RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 ZNHIT6Q9NWK9 470 aaKnown RBP19.46■□□□□ 0.71
COL9A1-201ENST00000320755 CCDC151A5D8V7 595 aa19.46■□□□□ 0.71
COL9A1-201ENST00000320755 SLC37A4O43826 429 aa19.46■□□□□ 0.71
COL9A1-201ENST00000320755 SERPINB2P05120 415 aa19.46■□□□□ 0.71
COL9A1-201ENST00000320755 HERVK_113P62684 666 aa19.46■□□□□ 0.71
COL9A1-201ENST00000320755 ST5P78524 1137 aa19.46■□□□□ 0.71
COL9A1-201ENST00000320755 DPP8Q6V1X1 898 aaPredicted RBP19.46■□□□□ 0.71
COL9A1-201ENST00000320755 MXD3Q9BW11 206 aa19.46■□□□□ 0.71
COL9A1-201ENST00000320755 ABCB6Q9NP58 842 aa19.46■□□□□ 0.71
COL9A1-201ENST00000320755 TNRC6CQ9HCJ0 1690 aaKnown RBP19.46■□□□□ 0.71
COL9A1-201ENST00000320755 MACROD2A1Z1Q3 448 aa19.45■□□□□ 0.7
COL9A1-201ENST00000320755 UBE2SQ16763 222 aa19.45■□□□□ 0.7
COL9A1-201ENST00000320755 SV2BQ7L1I2 683 aa19.45■□□□□ 0.7
COL9A1-201ENST00000320755 SNED1Q8TER0 1413 aa19.45■□□□□ 0.7
COL9A1-201ENST00000320755 DNAJC7Q99615 494 aa19.45■□□□□ 0.7
COL9A1-201ENST00000320755 A0A1W2PQC6 194 aa19.45■□□□□ 0.7
COL9A1-201ENST00000320755 TOM1O60784 492 aa19.45■□□□□ 0.7
COL9A1-201ENST00000320755 MYL1P05976 194 aa19.45■□□□□ 0.7
COL9A1-201ENST00000320755 SRGNP10124 158 aa19.45■□□□□ 0.7
COL9A1-201ENST00000320755 PDHBP11177 359 aa19.45■□□□□ 0.7
COL9A1-201ENST00000320755 AKR1B1P15121 316 aa19.45■□□□□ 0.7
COL9A1-201ENST00000320755 SLC16A2P36021 539 aa19.45■□□□□ 0.7
COL9A1-201ENST00000320755 AMPD3Q01432 767 aa19.45■□□□□ 0.7
COL9A1-201ENST00000320755 KIAA0895Q8NCT3 520 aa19.45■□□□□ 0.7
COL9A1-201ENST00000320755 LACRTQ9GZZ8 138 aa19.45■□□□□ 0.7
COL9A1-201ENST00000320755 BICDL2A1A5D9 508 aa19.45■□□□□ 0.7
COL9A1-201ENST00000320755 MARCH6O60337 910 aa19.45■□□□□ 0.7
COL9A1-201ENST00000320755 IPO7O95373 1038 aaKnown RBP19.45■□□□□ 0.7
COL9A1-201ENST00000320755 ATP1A1P05023 1023 aaKnown RBP19.45■□□□□ 0.7
COL9A1-201ENST00000320755 PLCG2P16885 1265 aa19.45■□□□□ 0.7
COL9A1-201ENST00000320755 ATP2B4P23634 1241 aa19.45■□□□□ 0.7
COL9A1-201ENST00000320755 VSNL1P62760 191 aa19.45■□□□□ 0.7
COL9A1-201ENST00000320755 BRD3Q15059 726 aa19.45■□□□□ 0.7
COL9A1-201ENST00000320755 LRRC41Q15345 812 aa19.45■□□□□ 0.7
COL9A1-201ENST00000320755 HINFPQ9BQA5 517 aa19.45■□□□□ 0.7
COL9A1-201ENST00000320755 NUDT12Q9BQG2 462 aa19.45■□□□□ 0.7
COL9A1-201ENST00000320755 FAM207AQ9NSI2 230 aaPredicted RBP19.45■□□□□ 0.7
COL9A1-201ENST00000320755 RCCD1A6NED2 376 aa19.44■□□□□ 0.7
COL9A1-201ENST00000320755 MYMKA6NI61 221 aa19.44■□□□□ 0.7
COL9A1-201ENST00000320755 RASSF10A6NK89 507 aa19.44■□□□□ 0.7
COL9A1-201ENST00000320755 SSBP05455 408 aaKnown RBP eCLIP19.44■□□□□ 0.7
COL9A1-201ENST00000320755 NEK11Q8NG66 645 aa19.44■□□□□ 0.7
COL9A1-201ENST00000320755 SEMA6BQ9H3T3 888 aa19.44■□□□□ 0.7
COL9A1-201ENST00000320755 NHEJ1Q9H9Q4 299 aaPredicted RBP19.44■□□□□ 0.7
COL9A1-201ENST00000320755 MPHOSPH10O00566 681 aaKnown RBP19.44■□□□□ 0.7
COL9A1-201ENST00000320755 PLEKP08567 350 aaPredicted RBP19.44■□□□□ 0.7
COL9A1-201ENST00000320755 SCNN1DP51172 638 aa19.44■□□□□ 0.7
COL9A1-201ENST00000320755 TTBK2Q6IQ55 1244 aa19.44■□□□□ 0.7
COL9A1-201ENST00000320755 KRT26Q7Z3Y9 468 aa19.44■□□□□ 0.7
COL9A1-201ENST00000320755 TBC1D16Q8TBP0 767 aa19.44■□□□□ 0.7
COL9A1-201ENST00000320755 C7orf25Q9BPX7 421 aa19.44■□□□□ 0.7
COL9A1-201ENST00000320755 PDE11AQ9HCR9 933 aa19.44■□□□□ 0.7
COL9A1-201ENST00000320755 DAGLAQ9Y4D2 1042 aa19.44■□□□□ 0.7
COL9A1-201ENST00000320755 ATP8B1O43520 1251 aa19.43■□□□□ 0.7
COL9A1-201ENST00000320755 GRB10Q13322 594 aa19.43■□□□□ 0.7
COL9A1-201ENST00000320755 JAKMIP2Q96AA8 810 aa19.43■□□□□ 0.7
COL9A1-201ENST00000320755 RBM17Q96I25 401 aaKnown RBP19.43■□□□□ 0.7
COL9A1-201ENST00000320755 CUEDC2Q9H467 287 aa19.43■□□□□ 0.7
COL9A1-201ENST00000320755 ADCY7P51828 1080 aa19.43■□□□□ 0.7
COL9A1-201ENST00000320755 WHAMMP3Q1A5X7 153 aa19.43■□□□□ 0.7
COL9A1-201ENST00000320755 HAUS4Q9H6D7 363 aa19.43■□□□□ 0.7
COL9A1-201ENST00000320755 MMRN2Q9H8L6 949 aa19.43■□□□□ 0.7
COL9A1-201ENST00000320755 MTMR4Q9NYA4 1195 aa19.43■□□□□ 0.7
COL9A1-201ENST00000320755 H3BQF6 201 aa19.43■□□□□ 0.7
COL9A1-201ENST00000320755 IL1R1P14778 569 aa19.43■□□□□ 0.7
COL9A1-201ENST00000320755 BEND6Q5SZJ8 279 aaPredicted RBP19.43■□□□□ 0.7
COL9A1-201ENST00000320755 FKBP15Q5T1M5 1219 aa19.43■□□□□ 0.7
COL9A1-201ENST00000320755 CNNM4Q6P4Q7 775 aa19.43■□□□□ 0.7
COL9A1-201ENST00000320755 GLIS3Q8NEA6 775 aa19.43■□□□□ 0.7
COL9A1-201ENST00000320755 SNX29Q8TEQ0 813 aa19.43■□□□□ 0.7
COL9A1-201ENST00000320755 DRC1Q96MC2 740 aa19.43■□□□□ 0.7
COL9A1-201ENST00000320755 MYO1AQ9UBC5 1043 aa19.43■□□□□ 0.7
COL9A1-201ENST00000320755 BLOC1S4Q9NUP1 217 aa19.42■□□□□ 0.7
COL9A1-201ENST00000320755 CYLC1P35663 651 aaPredicted RBP19.42■□□□□ 0.7
COL9A1-201ENST00000320755 CCDC96Q2M329 555 aa19.42■□□□□ 0.7
COL9A1-201ENST00000320755 MIIPQ5JXC2 388 aa19.42■□□□□ 0.7
COL9A1-201ENST00000320755 FAM114A1Q8IWE2 563 aa19.42■□□□□ 0.7
COL9A1-201ENST00000320755 NOC3LQ8WTT2 800 aaKnown RBP19.42■□□□□ 0.7
COL9A1-201ENST00000320755 UBAP1LF5GYI3 381 aa19.41■□□□□ 0.7
COL9A1-201ENST00000320755 ZMYND10O75800 440 aa19.41■□□□□ 0.7
COL9A1-201ENST00000320755 KRT83P78385 493 aa19.41■□□□□ 0.7
COL9A1-201ENST00000320755 AMPD2Q01433 879 aa19.41■□□□□ 0.7
COL9A1-201ENST00000320755 TMEM266Q2M3C6 531 aa19.41■□□□□ 0.7
COL9A1-201ENST00000320755 KCTD1Q719H9 257 aa19.41■□□□□ 0.7
COL9A1-201ENST00000320755 SMCR8Q8TEV9 937 aaPredicted RBP19.41■□□□□ 0.7
COL9A1-201ENST00000320755 LARP4BQ92615 738 aaKnown RBP19.41■□□□□ 0.7
COL9A1-201ENST00000320755 PNMA5Q96PV4 448 aa19.41■□□□□ 0.7
COL9A1-201ENST00000320755 TBC1D7Q9P0N9 293 aa19.41■□□□□ 0.7
COL9A1-201ENST00000320755 KRT86O43790 486 aa19.41■□□□□ 0.7
COL9A1-201ENST00000320755 PHACTR2O75167 634 aa19.41■□□□□ 0.7
COL9A1-201ENST00000320755 ERLIN1O75477 346 aa19.41■□□□□ 0.7
COL9A1-201ENST00000320755 GYS1P13807 737 aa19.41■□□□□ 0.7
COL9A1-201ENST00000320755 TUBB2AQ13885 445 aa19.41■□□□□ 0.7
COL9A1-201ENST00000320755 KCNK18Q7Z418 384 aa19.41■□□□□ 0.7
COL9A1-201ENST00000320755 C2CD5Q86YS7 1000 aa19.41■□□□□ 0.7
COL9A1-201ENST00000320755 SLF2Q8IX21 1173 aa19.41■□□□□ 0.7
COL9A1-201ENST00000320755 GDAP1L1Q96MZ0 367 aa19.41■□□□□ 0.7
COL9A1-201ENST00000320755 MMS19Q96T76 1030 aa19.41■□□□□ 0.7
COL9A1-201ENST00000320755 TUBB2BQ9BVA1 445 aa19.41■□□□□ 0.7
COL9A1-201ENST00000320755 DDX4Q9NQI0 724 aaKnown RBP19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms