RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 SUPT20HQ8NEM7 779 aa8.89□□□□□ -0.99
CNOT4-201ENST00000315544 SUGCTQ9HAC7 445 aa8.89□□□□□ -0.99
CNOT4-201ENST00000315544 AJAP1Q9UKB5 411 aaPredicted RBP8.89□□□□□ -0.99
CNOT4-201ENST00000315544 PLAGL2Q9UPG8 496 aa8.89□□□□□ -0.99
CNOT4-201ENST00000315544 SEC31AO94979 1220 aaKnown RBP8.88□□□□□ -0.99
CNOT4-201ENST00000315544 PRDX5P30044 214 aa8.88□□□□□ -0.99
CNOT4-201ENST00000315544 TXLNAP40222 546 aa8.88□□□□□ -0.99
CNOT4-201ENST00000315544 ADKP55263 362 aaKnown RBP8.88□□□□□ -0.99
CNOT4-201ENST00000315544 RAB11FIP4Q86YS3 637 aa8.88□□□□□ -0.99
CNOT4-201ENST00000315544 MREGQ8N565 214 aa8.88□□□□□ -0.99
CNOT4-201ENST00000315544 RUBCNQ92622 972 aa8.88□□□□□ -0.99
CNOT4-201ENST00000315544 NUDT12Q9BQG2 462 aa8.88□□□□□ -0.99
CNOT4-201ENST00000315544 THAP9Q9H5L6 903 aa8.88□□□□□ -0.99
CNOT4-201ENST00000315544 ATP8A2Q9NTI2 1148 aa8.88□□□□□ -0.99
CNOT4-201ENST00000315544 TTC26A0AVF1 554 aa8.88□□□□□ -0.99
CNOT4-201ENST00000315544 SPDYE4A6NLX3 237 aa8.88□□□□□ -0.99
CNOT4-201ENST00000315544 KLK7P49862 253 aa8.88□□□□□ -0.99
CNOT4-201ENST00000315544 PTPN14Q15678 1187 aa8.88□□□□□ -0.99
CNOT4-201ENST00000315544 BMT2Q1RMZ1 405 aa8.88□□□□□ -0.99
CNOT4-201ENST00000315544 USP50Q70EL3 339 aaPredicted RBP8.88□□□□□ -0.99
CNOT4-201ENST00000315544 SRGAP1Q7Z6B7 1085 aa8.88□□□□□ -0.99
CNOT4-201ENST00000315544 CERS5Q8N5B7 392 aa8.88□□□□□ -0.99
CNOT4-201ENST00000315544 ETNPPLQ8TBG4 499 aa8.88□□□□□ -0.99
CNOT4-201ENST00000315544 SRRTQ9BXP5 876 aaKnown RBP8.88□□□□□ -0.99
CNOT4-201ENST00000315544 VSNL1P62760 191 aa8.88□□□□□ -0.99
CNOT4-201ENST00000315544 CBX1P83916 185 aa8.88□□□□□ -0.99
CNOT4-201ENST00000315544 C6orf89Q6UWU4 347 aa8.88□□□□□ -0.99
CNOT4-201ENST00000315544 MB21D1Q8N884 522 aa8.88□□□□□ -0.99
CNOT4-201ENST00000315544 GTPBP6O43824 516 aaPredicted RBP8.87□□□□□ -0.99
CNOT4-201ENST00000315544 PRDM1O75626 825 aa8.87□□□□□ -0.99
CNOT4-201ENST00000315544 LONP1P36776 959 aaKnown RBP8.87□□□□□ -0.99
CNOT4-201ENST00000315544 ME1P48163 572 aa8.87□□□□□ -0.99
CNOT4-201ENST00000315544 DHX8Q14562 1220 aaKnown RBP8.87□□□□□ -0.99
CNOT4-201ENST00000315544 SH3BP5LQ7L8J4 393 aa8.87□□□□□ -0.99
CNOT4-201ENST00000315544 TMC6Q7Z403 805 aa8.87□□□□□ -0.99
CNOT4-201ENST00000315544 TRIM9Q9C026 710 aa8.87□□□□□ -0.99
CNOT4-201ENST00000315544 GDF3Q9NR23 364 aa8.87□□□□□ -0.99
CNOT4-201ENST00000315544 HSP90B1P14625 803 aaKnown RBP8.87□□□□□ -0.99
CNOT4-201ENST00000315544 GYG1P46976 350 aa8.87□□□□□ -0.99
CNOT4-201ENST00000315544 TDO2P48775 406 aa8.87□□□□□ -0.99
CNOT4-201ENST00000315544 HIRAP54198 1017 aaPredicted RBP8.87□□□□□ -0.99
CNOT4-201ENST00000315544 IRX5P78411 483 aaPredicted RBP8.87□□□□□ -0.99
CNOT4-201ENST00000315544 PTGDRQ13258 359 aa8.87□□□□□ -0.99
CNOT4-201ENST00000315544 FKBP1CQ5VVH2 108 aa8.87□□□□□ -0.99
CNOT4-201ENST00000315544 TRMT44Q8IYL2 757 aaKnown RBP8.87□□□□□ -0.99
CNOT4-201ENST00000315544 SMYD4Q8IYR2 804 aaPredicted RBP8.87□□□□□ -0.99
CNOT4-201ENST00000315544 TMTC2Q8N394 836 aa8.87□□□□□ -0.99
CNOT4-201ENST00000315544 MMGT1Q8N4V1 131 aa8.87□□□□□ -0.99
CNOT4-201ENST00000315544 MKL1Q969V6 931 aa8.87□□□□□ -0.99
CNOT4-201ENST00000315544 INPP4AQ96PE3 977 aaPredicted RBP8.87□□□□□ -0.99
CNOT4-201ENST00000315544 RBM28Q9NW13 759 aaKnown RBP8.87□□□□□ -0.99
CNOT4-201ENST00000315544 PCDHA4Q9UN74 947 aa8.87□□□□□ -0.99
CNOT4-201ENST00000315544 SRCAPQ6ZRS2 3230 aa8.87□□□□□ -0.99
CNOT4-201ENST00000315544 DHX16O60231 1041 aaKnown RBP8.87□□□□□ -0.99
CNOT4-201ENST00000315544 ZEB2O60315 1214 aa8.87□□□□□ -0.99
CNOT4-201ENST00000315544 ATP2B4P23634 1241 aa8.87□□□□□ -0.99
CNOT4-201ENST00000315544 FOXR1Q6PIV2 292 aa8.87□□□□□ -0.99
CNOT4-201ENST00000315544 IQCKQ8N0W5 287 aa8.87□□□□□ -0.99
CNOT4-201ENST00000315544 BAG1Q99933 345 aaPredicted RBP8.87□□□□□ -0.99
CNOT4-201ENST00000315544 VPS54Q9P1Q0 977 aa8.87□□□□□ -0.99
CNOT4-201ENST00000315544 PCDHGC5Q9Y5F6 944 aa8.87□□□□□ -0.99
CNOT4-201ENST00000315544 SCG2P13521 617 aa8.86□□□□□ -0.99
CNOT4-201ENST00000315544 UBASH3AP57075 661 aa8.86□□□□□ -0.99
CNOT4-201ENST00000315544 CEBPZQ03701 1054 aaKnown RBP8.86□□□□□ -0.99
CNOT4-201ENST00000315544 NBPF5PQ86XG9 351 aaPredicted RBP8.86□□□□□ -0.99
CNOT4-201ENST00000315544 CD302Q8IX05 232 aa8.86□□□□□ -0.99
CNOT4-201ENST00000315544 AGPAT5Q9NUQ2 364 aa8.86□□□□□ -0.99
CNOT4-201ENST00000315544 GPRC5DQ9NZD1 345 aa8.86□□□□□ -0.99
CNOT4-201ENST00000315544 ZNF112Q9UJU3 913 aa8.86□□□□□ -0.99
CNOT4-201ENST00000315544 CDC23Q9UJX2 597 aa8.86□□□□□ -0.99
CNOT4-201ENST00000315544 FBXL5Q9UKA1 691 aa8.86□□□□□ -0.99
CNOT4-201ENST00000315544 DUSP10Q9Y6W6 482 aa8.86□□□□□ -0.99
CNOT4-201ENST00000315544 COL4A6Q14031 1691 aa8.86□□□□□ -0.99
CNOT4-201ENST00000315544 EIF3CLB5ME19 914 aaKnown RBP8.86□□□□□ -0.99
CNOT4-201ENST00000315544 CES2O00748 559 aa8.86□□□□□ -0.99
CNOT4-201ENST00000315544 CASP14P31944 242 aa8.86□□□□□ -0.99
CNOT4-201ENST00000315544 METTL24Q5JXM2 366 aa8.86□□□□□ -0.99
CNOT4-201ENST00000315544 EIF3CQ99613 913 aaKnown RBP8.86□□□□□ -0.99
CNOT4-201ENST00000315544 TFR2Q9UP52 801 aa8.86□□□□□ -0.99
CNOT4-201ENST00000315544 GDAQ9Y2T3 454 aa8.86□□□□□ -0.99
CNOT4-201ENST00000315544 MYLKQ15746 1914 aa8.86□□□□□ -0.99
CNOT4-201ENST00000315544 A0A0G2JS52 829 aa8.86□□□□□ -0.99
CNOT4-201ENST00000315544 SLC12A3P55017 1021 aa8.86□□□□□ -0.99
CNOT4-201ENST00000315544 STK4Q13043 487 aa8.86□□□□□ -0.99
CNOT4-201ENST00000315544 RRP1BQ14684 758 aaKnown RBP8.86□□□□□ -0.99
CNOT4-201ENST00000315544 TMEM67Q5HYA8 995 aa8.86□□□□□ -0.99
CNOT4-201ENST00000315544 C9orf131Q5VYM1 1079 aa8.86□□□□□ -0.99
CNOT4-201ENST00000315544 ANKRD40Q6AI12 368 aa8.86□□□□□ -0.99
CNOT4-201ENST00000315544 TATDN1Q6P1N9 297 aa8.86□□□□□ -0.99
CNOT4-201ENST00000315544 IRF2BP2Q7Z5L9 587 aa8.86□□□□□ -0.99
CNOT4-201ENST00000315544 ZDHHC14Q8IZN3 488 aa8.86□□□□□ -0.99
CNOT4-201ENST00000315544 CAVIN3Q969G5 261 aa8.86□□□□□ -0.99
CNOT4-201ENST00000315544 TEPSINQ96N21 525 aa8.86□□□□□ -0.99
CNOT4-201ENST00000315544 TAF1DQ9H5J8 278 aaPredicted RBP8.86□□□□□ -0.99
CNOT4-201ENST00000315544 HPCAL4Q9UM19 191 aa8.86□□□□□ -0.99
CNOT4-201ENST00000315544 ATG2AQ2TAZ0 1938 aa8.85□□□□□ -0.99
CNOT4-201ENST00000315544 PP2D1A8MPX8 630 aa8.85□□□□□ -0.99
CNOT4-201ENST00000315544 SLC37A4O43826 429 aa8.85□□□□□ -0.99
CNOT4-201ENST00000315544 KINO60870 393 aaKnown RBP8.85□□□□□ -0.99
CNOT4-201ENST00000315544 USP14P54578 494 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms