1-202ENST00000327047 IQCEQ6IPM2 695 aa8.18□□□□□ -1.1
CLRN1-202ENST00000327047 SPATS2Q86XZ4 545 aaKnown RBP8.18□□□□□ -1.1
CLRN1-202ENST00000327047 TBC1D10CQ8IV04 446 aa8.18□□□□□ -1.1
CLRN1-202ENST00000327047 TTLL11Q8NHH1 800 aa8.18□□□□□ -1.1
CLRN1-202ENST00000327047 ZIM3Q96PE6 472 aa8.18□□□□□ -1.1
CLRN1-202ENST00000327047 CRISPLD2Q9H0B8 497 aa8.18□□□□□ -1.1
CLRN1-202ENST00000327047 EPN3Q9H201 632 aa8.18□□□□□ -1.1
CLRN1-202ENST00000327047 CABP5Q9NP86 173 aa8.18□□□□□ -1.1
CLRN1-202ENST00000327047 INCENPQ9NQS7 918 aa8.18□□□□□ -1.1
CLRN1-202ENST00000327047 DDX20Q9UHI6 824 aaKnown RBP8.18□□□□□ -1.1
CLRN1-202ENST00000327047 RIPOR2Q9Y4F9 1068 aa8.18□□□□□ -1.1
CLRN1-202ENST00000327047 SRPRBQ9Y5M8 271 aaKnown RBP8.18□□□□□ -1.1
CLRN1-202ENST00000327047 PPP1R12AO14974 1030 aaPredicted RBP8.17□□□□□ -1.1
CLRN1-202ENST00000327047 GPAA1O43292 621 aa8.17□□□□□ -1.1
CLRN1-202ENST00000327047 RASSF9O75901 435 aa8.17□□□□□ -1.1
CLRN1-202ENST00000327047 CXCR5P32302 372 aa8.17□□□□□ -1.1
CLRN1-202ENST00000327047 SMTNP53814 917 aa8.17□□□□□ -1.1
CLRN1-202ENST00000327047 E2F5Q15329 346 aa8.17□□□□□ -1.1
CLRN1-202ENST00000327047 RILPL1Q5EBL4 403 aa8.17□□□□□ -1.1
CLRN1-202ENST00000327047 TCP11X2Q5H9J9 407 aa8.17□□□□□ -1.1
CLRN1-202ENST00000327047 NAIF1Q69YI7 327 aaPredicted RBP8.17□□□□□ -1.1
CLRN1-202ENST00000327047 INTS5Q6P9B9 1019 aaKnown RBP8.17□□□□□ -1.1
CLRN1-202ENST00000327047 OR8K1Q8NGG5 319 aa8.17□□□□□ -1.1
CLRN1-202ENST00000327047 SMCR8Q8TEV9 937 aaPredicted RBP8.17□□□□□ -1.1
CLRN1-202ENST00000327047 CCDC114Q96M63 670 aa8.17□□□□□ -1.1
CLRN1-202ENST00000327047 FAM217BQ9NTX9 383 aaPredicted RBP8.17□□□□□ -1.1
CLRN1-202ENST00000327047 VPS54Q9P1Q0 977 aa8.17□□□□□ -1.1
CLRN1-202ENST00000327047 LUC7L2Q9Y383 392 aaKnown RBP8.17□□□□□ -1.1
CLRN1-202ENST00000327047 PDE4DIPQ5VU43 2346 aa8.17□□□□□ -1.1
CLRN1-202ENST00000327047 RPSAP08865 295 aaKnown RBP8.17□□□□□ -1.1
CLRN1-202ENST00000327047 EPB41P11171 864 aaKnown RBP8.17□□□□□ -1.1
CLRN1-202ENST00000327047 CLNS1AP54105 237 aaKnown RBP8.17□□□□□ -1.1
CLRN1-202ENST00000327047 EPHB4P54760 987 aa8.17□□□□□ -1.1
CLRN1-202ENST00000327047 CYP27A1Q02318 531 aa8.17□□□□□ -1.1
CLRN1-202ENST00000327047 TRIM14Q14142 442 aa8.17□□□□□ -1.1
CLRN1-202ENST00000327047 SCARF1Q14162 830 aa8.17□□□□□ -1.1
CLRN1-202ENST00000327047 SNCBQ16143 134 aa8.17□□□□□ -1.1
CLRN1-202ENST00000327047 SH3D19Q5HYK7 790 aa8.17□□□□□ -1.1
CLRN1-202ENST00000327047 HABP4Q5JVS0 413 aaKnown RBP8.17□□□□□ -1.1
CLRN1-202ENST00000327047 WLSQ5T9L3 541 aa8.17□□□□□ -1.1
CLRN1-202ENST00000327047 WDR59Q6PJI9 974 aa8.17□□□□□ -1.1
CLRN1-202ENST00000327047 TICAM2Q86XR7 235 aa8.17□□□□□ -1.1
CLRN1-202ENST00000327047 TEX11Q8IYF3 940 aa8.17□□□□□ -1.1
CLRN1-202ENST00000327047 MARCH10Q8NA82 808 aaPredicted RBP8.17□□□□□ -1.1
CLRN1-202ENST00000327047 ZNF579Q8NAF0 562 aaKnown RBP8.17□□□□□ -1.1
CLRN1-202ENST00000327047 EHBP1Q8NDI1 1231 aa8.17□□□□□ -1.1
CLRN1-202ENST00000327047 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.17□□□□□ -1.1
CLRN1-202ENST00000327047 SYMPKQ92797 1274 aaKnown RBP8.17□□□□□ -1.1
CLRN1-202ENST00000327047 CCDC85AQ96PX6 553 aaPredicted RBP8.17□□□□□ -1.1
CLRN1-202ENST00000327047 CCT8L2Q96SF2 557 aa8.17□□□□□ -1.1
CLRN1-202ENST00000327047 EMILIN3Q9NT22 766 aa8.17□□□□□ -1.1
CLRN1-202ENST00000327047 EHD2Q9NZN4 543 aa8.17□□□□□ -1.1
CLRN1-202ENST00000327047 LIMA1Q9UHB6 759 aaKnown RBP8.17□□□□□ -1.1
CLRN1-202ENST00000327047 A6NNZ2 444 aa8.16□□□□□ -1.1
CLRN1-202ENST00000327047 E7EVH7 732 aa8.16□□□□□ -1.1
CLRN1-202ENST00000327047 TBC1D12O60347 775 aa8.16□□□□□ -1.1
CLRN1-202ENST00000327047 SKAP2O75563 359 aaPredicted RBP8.16□□□□□ -1.1
CLRN1-202ENST00000327047 KRT83P78385 493 aa8.16□□□□□ -1.1
CLRN1-202ENST00000327047 TUBB8Q3ZCM7 444 aa8.16□□□□□ -1.1
CLRN1-202ENST00000327047 TMEM67Q5HYA8 995 aa8.16□□□□□ -1.1
CLRN1-202ENST00000327047 ALS2CLQ60I27 953 aa8.16□□□□□ -1.1
CLRN1-202ENST00000327047 PI16Q6UXB8 463 aa8.16□□□□□ -1.1
CLRN1-202ENST00000327047 KIF6Q6ZMV9 814 aa8.16□□□□□ -1.1
CLRN1-202ENST00000327047 YTHDF3Q7Z739 585 aaKnown RBP8.16□□□□□ -1.1
CLRN1-202ENST00000327047 ZNF467Q7Z7K2 595 aaPredicted RBP8.16□□□□□ -1.1
CLRN1-202ENST00000327047 NLRP14Q86W24 1093 aa8.16□□□□□ -1.1
CLRN1-202ENST00000327047 CREG2Q8IUH2 290 aa8.16□□□□□ -1.1
CLRN1-202ENST00000327047 ZNF34Q8IZ26 560 aa8.16□□□□□ -1.1
CLRN1-202ENST00000327047 EFCAB3Q8N7B9 438 aa8.16□□□□□ -1.1
CLRN1-202ENST00000327047 VGLL2Q8N8G2 317 aa8.16□□□□□ -1.1
CLRN1-202ENST00000327047 MYCBPAPQ8TBZ2 947 aa8.16□□□□□ -1.1
CLRN1-202ENST00000327047 PBXIP1Q96AQ6 731 aa8.16□□□□□ -1.1
CLRN1-202ENST00000327047 CCDC43Q96MW1 224 aaKnown RBP8.16□□□□□ -1.1
CLRN1-202ENST00000327047 GREM2Q9H772 168 aa8.16□□□□□ -1.1
CLRN1-202ENST00000327047 PPANQ9NQ55 473 aaKnown RBP8.16□□□□□ -1.1
CLRN1-202ENST00000327047 CEP126Q9P2H0 1117 aa8.16□□□□□ -1.1
CLRN1-202ENST00000327047 RIC1Q4ADV7 1423 aa8.16□□□□□ -1.1
CLRN1-202ENST00000327047 FAM205CA6NFA0 338 aa8.15□□□□□ -1.1
CLRN1-202ENST00000327047 LRRC10BA6NIK2 292 aa8.15□□□□□ -1.1
CLRN1-202ENST00000327047 ERVV-1B6SEH8 477 aa8.15□□□□□ -1.1
CLRN1-202ENST00000327047 ATP2C2O75185 946 aa8.15□□□□□ -1.1
CLRN1-202ENST00000327047 ZNF16P17020 682 aaPredicted RBP8.15□□□□□ -1.1
CLRN1-202ENST00000327047 NR1D1P20393 614 aa8.15□□□□□ -1.1
CLRN1-202ENST00000327047 IL6STP40189 918 aaPredicted RBP8.15□□□□□ -1.1
CLRN1-202ENST00000327047 TAGLNQ01995 201 aaKnown RBP8.15□□□□□ -1.1
CLRN1-202ENST00000327047 MAP2K1Q02750 393 aaPredicted RBP8.15□□□□□ -1.1
CLRN1-202ENST00000327047 PTGISQ16647 500 aa8.15□□□□□ -1.1
CLRN1-202ENST00000327047 CCDC57Q2TAC2 916 aa8.15□□□□□ -1.1
CLRN1-202ENST00000327047 CCDC121Q6ZUS5 278 aa8.15□□□□□ -1.1
CLRN1-202ENST00000327047 FAM228AQ86W67 206 aa8.15□□□□□ -1.1
CLRN1-202ENST00000327047 EGFL6Q8IUX8 553 aa8.15□□□□□ -1.1
CLRN1-202ENST00000327047 MMGT1Q8N4V1 131 aa8.15□□□□□ -1.1
CLRN1-202ENST00000327047 SPATA4Q8NEY3 305 aa8.15□□□□□ -1.1
CLRN1-202ENST00000327047 NELFBQ8WX92 580 aa8.15□□□□□ -1.1
CLRN1-202ENST00000327047 GSDMAQ96QA5 445 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms