RNA–Protein interactions for RNA: ENST00000320081.9

CLIP4-201, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP4, Length 4,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-201ENST00000320081 FMR1Q06787 632 aaKnown RBP eCLIP18.17■□□□□ 0.5
CLIP4-201ENST00000320081 FBF1Q8TES7 1133 aa18.17■□□□□ 0.5
CLIP4-201ENST00000320081 TMEM47Q9BQJ4 181 aa18.17■□□□□ 0.5
CLIP4-201ENST00000320081 CALUO43852 315 aaPredicted RBP18.17■□□□□ 0.5
CLIP4-201ENST00000320081 EIF4A3P38919 411 aaKnown RBP18.17■□□□□ 0.5
CLIP4-201ENST00000320081 ZBTB16Q05516 673 aa18.17■□□□□ 0.5
CLIP4-201ENST00000320081 ODR4Q5SWX8 454 aa18.17■□□□□ 0.5
CLIP4-201ENST00000320081 SEL1L2Q5TEA6 688 aa18.17■□□□□ 0.5
CLIP4-201ENST00000320081 SH2D3AQ9BRG2 576 aa18.17■□□□□ 0.5
CLIP4-201ENST00000320081 ERVV-1B6SEH8 477 aa18.16■□□□□ 0.5
CLIP4-201ENST00000320081 TRIM58Q8NG06 486 aa18.16■□□□□ 0.5
CLIP4-201ENST00000320081 CCDC26Q8TAB7 109 aa18.16■□□□□ 0.5
CLIP4-201ENST00000320081 MTRF1LQ9UGC7 380 aaKnown RBP18.16■□□□□ 0.5
CLIP4-201ENST00000320081 KRIT1O00522 736 aa18.16■□□□□ 0.5
CLIP4-201ENST00000320081 TRAF1Q13077 416 aa18.16■□□□□ 0.5
CLIP4-201ENST00000320081 CDC42BPGQ6DT37 1551 aa18.16■□□□□ 0.5
CLIP4-201ENST00000320081 E7EVH7 732 aa18.16■□□□□ 0.5
CLIP4-201ENST00000320081 NDUFA10O95299 355 aa18.16■□□□□ 0.5
CLIP4-201ENST00000320081 CDC25BP30305 580 aa18.16■□□□□ 0.5
CLIP4-201ENST00000320081 GNGT1P63211 74 aa18.16■□□□□ 0.5
CLIP4-201ENST00000320081 FAM102BQ5T8I3 360 aa18.16■□□□□ 0.5
CLIP4-201ENST00000320081 BCAS4Q8TDM0 211 aa18.16■□□□□ 0.5
CLIP4-201ENST00000320081 PIGOQ8TEQ8 1089 aa18.16■□□□□ 0.5
CLIP4-201ENST00000320081 KRT26Q7Z3Y9 468 aa18.15■□□□□ 0.5
CLIP4-201ENST00000320081 CCDC63Q8NA47 563 aa18.15■□□□□ 0.5
CLIP4-201ENST00000320081 FAM84BQ96KN1 310 aaPredicted RBP18.15■□□□□ 0.5
CLIP4-201ENST00000320081 NT5C3AQ9H0P0 336 aa18.15■□□□□ 0.5
CLIP4-201ENST00000320081 FAM204AQ9H8W3 233 aa18.15■□□□□ 0.5
CLIP4-201ENST00000320081 TFR2Q9UP52 801 aa18.15■□□□□ 0.5
CLIP4-201ENST00000320081 KRT19P08727 400 aa18.15■□□□□ 0.5
CLIP4-201ENST00000320081 ATP2B4P23634 1241 aa18.15■□□□□ 0.5
CLIP4-201ENST00000320081 ZNF658Q5TYW1 1059 aaPredicted RBP18.15■□□□□ 0.5
CLIP4-201ENST00000320081 ANKRD42Q8N9B4 389 aa18.15■□□□□ 0.5
CLIP4-201ENST00000320081 MTUS1Q9ULD2 1270 aa18.15■□□□□ 0.5
CLIP4-201ENST00000320081 PRPF6O94906 941 aaKnown RBP18.15■□□□□ 0.5
CLIP4-201ENST00000320081 PNMA6AP0CW24 399 aaPredicted RBP18.15■□□□□ 0.5
CLIP4-201ENST00000320081 LIG3P49916 1009 aa18.15■□□□□ 0.5
CLIP4-201ENST00000320081 TXNRD1Q16881 649 aa18.15■□□□□ 0.5
CLIP4-201ENST00000320081 PNMA8AQ86V59 439 aaPredicted RBP18.15■□□□□ 0.5
CLIP4-201ENST00000320081 CCDC51Q96ER9 411 aa18.15■□□□□ 0.5
CLIP4-201ENST00000320081 OVOS2A0A0J9YW53 1432 aa18.15■□□□□ 0.5
CLIP4-201ENST00000320081 OVOS2Q6IE36 1432 aa18.15■□□□□ 0.5
CLIP4-201ENST00000320081 PPP1R2P41236 205 aa18.15■□□□□ 0.5
CLIP4-201ENST00000320081 GTF2A1P52655 376 aaPredicted RBP18.15■□□□□ 0.5
CLIP4-201ENST00000320081 TTC31Q49AM3 519 aaPredicted RBP18.15■□□□□ 0.5
CLIP4-201ENST00000320081 CCDC91Q7Z6B0 441 aa18.15■□□□□ 0.5
CLIP4-201ENST00000320081 STAG1Q8WVM7 1258 aa18.15■□□□□ 0.5
CLIP4-201ENST00000320081 RABGGTAQ92696 567 aa18.15■□□□□ 0.5
CLIP4-201ENST00000320081 IQCGQ9H095 443 aaKnown RBP18.15■□□□□ 0.5
CLIP4-201ENST00000320081 DISC1Q9NRI5 854 aa18.15■□□□□ 0.5
CLIP4-201ENST00000320081 BSDC1Q9NW68 430 aaPredicted RBP18.15■□□□□ 0.5
CLIP4-201ENST00000320081 SMTNP53814 917 aa18.14■□□□□ 0.49
CLIP4-201ENST00000320081 ZRSR2Q15696 482 aaKnown RBP18.14■□□□□ 0.49
CLIP4-201ENST00000320081 ABCB5Q2M3G0 1257 aa18.14■□□□□ 0.49
CLIP4-201ENST00000320081 CEP95Q96GE4 821 aa18.14■□□□□ 0.49
CLIP4-201ENST00000320081 EPB41L4AQ9HCS5 686 aaPredicted RBP18.14■□□□□ 0.49
CLIP4-201ENST00000320081 ABCB6Q9NP58 842 aa18.14■□□□□ 0.49
CLIP4-201ENST00000320081 UTP11Q9Y3A2 253 aaKnown RBP18.14■□□□□ 0.49
CLIP4-201ENST00000320081 K7ENM7 598 aa18.14■□□□□ 0.49
CLIP4-201ENST00000320081 EXOC3L4Q17RC7 722 aa18.14■□□□□ 0.49
CLIP4-201ENST00000320081 WHAMMP3Q1A5X7 153 aa18.14■□□□□ 0.49
CLIP4-201ENST00000320081 CPDO75976 1380 aa18.14■□□□□ 0.49
CLIP4-201ENST00000320081 ZBTB22O15209 634 aa18.14■□□□□ 0.49
CLIP4-201ENST00000320081 TUBBP07437 444 aa18.14■□□□□ 0.49
CLIP4-201ENST00000320081 CTNNA1P35221 906 aaKnown RBP18.14■□□□□ 0.49
CLIP4-201ENST00000320081 PPP2R5DQ14738 602 aa18.14■□□□□ 0.49
CLIP4-201ENST00000320081 BRD3Q15059 726 aa18.14■□□□□ 0.49
CLIP4-201ENST00000320081 E4F1Q66K89 784 aaPredicted RBP18.14■□□□□ 0.49
CLIP4-201ENST00000320081 SRBD1Q8N5C6 995 aaKnown RBP18.14■□□□□ 0.49
CLIP4-201ENST00000320081 ARFGAP2Q8N6H7 521 aa18.14■□□□□ 0.49
CLIP4-201ENST00000320081 SUGCTQ9HAC7 445 aa18.14■□□□□ 0.49
CLIP4-201ENST00000320081 VWA3BQ502W6 1294 aa18.13■□□□□ 0.49
CLIP4-201ENST00000320081 XKR9Q5GH70 373 aa18.13■□□□□ 0.49
CLIP4-201ENST00000320081 MIER3Q7Z3K6 550 aa18.13■□□□□ 0.49
CLIP4-201ENST00000320081 BHMT2Q9H2M3 363 aa18.13■□□□□ 0.49
CLIP4-201ENST00000320081 PTPN22Q9Y2R2 807 aa18.13■□□□□ 0.49
CLIP4-201ENST00000320081 FCER1AP12319 257 aa18.13■□□□□ 0.49
CLIP4-201ENST00000320081 PRPHP41219 470 aa18.13■□□□□ 0.49
CLIP4-201ENST00000320081 PAK2Q13177 524 aa18.13■□□□□ 0.49
CLIP4-201ENST00000320081 WDR44Q5JSH3 913 aa18.13■□□□□ 0.49
CLIP4-201ENST00000320081 EPB41L5Q9HCM4 733 aa18.13■□□□□ 0.49
CLIP4-201ENST00000320081 HYOU1Q9Y4L1 999 aa18.13■□□□□ 0.49
CLIP4-201ENST00000320081 IFNAR2P48551 515 aa18.13■□□□□ 0.49
CLIP4-201ENST00000320081 CCT5P48643 541 aa18.13■□□□□ 0.49
CLIP4-201ENST00000320081 CCDC6Q16204 474 aa18.13■□□□□ 0.49
CLIP4-201ENST00000320081 TCP11X2Q5H9J9 407 aa18.13■□□□□ 0.49
CLIP4-201ENST00000320081 ZNF365Q70YC5 407 aa18.13■□□□□ 0.49
CLIP4-201ENST00000320081 PAGR1Q9BTK6 254 aa18.13■□□□□ 0.49
CLIP4-201ENST00000320081 ESYT3A0FGR9 886 aa18.12■□□□□ 0.49
CLIP4-201ENST00000320081 MFAP3LO75121 409 aa18.12■□□□□ 0.49
CLIP4-201ENST00000320081 CABS1Q96KC9 395 aa18.12■□□□□ 0.49
CLIP4-201ENST00000320081 NHEJ1Q9H9Q4 299 aaPredicted RBP18.12■□□□□ 0.49
CLIP4-201ENST00000320081 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.12■□□□□ 0.49
CLIP4-201ENST00000320081 MROH7-TTC4A0A0A0MT08 1334 aa18.12■□□□□ 0.49
CLIP4-201ENST00000320081 H2AFZP0C0S5 128 aa18.12■□□□□ 0.49
CLIP4-201ENST00000320081 SARM1Q6SZW1 724 aa18.12■□□□□ 0.49
CLIP4-201ENST00000320081 H2AFVQ71UI9 128 aa18.12■□□□□ 0.49
CLIP4-201ENST00000320081 IGDCC4Q8TDY8 1250 aa18.12■□□□□ 0.49
CLIP4-201ENST00000320081 CCDC77Q9BR77 488 aa18.12■□□□□ 0.49
CLIP4-201ENST00000320081 MXRA7P84157 204 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms