RNA–Protein interactions for RNA: ENST00000317402.11

GEN1-201, Transcript of GEN1, Holliday junction 5' flap endonuclease, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GEN1, Length 9,854 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GEN1-201ENST00000317402 REXO1L1PQ8IX06 675 aa4.02□□□□□ -1.77
GEN1-201ENST00000317402 HAUS2Q9NVX0 235 aa4.02□□□□□ -1.77
GEN1-201ENST00000317402 MKRN1Q9UHC7 482 aaKnown RBP4.02□□□□□ -1.77
GEN1-201ENST00000317402 TSC2P49815 1807 aa4.01□□□□□ -1.77
GEN1-201ENST00000317402 VWA3AA6NCI4 1184 aa4.01□□□□□ -1.77
GEN1-201ENST00000317402 PRC1O43663 620 aa4.01□□□□□ -1.77
GEN1-201ENST00000317402 TRIM37O94972 964 aa4.01□□□□□ -1.77
GEN1-201ENST00000317402 RBL2Q08999 1139 aa4.01□□□□□ -1.77
GEN1-201ENST00000317402 IMMTQ16891 758 aaKnown RBP4.01□□□□□ -1.77
GEN1-201ENST00000317402 TAB3Q8N5C8 712 aaPredicted RBP4.01□□□□□ -1.77
GEN1-201ENST00000317402 SHKBP1Q8TBC3 707 aa4.01□□□□□ -1.77
GEN1-201ENST00000317402 ABTB1Q969K4 478 aaPredicted RBP4.01□□□□□ -1.77
GEN1-201ENST00000317402 LRRC45Q96CN5 670 aa4.01□□□□□ -1.77
GEN1-201ENST00000317402 NUDT12Q9BQG2 462 aa4.01□□□□□ -1.77
GEN1-201ENST00000317402 JPH2Q9BR39 696 aaPredicted RBP4.01□□□□□ -1.77
GEN1-201ENST00000317402 TRIM6Q9C030 488 aaPredicted RBP4.01□□□□□ -1.77
GEN1-201ENST00000317402 IQCGQ9H095 443 aaKnown RBP4.01□□□□□ -1.77
GEN1-201ENST00000317402 RNF8O76064 485 aa4.01□□□□□ -1.77
GEN1-201ENST00000317402 MBD4O95243 580 aa4.01□□□□□ -1.77
GEN1-201ENST00000317402 FILIP1LQ4L180 1135 aa4.01□□□□□ -1.77
GEN1-201ENST00000317402 MLXIPQ9HAP2 919 aa4.01□□□□□ -1.77
GEN1-201ENST00000317402 DONSONQ9NYP3 566 aa4.01□□□□□ -1.77
GEN1-201ENST00000317402 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.01□□□□□ -1.77
GEN1-201ENST00000317402 TET2Q6N021 2002 aaPredicted RBP4.01□□□□□ -1.77
GEN1-201ENST00000317402 ZNF532Q9HCE3 1301 aa4.01□□□□□ -1.77
GEN1-201ENST00000317402 PRDX5P30044 214 aa4.01□□□□□ -1.77
GEN1-201ENST00000317402 CCT4P50991 539 aaKnown RBP4.01□□□□□ -1.77
GEN1-201ENST00000317402 C2CD6Q53TS8 623 aa4.01□□□□□ -1.77
GEN1-201ENST00000317402 IFNL2Q8IZJ0 200 aa4.01□□□□□ -1.77
GEN1-201ENST00000317402 SH2D3CQ8N5H7 860 aa4.01□□□□□ -1.77
GEN1-201ENST00000317402 PLVAPQ9BX97 442 aa4.01□□□□□ -1.77
GEN1-201ENST00000317402 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.01□□□□□ -1.776e-6■■■□□ 19.2
GEN1-201ENST00000317402 MMRN2Q9H8L6 949 aa4.01□□□□□ -1.77
GEN1-201ENST00000317402 PKD2L1Q9P0L9 805 aa4.01□□□□□ -1.77
GEN1-201ENST00000317402 PCDH15Q96QU1 1955 aa4.01□□□□□ -1.77
GEN1-201ENST00000317402 LRRIQ3A6PVS8 624 aaPredicted RBP4.01□□□□□ -1.77
GEN1-201ENST00000317402 BLOC1S2Q6QNY1 142 aa4.01□□□□□ -1.77
GEN1-201ENST00000317402 PPFIBP2Q8ND30 876 aa4.01□□□□□ -1.77
GEN1-201ENST00000317402 GOLGA5Q8TBA6 731 aa4.01□□□□□ -1.77
GEN1-201ENST00000317402 ZNF668Q96K58 619 aaPredicted RBP4.01□□□□□ -1.77
GEN1-201ENST00000317402 PGLYRP2Q96PD5 576 aa4.01□□□□□ -1.77
GEN1-201ENST00000317402 ARFGAP3Q9NP61 516 aa4.01□□□□□ -1.77
GEN1-201ENST00000317402 DENND4CQ5VZ89 1909 aa4.01□□□□□ -1.77
GEN1-201ENST00000317402 FLT4P35916 1363 aa4.01□□□□□ -1.77
GEN1-201ENST00000317402 PARP14Q460N5 1801 aa4.01□□□□□ -1.77
GEN1-201ENST00000317402 NOTCH4Q99466 2003 aa4.01□□□□□ -1.77
GEN1-201ENST00000317402 USP17L3A6NCW0 530 aa4.01□□□□□ -1.77
GEN1-201ENST00000317402 USP17L4A6NCW7 530 aa4.01□□□□□ -1.77
GEN1-201ENST00000317402 RASSF10A6NK89 507 aa4.01□□□□□ -1.77
GEN1-201ENST00000317402 A6NNZ2 444 aa4.01□□□□□ -1.77
GEN1-201ENST00000317402 RAD17O75943 681 aa4.01□□□□□ -1.77
GEN1-201ENST00000317402 Q3C1V9 767 aa4.01□□□□□ -1.77
GEN1-201ENST00000317402 TUBB8Q3ZCM7 444 aa4.01□□□□□ -1.77
GEN1-201ENST00000317402 CCDC38Q502W7 563 aa4.01□□□□□ -1.77
GEN1-201ENST00000317402 LLGL2Q6P1M3 1020 aa4.01□□□□□ -1.77
GEN1-201ENST00000317402 USP17L1Q7RTZ2 530 aa4.01□□□□□ -1.77
GEN1-201ENST00000317402 LRRC43Q8N309 656 aa4.01□□□□□ -1.77
GEN1-201ENST00000317402 KIF1BPQ96EK5 621 aa4.01□□□□□ -1.77
GEN1-201ENST00000317402 ZNF396Q96N95 335 aaPredicted RBP4.01□□□□□ -1.77
GEN1-201ENST00000317402 CLSTN2Q9H4D0 955 aa4.01□□□□□ -1.77
GEN1-201ENST00000317402 ACP6Q9NPH0 428 aa4.01□□□□□ -1.77
GEN1-201ENST00000317402 FAN1Q9Y2M0 1017 aa4.01□□□□□ -1.77
GEN1-201ENST00000317402 OVOS2A0A0J9YW53 1432 aa4.01□□□□□ -1.77
GEN1-201ENST00000317402 OVOS2Q6IE36 1432 aa4.01□□□□□ -1.77
GEN1-201ENST00000317402 SOS2Q07890 1332 aaPredicted RBP4.01□□□□□ -1.77
GEN1-201ENST00000317402 OPLAHO14841 1288 aa4.01□□□□□ -1.77
GEN1-201ENST00000317402 PLS1Q14651 629 aa4.01□□□□□ -1.77
GEN1-201ENST00000317402 ZSWIM5Q9P217 1185 aa4.01□□□□□ -1.77
GEN1-201ENST00000317402 PRRC2AP48634 2157 aaKnown RBP4.01□□□□□ -1.77
GEN1-201ENST00000317402 PTPRDP23468 1912 aa4.01□□□□□ -1.77
GEN1-201ENST00000317402 ERVK-24P63145 666 aa4.01□□□□□ -1.77
GEN1-201ENST00000317402 NAP1L3Q99457 506 aaPredicted RBP4.01□□□□□ -1.77
GEN1-201ENST00000317402 ITGB4P16144 1822 aa4.01□□□□□ -1.77
GEN1-201ENST00000317402 ANAPC1Q9H1A4 1944 aa4.01□□□□□ -1.77
GEN1-201ENST00000317402 GOLGA8BA8MQT2 603 aa4.01□□□□□ -1.77
GEN1-201ENST00000317402 ZFXP17010 805 aaPredicted RBP4.01□□□□□ -1.77
GEN1-201ENST00000317402 PCK1P35558 622 aa4.01□□□□□ -1.77
GEN1-201ENST00000317402 PPP4R4Q6NUP7 873 aa4.01□□□□□ -1.77
GEN1-201ENST00000317402 CCDC150Q8NCX0 1101 aa4.01□□□□□ -1.77
GEN1-201ENST00000317402 GBP5Q96PP8 586 aa4.01□□□□□ -1.77
GEN1-201ENST00000317402 PAG1Q9NWQ8 432 aa4.01□□□□□ -1.77
GEN1-201ENST00000317402 DBF4Q9UBU7 674 aaPredicted RBP4.01□□□□□ -1.77
GEN1-201ENST00000317402 SPTBN5Q9NRC6 3674 aaKnown RBP4.01□□□□□ -1.77
GEN1-201ENST00000317402 RGPD3A6NKT7 1758 aaPredicted RBP4□□□□□ -1.77
GEN1-201ENST00000317402 RGPD4Q7Z3J3 1758 aa4□□□□□ -1.77
GEN1-201ENST00000317402 SFI1A8K8P3 1242 aa4□□□□□ -1.77
GEN1-201ENST00000317402 FCER1AP12319 257 aa4□□□□□ -1.77
GEN1-201ENST00000317402 JAG1P78504 1218 aa4□□□□□ -1.77
GEN1-201ENST00000317402 SYCP2LQ5T4T6 812 aa4□□□□□ -1.77
GEN1-201ENST00000317402 FAM47EQ6ZV65 393 aa4□□□□□ -1.77
GEN1-201ENST00000317402 ZFPM1Q8IX07 1006 aa4□□□□□ -1.77
GEN1-201ENST00000317402 TGFBRAP1Q8WUH2 860 aa4□□□□□ -1.77
GEN1-201ENST00000317402 MPHOSPH6Q99547 160 aaKnown RBP4□□□□□ -1.77
GEN1-201ENST00000317402 UBR2Q8IWV8 1755 aa4□□□□□ -1.77
GEN1-201ENST00000317402 RFX7Q2KHR2 1363 aa4□□□□□ -1.77
GEN1-201ENST00000317402 MCM6Q14566 821 aa4□□□□□ -1.77
GEN1-201ENST00000317402 TRIM65Q6PJ69 517 aa4□□□□□ -1.77
GEN1-201ENST00000317402 NETO2Q8NC67 525 aa4□□□□□ -1.77
GEN1-201ENST00000317402 ARMC2Q8NEN0 867 aa4□□□□□ -1.77
GEN1-201ENST00000317402 MTFR1LQ9H019 292 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms