RNA–Protein interactions for RNA: ENST00000322344.7

PNKP-201, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-201ENST00000322344 ZNF543Q08ER8 600 aa25.03■■□□□ 1.6
PNKP-201ENST00000322344 TSR1Q2NL82 804 aaKnown RBP25.03■■□□□ 1.6
PNKP-201ENST00000322344 ZNF569Q5MCW4 686 aa25.03■■□□□ 1.6
PNKP-201ENST00000322344 RETREG2Q8NC44 543 aa25.03■■□□□ 1.6
PNKP-201ENST00000322344 ACRBPQ8NEB7 543 aa25.03■■□□□ 1.6
PNKP-201ENST00000322344 IRX2Q9BZI1 471 aaPredicted RBP25.03■■□□□ 1.6
PNKP-201ENST00000322344 USP40Q9NVE5 1235 aa25.03■■□□□ 1.6
PNKP-201ENST00000322344 ATP8B1O43520 1251 aa25.02■■□□□ 1.6
PNKP-201ENST00000322344 PDIA5Q14554 519 aa25.02■■□□□ 1.6
PNKP-201ENST00000322344 HHIPL2Q6UWX4 724 aa25.02■■□□□ 1.6
PNKP-201ENST00000322344 CEP112Q8N8E3 955 aa25.02■■□□□ 1.6
PNKP-201ENST00000322344 RIC8AQ9NPQ8 531 aa25.02■■□□□ 1.6
PNKP-201ENST00000322344 DDX4Q9NQI0 724 aaKnown RBP25.02■■□□□ 1.6
PNKP-201ENST00000322344 CDC23Q9UJX2 597 aa25.02■■□□□ 1.6
PNKP-201ENST00000322344 TTC26A0AVF1 554 aa25.02■■□□□ 1.6
PNKP-201ENST00000322344 CTAGE9A4FU28 777 aa25.02■■□□□ 1.6
PNKP-201ENST00000322344 HLA-DOAP06340 250 aa25.02■■□□□ 1.6
PNKP-201ENST00000322344 GPATCH4Q5T3I0 446 aaKnown RBP25.02■■□□□ 1.6
PNKP-201ENST00000322344 CERS5Q8N5B7 392 aa25.02■■□□□ 1.6
PNKP-201ENST00000322344 COA7Q96BR5 231 aa25.02■■□□□ 1.6
PNKP-201ENST00000322344 TUBGCP2Q9BSJ2 902 aa25.02■■□□□ 1.6
PNKP-201ENST00000322344 PVALEFA0A1B0GWK0 134 aa25.01■■□□□ 1.59
PNKP-201ENST00000322344 NPR1P16066 1061 aa25.01■■□□□ 1.59
PNKP-201ENST00000322344 STK4Q13043 487 aa25.01■■□□□ 1.59
PNKP-201ENST00000322344 LRRC27Q9C0I9 530 aa25.01■■□□□ 1.59
PNKP-201ENST00000322344 GPCPD1Q9NPB8 672 aa25.01■■□□□ 1.59
PNKP-201ENST00000322344 EPN1Q9Y6I3 576 aaPredicted RBP25.01■■□□□ 1.59
PNKP-201ENST00000322344 F8W031 263 aaPredicted RBP25■■□□□ 1.59
PNKP-201ENST00000322344 PES1O00541 588 aaKnown RBP25■■□□□ 1.59
PNKP-201ENST00000322344 ZRANB2O95218 330 aaKnown RBP eCLIP25■■□□□ 1.59
PNKP-201ENST00000322344 GRB10Q13322 594 aa25■■□□□ 1.59
PNKP-201ENST00000322344 TEX35Q5T0J7 233 aa25■■□□□ 1.59
PNKP-201ENST00000322344 SRGAP1Q7Z6B7 1085 aa25■■□□□ 1.59
PNKP-201ENST00000322344 CDK5RAP3Q96JB5 506 aa25■■□□□ 1.59
PNKP-201ENST00000322344 JMJD4Q9H9V9 463 aa25■■□□□ 1.59
PNKP-201ENST00000322344 ANKRD40Q6AI12 368 aa25■■□□□ 1.59
PNKP-201ENST00000322344 PPP4R3AQ6IN85 833 aa25■■□□□ 1.59
PNKP-201ENST00000322344 IQCDQ96DY2 449 aa25■■□□□ 1.59
PNKP-201ENST00000322344 CNOT6LQ96LI5 555 aaKnown RBP25■■□□□ 1.59
PNKP-201ENST00000322344 A0A0U1RQJ8 604 aa24.99■■□□□ 1.59
PNKP-201ENST00000322344 NDUFA10O95299 355 aa24.99■■□□□ 1.59
PNKP-201ENST00000322344 ALDH1B1P30837 517 aa24.99■■□□□ 1.59
PNKP-201ENST00000322344 SHMT1P34896 483 aa24.99■■□□□ 1.59
PNKP-201ENST00000322344 ARHGAP25P42331 645 aa24.99■■□□□ 1.59
PNKP-201ENST00000322344 KIF4BQ2VIQ3 1234 aa24.99■■□□□ 1.59
PNKP-201ENST00000322344 UNC13DQ70J99 1090 aa24.99■■□□□ 1.59
PNKP-201ENST00000322344 ATRIPQ8WXE1 791 aa24.99■■□□□ 1.59
PNKP-201ENST00000322344 NAPGQ99747 312 aaPredicted RBP24.99■■□□□ 1.59
PNKP-201ENST00000322344 BLOC1S4Q9NUP1 217 aa24.99■■□□□ 1.59
PNKP-201ENST00000322344 FHOD1Q9Y613 1164 aa24.99■■□□□ 1.59
PNKP-201ENST00000322344 ADGRF4Q8IZF3 695 aa24.98■■□□□ 1.59
PNKP-201ENST00000322344 SLC35F6Q8N357 371 aa24.98■■□□□ 1.59
PNKP-201ENST00000322344 LARP4BQ92615 738 aaKnown RBP24.98■■□□□ 1.59
PNKP-201ENST00000322344 TEKT1Q969V4 418 aa24.98■■□□□ 1.59
PNKP-201ENST00000322344 CCDC17Q96LX7 622 aa24.98■■□□□ 1.59
PNKP-201ENST00000322344 PNMA5Q96PV4 448 aa24.98■■□□□ 1.59
PNKP-201ENST00000322344 NAP1L4Q99733 375 aaKnown RBP24.98■■□□□ 1.59
PNKP-201ENST00000322344 SLF1Q9BQI6 1058 aa24.98■■□□□ 1.59
PNKP-201ENST00000322344 EHD4Q9H223 541 aa24.98■■□□□ 1.59
PNKP-201ENST00000322344 B4DLN1 442 aa24.98■■□□□ 1.59
PNKP-201ENST00000322344 MRPL12P52815 198 aaKnown RBP24.98■■□□□ 1.59
PNKP-201ENST00000322344 EIF6P56537 245 aaKnown RBP24.98■■□□□ 1.59
PNKP-201ENST00000322344 CDC42EP5Q6NZY7 148 aa24.98■■□□□ 1.59
PNKP-201ENST00000322344 NLGN1Q8N2Q7 840 aa24.98■■□□□ 1.59
PNKP-201ENST00000322344 CUL5Q93034 780 aa24.98■■□□□ 1.59
PNKP-201ENST00000322344 TMX4Q9H1E5 349 aaPredicted RBP24.98■■□□□ 1.59
PNKP-201ENST00000322344 MYH8P13535 1937 aa24.97■■□□□ 1.59
PNKP-201ENST00000322344 SLC37A4O43826 429 aa24.97■■□□□ 1.59
PNKP-201ENST00000322344 TDP2O95551 362 aa24.97■■□□□ 1.59
PNKP-201ENST00000322344 PNMA6AP0CW24 399 aaPredicted RBP24.97■■□□□ 1.59
PNKP-201ENST00000322344 FCER1AP12319 257 aa24.97■■□□□ 1.59
PNKP-201ENST00000322344 MTIF2P46199 727 aaKnown RBP24.97■■□□□ 1.59
PNKP-201ENST00000322344 CLK2P49760 499 aaKnown RBP24.97■■□□□ 1.59
PNKP-201ENST00000322344 CHMP4BP1P59074 171 aa24.97■■□□□ 1.59
PNKP-201ENST00000322344 TBC1D8BQ0IIM8 1120 aa24.97■■□□□ 1.59
PNKP-201ENST00000322344 MEA1Q16626 185 aa24.97■■□□□ 1.59
PNKP-201ENST00000322344 FIGNQ5HY92 759 aa24.97■■□□□ 1.59
PNKP-201ENST00000322344 KRT79Q5XKE5 535 aa24.97■■□□□ 1.59
PNKP-201ENST00000322344 CENPPQ6IPU0 288 aa24.97■■□□□ 1.59
PNKP-201ENST00000322344 CHP1Q99653 195 aa24.97■■□□□ 1.59
PNKP-201ENST00000322344 GLT8D2Q9H1C3 349 aa24.97■■□□□ 1.59
PNKP-201ENST00000322344 ANKRD31Q8N7Z5 1873 aa24.97■■□□□ 1.59
PNKP-201ENST00000322344 FGFR1OPO95684 399 aaKnown RBP24.96■■□□□ 1.59
PNKP-201ENST00000322344 GCFC2P16383 781 aaKnown RBP24.96■■□□□ 1.59
PNKP-201ENST00000322344 ZNF662Q6ZS27 426 aa24.96■■□□□ 1.59
PNKP-201ENST00000322344 ZSCAN29Q8IWY8 852 aaPredicted RBP24.96■■□□□ 1.59
PNKP-201ENST00000322344 KIAA0895Q8NCT3 520 aa24.96■■□□□ 1.59
PNKP-201ENST00000322344 MTMR8Q96EF0 704 aa24.96■■□□□ 1.59
PNKP-201ENST00000322344 TTYH3Q9C0H2 523 aa24.96■■□□□ 1.59
PNKP-201ENST00000322344 HAUS4Q9H6D7 363 aa24.96■■□□□ 1.59
PNKP-201ENST00000322344 ZNHIT6Q9NWK9 470 aaKnown RBP24.96■■□□□ 1.59
PNKP-201ENST00000322344 POTEB2H3BUK9 544 aa24.96■■□□□ 1.59
PNKP-201ENST00000322344 EDIL3O43854 480 aa24.96■■□□□ 1.59
PNKP-201ENST00000322344 TNNI2P48788 182 aa24.96■■□□□ 1.59
PNKP-201ENST00000322344 RAD54LQ92698 747 aa24.96■■□□□ 1.59
PNKP-201ENST00000322344 A0A1W2PQJ5 194 aa24.95■■□□□ 1.58
PNKP-201ENST00000322344 ZBTB5O15062 677 aa24.95■■□□□ 1.58
PNKP-201ENST00000322344 TRIM37O94972 964 aa24.95■■□□□ 1.58
PNKP-201ENST00000322344 KRT83P78385 493 aa24.95■■□□□ 1.58
PNKP-201ENST00000322344 ZBED6P86452 979 aa24.95■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms