RNA–Protein interactions for RNA: ENST00000326195.12

ABCF1-201, Transcript of ATP binding cassette subfamily F member 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene ABCF1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-201ENST00000326195 CNNM2Q9H8M5 875 aa11.6□□□□□ -0.55
ABCF1-201ENST00000326195 FAM204AQ9H8W3 233 aa11.6□□□□□ -0.55
ABCF1-201ENST00000326195 LRRIQ3A6PVS8 624 aaPredicted RBP11.59□□□□□ -0.55
ABCF1-201ENST00000326195 PLEKHA8P1O95397 391 aa11.59□□□□□ -0.55
ABCF1-201ENST00000326195 SYKP43405 635 aa11.59□□□□□ -0.55
ABCF1-201ENST00000326195 PDILTQ8N807 584 aa11.59□□□□□ -0.55
ABCF1-201ENST00000326195 ANKRD20A12PQ8NF67 263 aa11.59□□□□□ -0.55
ABCF1-201ENST00000326195 STAG1Q8WVM7 1258 aa11.59□□□□□ -0.55
ABCF1-201ENST00000326195 CCDC102AQ96A19 550 aa11.59□□□□□ -0.55
ABCF1-201ENST00000326195 ZNF287Q9HBT7 754 aa11.59□□□□□ -0.55
ABCF1-201ENST00000326195 FBXO28Q9NVF7 368 aa11.59□□□□□ -0.55
ABCF1-201ENST00000326195 PCDHA7Q9UN72 937 aa11.59□□□□□ -0.55
ABCF1-201ENST00000326195 ADAMTSL1Q8N6G6 1762 aa11.59□□□□□ -0.55
ABCF1-201ENST00000326195 MNAT1P51948 309 aa11.59□□□□□ -0.55
ABCF1-201ENST00000326195 PLS1Q14651 629 aa11.59□□□□□ -0.55
ABCF1-201ENST00000326195 BRAPQ7Z569 592 aa11.59□□□□□ -0.55
ABCF1-201ENST00000326195 EFCAB13Q8IY85 973 aa11.59□□□□□ -0.55
ABCF1-201ENST00000326195 ZNF654Q8IZM8 581 aa11.59□□□□□ -0.55
ABCF1-201ENST00000326195 SMARCC2Q8TAQ2 1214 aa11.59□□□□□ -0.55
ABCF1-201ENST00000326195 TANGO6Q9C0B7 1094 aa11.59□□□□□ -0.55
ABCF1-201ENST00000326195 KIAA1468Q9P260 1216 aa11.59□□□□□ -0.55
ABCF1-201ENST00000326195 V9GY48 417 aaPredicted RBP11.59□□□□□ -0.55
ABCF1-201ENST00000326195 CNTNAP1P78357 1384 aa11.59□□□□□ -0.55
ABCF1-201ENST00000326195 HMGCS2P54868 508 aa11.59□□□□□ -0.55
ABCF1-201ENST00000326195 HDXQ7Z353 690 aa11.59□□□□□ -0.55
ABCF1-201ENST00000326195 IDI2Q9BXS1 227 aa11.59□□□□□ -0.55
ABCF1-201ENST00000326195 DHX36Q9H2U1 1008 aaKnown RBP11.59□□□□□ -0.55
ABCF1-201ENST00000326195 RFX7Q2KHR2 1363 aa11.58□□□□□ -0.55
ABCF1-201ENST00000326195 RHOXF2BP0C7M4 288 aa11.58□□□□□ -0.56
ABCF1-201ENST00000326195 SCP2P22307 547 aa11.58□□□□□ -0.56
ABCF1-201ENST00000326195 CDC27P30260 824 aa11.58□□□□□ -0.56
ABCF1-201ENST00000326195 VSNL1P62760 191 aa11.58□□□□□ -0.56
ABCF1-201ENST00000326195 MTF1Q14872 753 aa11.58□□□□□ -0.56
ABCF1-201ENST00000326195 BRD3Q15059 726 aa11.58□□□□□ -0.56
ABCF1-201ENST00000326195 ALX1Q15699 326 aa11.58□□□□□ -0.56
ABCF1-201ENST00000326195 USH1GQ495M9 461 aa11.58□□□□□ -0.56
ABCF1-201ENST00000326195 ADALQ6DHV7 355 aa11.58□□□□□ -0.56
ABCF1-201ENST00000326195 GADL1Q6ZQY3 521 aa11.58□□□□□ -0.56
ABCF1-201ENST00000326195 RHOXF2Q9BQY4 288 aa11.58□□□□□ -0.56
ABCF1-201ENST00000326195 EHD4Q9H223 541 aa11.58□□□□□ -0.56
ABCF1-201ENST00000326195 CSADQ9Y600 493 aa11.58□□□□□ -0.56
ABCF1-201ENST00000326195 SLC1A4P43007 532 aa11.58□□□□□ -0.56
ABCF1-201ENST00000326195 SSRP1Q08945 709 aaKnown RBP11.58□□□□□ -0.56
ABCF1-201ENST00000326195 MTMR2Q13614 643 aa11.58□□□□□ -0.56
ABCF1-201ENST00000326195 CASP8Q14790 479 aa11.58□□□□□ -0.56
ABCF1-201ENST00000326195 MYSM1Q5VVJ2 828 aa11.58□□□□□ -0.56
ABCF1-201ENST00000326195 ANO1Q5XXA6 986 aa11.58□□□□□ -0.56
ABCF1-201ENST00000326195 CCDC174Q6PII3 467 aa11.58□□□□□ -0.56
ABCF1-201ENST00000326195 C16orf86Q6ZW13 317 aa11.58□□□□□ -0.56
ABCF1-201ENST00000326195 FOXP4Q8IVH2 680 aaPredicted RBP11.58□□□□□ -0.56
ABCF1-201ENST00000326195 CTCFLQ8NI51 663 aaPredicted RBP11.58□□□□□ -0.56
ABCF1-201ENST00000326195 RIN2Q8WYP3 895 aaPredicted RBP11.58□□□□□ -0.56
ABCF1-201ENST00000326195 GPKOWQ92917 476 aaPredicted RBP eCLIP11.58□□□□□ -0.567e-16■□□□□ 10.7
ABCF1-201ENST00000326195 POLR2AP24928 1970 aaKnown RBP11.58□□□□□ -0.56
ABCF1-201ENST00000326195 A0A1W2PRG0 241 aa11.58□□□□□ -0.56
ABCF1-201ENST00000326195 ENTPD3O75355 529 aa11.58□□□□□ -0.56
ABCF1-201ENST00000326195 HUNKP57058 714 aa11.58□□□□□ -0.56
ABCF1-201ENST00000326195 CHMP4BP1P59074 171 aa11.58□□□□□ -0.56
ABCF1-201ENST00000326195 SUPT20HL1Q3ZLR7 823 aa11.58□□□□□ -0.56
ABCF1-201ENST00000326195 APOA5Q6Q788 366 aa11.58□□□□□ -0.56
ABCF1-201ENST00000326195 APOBEC3FQ8IUX4 373 aaKnown RBP11.58□□□□□ -0.56
ABCF1-201ENST00000326195 IGDCC4Q8TDY8 1250 aa11.58□□□□□ -0.56
ABCF1-201ENST00000326195 MRPL44Q9H9J2 332 aaKnown RBP11.58□□□□□ -0.56
ABCF1-201ENST00000326195 LY9Q9HBG7 655 aa11.58□□□□□ -0.56
ABCF1-201ENST00000326195 CLIC4Q9Y696 253 aa11.58□□□□□ -0.56
ABCF1-201ENST00000326195 A0A087WUV0 522 aaPredicted RBP11.57□□□□□ -0.56
ABCF1-201ENST00000326195 PPFIA4O75335 1185 aa11.57□□□□□ -0.56
ABCF1-201ENST00000326195 ADKP55263 362 aaKnown RBP11.57□□□□□ -0.56
ABCF1-201ENST00000326195 UBASH3AP57075 661 aa11.57□□□□□ -0.56
ABCF1-201ENST00000326195 RTN1Q16799 776 aa11.57□□□□□ -0.56
ABCF1-201ENST00000326195 CCDC12Q8WUD4 166 aaPredicted RBP11.57□□□□□ -0.56
ABCF1-201ENST00000326195 INTS13Q9NVM9 706 aa11.57□□□□□ -0.56
ABCF1-201ENST00000326195 BRCA2P51587 3418 aa11.57□□□□□ -0.56
ABCF1-201ENST00000326195 SH2B2O14492 632 aaPredicted RBP11.57□□□□□ -0.56
ABCF1-201ENST00000326195 CUTAO60888 179 aa11.57□□□□□ -0.56
ABCF1-201ENST00000326195 ZNF202O95125 648 aa11.57□□□□□ -0.56
ABCF1-201ENST00000326195 EXOSC10Q01780 885 aaKnown RBP11.57□□□□□ -0.56
ABCF1-201ENST00000326195 ERLIN2O94905 339 aa11.56□□□□□ -0.56
ABCF1-201ENST00000326195 XBP1P17861 261 aa11.56□□□□□ -0.56
ABCF1-201ENST00000326195 PNMA8AQ86V59 439 aaPredicted RBP11.56□□□□□ -0.56
ABCF1-201ENST00000326195 HNRNPLLQ8WVV9 542 aaKnown RBP11.56□□□□□ -0.56
ABCF1-201ENST00000326195 WASF1Q92558 559 aa11.56□□□□□ -0.56
ABCF1-201ENST00000326195 SLC10A4Q96EP9 437 aa11.56□□□□□ -0.56
ABCF1-201ENST00000326195 TEPSINQ96N21 525 aa11.56□□□□□ -0.56
ABCF1-201ENST00000326195 ZBTB21Q9ULJ3 1066 aa11.56□□□□□ -0.56
ABCF1-201ENST00000326195 KCNJ14Q9UNX9 436 aa11.56□□□□□ -0.56
ABCF1-201ENST00000326195 CTDP1Q9Y5B0 961 aaPredicted RBP11.56□□□□□ -0.56
ABCF1-201ENST00000326195 SYF2O95926 243 aaKnown RBP11.56□□□□□ -0.56
ABCF1-201ENST00000326195 FKBP1AP62942 108 aaKnown RBP11.56□□□□□ -0.56
ABCF1-201ENST00000326195 DHX8Q14562 1220 aaKnown RBP11.56□□□□□ -0.56
ABCF1-201ENST00000326195 SBK1Q52WX2 424 aa11.56□□□□□ -0.56
ABCF1-201ENST00000326195 FAM83BQ5T0W9 1011 aa11.56□□□□□ -0.56
ABCF1-201ENST00000326195 SLFN13Q68D06 897 aa11.56□□□□□ -0.56
ABCF1-201ENST00000326195 MED4Q9NPJ6 270 aa11.56□□□□□ -0.56
ABCF1-201ENST00000326195 CTDNEP1O95476 244 aa11.56□□□□□ -0.56
ABCF1-201ENST00000326195 YEATS4O95619 227 aa11.56□□□□□ -0.56
ABCF1-201ENST00000326195 GUCY1A2P33402 732 aa11.56□□□□□ -0.56
ABCF1-201ENST00000326195 VGLL4Q14135 290 aa11.56□□□□□ -0.56
ABCF1-201ENST00000326195 JAKMIP3Q5VZ66 844 aa11.56□□□□□ -0.56
ABCF1-201ENST00000326195 RASSF8Q8NHQ8 419 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms