RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 CRISPLD2Q9H0B8 497 aa13.98□□□□□ -0.17
SCFD1-201ENST00000311943 FBXO40Q9UH90 709 aa13.98□□□□□ -0.17
SCFD1-201ENST00000311943 GOLGA8AA7E2F4 631 aa13.98□□□□□ -0.17
SCFD1-201ENST00000311943 GOLGA8BA8MQT2 603 aa13.98□□□□□ -0.17
SCFD1-201ENST00000311943 LARGE1O95461 756 aa13.98□□□□□ -0.17
SCFD1-201ENST00000311943 ADCYAP1R1P41586 468 aa13.98□□□□□ -0.17
SCFD1-201ENST00000311943 SYTL5Q8TDW5 730 aaPredicted RBP13.98□□□□□ -0.17
SCFD1-201ENST00000311943 PPP1R13LQ8WUF5 828 aa13.98□□□□□ -0.17
SCFD1-201ENST00000311943 PHKBQ93100 1093 aa13.98□□□□□ -0.17
SCFD1-201ENST00000311943 AMNQ9BXJ7 453 aa13.98□□□□□ -0.17
SCFD1-201ENST00000311943 DDX20Q9UHI6 824 aaKnown RBP13.98□□□□□ -0.17
SCFD1-201ENST00000311943 WDR19Q8NEZ3 1342 aa13.98□□□□□ -0.17
SCFD1-201ENST00000311943 PDIA3P30101 505 aaKnown RBP13.97□□□□□ -0.17
SCFD1-201ENST00000311943 MLLT1Q03111 559 aaPredicted RBP13.97□□□□□ -0.17
SCFD1-201ENST00000311943 USP17L6PQ6QN14 398 aa13.97□□□□□ -0.17
SCFD1-201ENST00000311943 UBE2Q1Q7Z7E8 422 aa13.97□□□□□ -0.17
SCFD1-201ENST00000311943 IL31RAQ8NI17 732 aa13.97□□□□□ -0.17
SCFD1-201ENST00000311943 KIF2CQ99661 725 aa13.97□□□□□ -0.17
SCFD1-201ENST00000311943 AGXT2Q9BYV1 514 aa13.97□□□□□ -0.17
SCFD1-201ENST00000311943 V9GY48 417 aaPredicted RBP13.97□□□□□ -0.17
SCFD1-201ENST00000311943 CNTNAP5Q8WYK1 1306 aa13.97□□□□□ -0.17
SCFD1-201ENST00000311943 FRMPD3Q5JV73 1810 aa13.97□□□□□ -0.17
SCFD1-201ENST00000311943 ALDH5A1P51649 535 aaPredicted RBP13.97□□□□□ -0.17
SCFD1-201ENST00000311943 ACVR2BQ13705 512 aa13.97□□□□□ -0.17
SCFD1-201ENST00000311943 RTN1Q16799 776 aa13.97□□□□□ -0.17
SCFD1-201ENST00000311943 MAMDC4Q6UXC1 1216 aa13.97□□□□□ -0.17
SCFD1-201ENST00000311943 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.97□□□□□ -0.17
SCFD1-201ENST00000311943 FCHSD1Q86WN1 690 aa13.97□□□□□ -0.17
SCFD1-201ENST00000311943 TMTC2Q8N394 836 aa13.97□□□□□ -0.17
SCFD1-201ENST00000311943 MTA3Q9BTC8 594 aa13.97□□□□□ -0.17
SCFD1-201ENST00000311943 PFASO15067 1338 aa13.96□□□□□ -0.17
SCFD1-201ENST00000311943 PNMA6FA0A0J9YX94 578 aa13.96□□□□□ -0.17
SCFD1-201ENST00000311943 SORBS3O60504 671 aa13.96□□□□□ -0.17
SCFD1-201ENST00000311943 EIF2AK2P19525 551 aaKnown RBP13.96□□□□□ -0.17
SCFD1-201ENST00000311943 COPB2P35606 906 aa13.96□□□□□ -0.17
SCFD1-201ENST00000311943 TKFCQ3LXA3 575 aa13.96□□□□□ -0.17
SCFD1-201ENST00000311943 CCDC144BQ3MJ40 725 aa13.96□□□□□ -0.17
SCFD1-201ENST00000311943 COPS5Q92905 334 aa13.96□□□□□ -0.17
SCFD1-201ENST00000311943 FERMT2Q96AC1 680 aa13.96□□□□□ -0.17
SCFD1-201ENST00000311943 PDRG1Q9NUG6 133 aa13.96□□□□□ -0.17
SCFD1-201ENST00000311943 OGDHLQ9ULD0 1010 aa13.96□□□□□ -0.17
SCFD1-201ENST00000311943 TPCN1Q9ULQ1 816 aa13.96□□□□□ -0.17
SCFD1-201ENST00000311943 DIS3Q9Y2L1 958 aaKnown RBP13.96□□□□□ -0.17
SCFD1-201ENST00000311943 HMGB1P09429 215 aaKnown RBP13.95□□□□□ -0.18
SCFD1-201ENST00000311943 AK2P54819 239 aa13.95□□□□□ -0.18
SCFD1-201ENST00000311943 UBE2SQ16763 222 aa13.95□□□□□ -0.18
SCFD1-201ENST00000311943 TAPT1Q6NXT6 567 aa13.95□□□□□ -0.18
SCFD1-201ENST00000311943 PGBD1Q96JS3 809 aa13.95□□□□□ -0.18
SCFD1-201ENST00000311943 SPZ1Q9BXG8 430 aa13.95□□□□□ -0.18
SCFD1-201ENST00000311943 BCAS3Q9H6U6 928 aa13.95□□□□□ -0.18
SCFD1-201ENST00000311943 SLC5A4Q9NY91 659 aa13.95□□□□□ -0.18
SCFD1-201ENST00000311943 CYP46A1Q9Y6A2 500 aa13.95□□□□□ -0.18
SCFD1-201ENST00000311943 LAMA3Q16787 3333 aa13.95□□□□□ -0.18
SCFD1-201ENST00000311943 ABCB11O95342 1321 aa13.95□□□□□ -0.18
SCFD1-201ENST00000311943 SEPT4O43236 478 aa13.95□□□□□ -0.18
SCFD1-201ENST00000311943 FARP2O94887 1054 aaPredicted RBP13.95□□□□□ -0.18
SCFD1-201ENST00000311943 PSMA5P28066 241 aa13.95□□□□□ -0.18
SCFD1-201ENST00000311943 KIF5BP33176 963 aa13.95□□□□□ -0.18
SCFD1-201ENST00000311943 METAP2P50579 478 aaKnown RBP eCLIP13.95□□□□□ -0.18
SCFD1-201ENST00000311943 WWC2Q6AWC2 1192 aa13.95□□□□□ -0.18
SCFD1-201ENST00000311943 AIFM3Q96NN9 605 aa13.95□□□□□ -0.18
SCFD1-201ENST00000311943 ARIH2O95376 493 aa13.94□□□□□ -0.18
SCFD1-201ENST00000311943 ATN1P54259 1190 aaPredicted RBP13.94□□□□□ -0.18
SCFD1-201ENST00000311943 BEX3Q00994 111 aa13.94□□□□□ -0.18
SCFD1-201ENST00000311943 NTRK3Q16288 839 aa13.94□□□□□ -0.18
SCFD1-201ENST00000311943 SYNE3Q6ZMZ3 975 aa13.94□□□□□ -0.18
SCFD1-201ENST00000311943 HEATR3Q7Z4Q2 680 aa13.94□□□□□ -0.18
SCFD1-201ENST00000311943 TRMT44Q8IYL2 757 aaKnown RBP13.94□□□□□ -0.18
SCFD1-201ENST00000311943 NECAB1Q8N987 351 aa13.94□□□□□ -0.18
SCFD1-201ENST00000311943 RRP36Q96EU6 259 aaKnown RBP13.94□□□□□ -0.18
SCFD1-201ENST00000311943 MAP3K14Q99558 947 aa13.94□□□□□ -0.18
SCFD1-201ENST00000311943 GJB4Q9NTQ9 266 aa13.94□□□□□ -0.18
SCFD1-201ENST00000311943 CNPY2Q9Y2B0 182 aa13.94□□□□□ -0.18
SCFD1-201ENST00000311943 TELO2Q9Y4R8 837 aa13.94□□□□□ -0.18
SCFD1-201ENST00000311943 LAMA2P24043 3122 aaKnown RBP13.94□□□□□ -0.18
SCFD1-201ENST00000311943 SMPD1P17405 629 aa13.93□□□□□ -0.18
SCFD1-201ENST00000311943 PKN1Q16512 942 aa13.93□□□□□ -0.18
SCFD1-201ENST00000311943 LRRC37A2A6NM11 1700 aa13.93□□□□□ -0.18
SCFD1-201ENST00000311943 SYNGAP1Q96PV0 1343 aa13.93□□□□□ -0.18
SCFD1-201ENST00000311943 MEIS2O14770 477 aa13.93□□□□□ -0.18
SCFD1-201ENST00000311943 CTAGE5O15320 804 aa13.93□□□□□ -0.18
SCFD1-201ENST00000311943 CALM1P0DP23 149 aa13.93□□□□□ -0.18
SCFD1-201ENST00000311943 CALM2P0DP24 149 aa13.93□□□□□ -0.18
SCFD1-201ENST00000311943 CALM3P0DP25 149 aa13.93□□□□□ -0.18
SCFD1-201ENST00000311943 HSD17B4P51659 736 aa13.93□□□□□ -0.18
SCFD1-201ENST00000311943 ST3GAL1Q11201 340 aa13.93□□□□□ -0.18
SCFD1-201ENST00000311943 ZNF467Q7Z7K2 595 aaPredicted RBP13.93□□□□□ -0.18
SCFD1-201ENST00000311943 RMDN3Q96TC7 470 aa13.93□□□□□ -0.18
SCFD1-201ENST00000311943 TM6SF1Q9BZW5 370 aa13.93□□□□□ -0.18
SCFD1-201ENST00000311943 XPNPEP3Q9NQH7 507 aa13.93□□□□□ -0.18
SCFD1-201ENST00000311943 TMEM260Q9NX78 707 aa13.93□□□□□ -0.18
SCFD1-201ENST00000311943 MRPL11Q9Y3B7 192 aaKnown RBP13.93□□□□□ -0.18
SCFD1-201ENST00000311943 ALPK3Q96L96 1907 aa13.92□□□□□ -0.18
SCFD1-201ENST00000311943 PDE4DIPQ5VU43 2346 aa13.92□□□□□ -0.18
SCFD1-201ENST00000311943 RGS20O76081 388 aa13.92□□□□□ -0.18
SCFD1-201ENST00000311943 NEK4P51957 841 aa13.92□□□□□ -0.18
SCFD1-201ENST00000311943 SCRN1Q12765 414 aa13.92□□□□□ -0.18
SCFD1-201ENST00000311943 LRRC41Q15345 812 aa13.92□□□□□ -0.18
SCFD1-201ENST00000311943 SENP6Q9GZR1 1112 aaPredicted RBP13.92□□□□□ -0.18
SCFD1-201ENST00000311943 ABHD16BQ9H3Z7 469 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms